BLASTX nr result
ID: Coptis25_contig00022430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00022430
(490 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi... 74 6e-21
ref|XP_002439601.1| hypothetical protein SORBIDRAFT_09g016165 [S... 58 4e-16
ref|XP_002444350.1| hypothetical protein SORBIDRAFT_07g020550 [S... 54 4e-15
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 69 9e-15
gb|EFR27663.1| hypothetical protein AND_05499 [Anopheles darlingi] 60 9e-15
>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
Length = 909
Score = 74.3 bits (181), Expect(2) = 6e-21
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = -1
Query: 286 FIFERIFVHIDDDLANGRNGVYTYHARGAIYHRIGGLLPRPGDR-PRYLQMYIYDTDHEL 110
F F + V +D NG +GVYT+ A+G IYHRI L +PGD PR+LQ+Y YDTD +L
Sbjct: 331 FAFTSLGVTLDQRYCNGSSGVYTFRAQGQIYHRIDQL--QPGDNGPRHLQLYFYDTDADL 388
Query: 109 EYRLTERKILDRRVLAILKKVLDSNNRFVHIFREI 5
+R LD V+ + +L+ +N +VH FR++
Sbjct: 389 SHRSRRSPDLDINVVRNILGILE-HNPYVHTFRQM 422
Score = 51.2 bits (121), Expect(2) = 6e-21
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -3
Query: 440 LRSFKTCHHCGAKLFPSETSSLCCLNGQVRLPLLAPPSELAYLYTSQS-ADGIHFRENIR 264
LR + C +CGAK F E+ + CC G++ P EL L+TSQ+ D +FRENIR
Sbjct: 266 LRPARNCSYCGAKRFQYESPAWCCRKGKIVFATHGVPDELHRLFTSQTDEDAKYFRENIR 325
Query: 263 SY 258
+
Sbjct: 326 YF 327
>ref|XP_002439601.1| hypothetical protein SORBIDRAFT_09g016165 [Sorghum bicolor]
gi|241944886|gb|EES18031.1| hypothetical protein
SORBIDRAFT_09g016165 [Sorghum bicolor]
Length = 521
Score = 58.2 bits (139), Expect(2) = 4e-16
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = -1
Query: 229 GVYTYHARGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHE--LEYRLTERKILDRRVLAIL 56
G+YT+ GA+YHR+ L+P PR+LQ+Y YDT+H+ L +R+ LD ++ +
Sbjct: 424 GIYTFRVHGALYHRLDHLVP-GSKGPRHLQLYFYDTEHDETLSHRVKRSPDLDINIVRNV 482
Query: 55 KKVLDSNNRFVHIFREI 5
++L N +V F +
Sbjct: 483 LRILQEGNPYVQTFNRV 499
Score = 51.2 bits (121), Expect(2) = 4e-16
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = -3
Query: 467 DSPYIELFQ--------LRSFKTCHHCGAKLFPSETSSLCCLNGQVRLPLLAPPSELAYL 312
D PY ++Q LR C HCGA F E+ CC G++++ + P EL L
Sbjct: 322 DDPYDFVYQNLPKGHHVLRKAPDCQHCGAMRFEGESPGFCCRMGKIKVHIPDVPDELKRL 381
Query: 311 YTSQ-SADGIHFRENIRSY 258
+TSQ D +FR++IR +
Sbjct: 382 FTSQVDIDAKYFRKHIRYF 400
>ref|XP_002444350.1| hypothetical protein SORBIDRAFT_07g020550 [Sorghum bicolor]
gi|241940700|gb|EES13845.1| hypothetical protein
SORBIDRAFT_07g020550 [Sorghum bicolor]
Length = 819
Score = 53.5 bits (127), Expect(2) = 4e-15
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Frame = -3
Query: 470 EDSPYIELFQ-------LRSFKTCHHCGAKLFPSETSSLCCLNGQVRLPLLAPPSELAYL 312
+D PY ++Q LR C HC A F ET CC G+V++ + P EL L
Sbjct: 195 DDDPYDFIYQNLPQRHILRQVPNCSHCHALRFQYETPRFCCRKGKVQICIQEVPEELKRL 254
Query: 311 YTSQ-SADGIHFRENIR 264
+TSQ D +FR+NIR
Sbjct: 255 FTSQVDVDAKYFRKNIR 271
Score = 52.4 bits (124), Expect(2) = 4e-15
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Frame = -1
Query: 286 FIFERIFVHIDDDLAN-GRNGVYTYHARGAIYHRIGGLLPRPGDRPRYLQMYIYDT-DHE 113
F F + V ID ++ G YT+ G +YHR+ L+ R GD R+LQ+Y YDT D +
Sbjct: 277 FSFTSLGVTIDRRYSSPAATGHYTFRIHGGLYHRLDHLV-RGGDNARHLQLYFYDTEDAD 335
Query: 112 LEYRLTERKILD---RRVLAILKKVLDSNNRFVHIFR 11
L R+ LD R++L IL++ N +VH FR
Sbjct: 336 LTRRVKRSSDLDIIIRQILQILQE-----NPYVHTFR 367
>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1427
Score = 69.3 bits (168), Expect(2) = 9e-15
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Frame = -1
Query: 253 DDLANGRNGVYTYHARGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHELEYRLTE------ 92
D+ N R G Y Y G YHRIGGL+P G +P++ Q+Y++DT++E++ RL+
Sbjct: 91 DNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQLYVHDTENEIQNRLSSLNGGKT 150
Query: 91 RKILDRRVLAILKKVLDSNNRFVHIFR 11
+ LD ++ LK +LD NN +FR
Sbjct: 151 ARDLDADIVRRLKDMLDMNNSVAKLFR 177
Score = 35.4 bits (80), Expect(2) = 9e-15
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Frame = -3
Query: 422 CHHCGAKLFPSE-----------TSSLCCLNGQVRLPLL-APPSELAYLYTSQSA-DGIH 282
C CG+ ++ +E T SLCCL G V L L PP L L + +
Sbjct: 10 CEKCGSTMWYNERADKPRRPRNPTFSLCCLKGDVSLEFLEQPPDYLKELLAYKGGRHSVK 69
Query: 281 FRENIRSY 258
FRE IR+Y
Sbjct: 70 FREKIRAY 77
>gb|EFR27663.1| hypothetical protein AND_05499 [Anopheles darlingi]
Length = 407
Score = 59.7 bits (143), Expect(2) = 9e-15
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = -1
Query: 253 DDLANGRNGVYTYHARGAIYHRIGGLLPRPGDRPRYLQMYIYD-TDHELEYRLTERKI-- 83
D+ G GVY Y +GA+ HRIGGL G P Y Q+Y YD D E R+ + ++
Sbjct: 199 DETVAGAGGVYNYRIQGALCHRIGGLGQLAGRTPMYAQLYFYDAADEEQRNRMVDARMSF 258
Query: 82 ---LDRRVLAILKKVLDSNNRFVHIF 14
LDR ++A L++V+ N +F
Sbjct: 259 FAGLDRNIVATLERVMHQYNPLAALF 284
Score = 45.1 bits (105), Expect(2) = 9e-15
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = -3
Query: 440 LRSFKTCHHCGAKLFPSETSSLCCLNGQVRLPLL-APPSELAYLYTSQS 297
L + ++C +CGA+ + ET +LCC GQV LP PP EL L+ +Q+
Sbjct: 121 LSALQSCAYCGAQKWAGETGTLCCNGGQVALPAYQEPPPELRELFRNQA 169