BLASTX nr result

ID: Coptis25_contig00022391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022391
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163020.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-lik...   148   4e-34
ref|XP_004148322.1| PREDICTED: villin-4-like [Cucumis sativus]        148   4e-34
ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
gb|ABK93411.1| unknown [Populus trichocarpa]                          141   6e-32

>ref|XP_004163020.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-like [Cucumis sativus]
          Length = 968

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/82 (82%), Positives = 76/82 (92%)
 Frame = +3

Query: 3   KFLQHDFLREKLSQEAPIFIITEGSEPPFFTRFFSWDSAKSAMHGNSFQRKLAIVKNGVT 182
           KFL+HDFL E LS +AP++IITEGSEPPFFTRFF WDSAKS+MHGNSFQRKL IVK+G T
Sbjct: 683 KFLEHDFLLENLSSKAPVYIITEGSEPPFFTRFFKWDSAKSSMHGNSFQRKLTIVKSGGT 742

Query: 183 PTLDKPKRRTPVSYGGRSSVPD 248
           PT+DKPKRRTPVSYGGRS+VPD
Sbjct: 743 PTVDKPKRRTPVSYGGRSAVPD 764


>ref|XP_004148322.1| PREDICTED: villin-4-like [Cucumis sativus]
          Length = 968

 Score =  148 bits (374), Expect = 4e-34
 Identities = 68/82 (82%), Positives = 76/82 (92%)
 Frame = +3

Query: 3   KFLQHDFLREKLSQEAPIFIITEGSEPPFFTRFFSWDSAKSAMHGNSFQRKLAIVKNGVT 182
           KFL+HDFL E LS +AP++IITEGSEPPFFTRFF WDSAKS+MHGNSFQRKL IVK+G T
Sbjct: 683 KFLEHDFLLENLSSKAPVYIITEGSEPPFFTRFFKWDSAKSSMHGNSFQRKLTIVKSGGT 742

Query: 183 PTLDKPKRRTPVSYGGRSSVPD 248
           PT+DKPKRRTPVSYGGRS+VPD
Sbjct: 743 PTVDKPKRRTPVSYGGRSAVPD 764


>ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|222870551|gb|EEF07682.1|
           predicted protein [Populus trichocarpa]
          Length = 977

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/82 (84%), Positives = 74/82 (90%)
 Frame = +3

Query: 3   KFLQHDFLREKLSQEAPIFIITEGSEPPFFTRFFSWDSAKSAMHGNSFQRKLAIVKNGVT 182
           KFL+HDFL EKLS E PI+I+ EGSEPPFFTRFF+WDSAKS MHGNSFQRKLAIVKNG T
Sbjct: 700 KFLEHDFLLEKLSSETPIYIVMEGSEPPFFTRFFTWDSAKSLMHGNSFQRKLAIVKNGGT 759

Query: 183 PTLDKPKRRTPVSYGGRSSVPD 248
             LDKPKRRTPVS+GGRSSVPD
Sbjct: 760 TLLDKPKRRTPVSHGGRSSVPD 781


>ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|222865895|gb|EEF03026.1|
           predicted protein [Populus trichocarpa]
          Length = 961

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/82 (82%), Positives = 74/82 (90%)
 Frame = +3

Query: 3   KFLQHDFLREKLSQEAPIFIITEGSEPPFFTRFFSWDSAKSAMHGNSFQRKLAIVKNGVT 182
           KFL+HDFL +K S E PI+I+ EGSEPPFFTRFF+WDSAKS+MHGNSFQRKLAIVKNG T
Sbjct: 684 KFLEHDFLLKKSSGETPIYIVMEGSEPPFFTRFFTWDSAKSSMHGNSFQRKLAIVKNGGT 743

Query: 183 PTLDKPKRRTPVSYGGRSSVPD 248
           P LDKPKRRT VSYGGRSSVPD
Sbjct: 744 PLLDKPKRRTAVSYGGRSSVPD 765


>gb|ABK93411.1| unknown [Populus trichocarpa]
          Length = 376

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/82 (81%), Positives = 73/82 (89%)
 Frame = +3

Query: 3   KFLQHDFLREKLSQEAPIFIITEGSEPPFFTRFFSWDSAKSAMHGNSFQRKLAIVKNGVT 182
           KFL+HDFL +K S E PI+I+ EGSEP FFTRFF+WDSAKS+MHGNSFQRKLAIVKNG T
Sbjct: 99  KFLEHDFLLKKSSGETPIYIVMEGSEPTFFTRFFTWDSAKSSMHGNSFQRKLAIVKNGGT 158

Query: 183 PTLDKPKRRTPVSYGGRSSVPD 248
           P LDKPKRRT VSYGGRSSVPD
Sbjct: 159 PLLDKPKRRTAVSYGGRSSVPD 180


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