BLASTX nr result
ID: Coptis25_contig00022386
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022386 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl... 129 2e-28 emb|CBI27426.3| unnamed protein product [Vitis vinifera] 129 2e-28 ref|XP_002514548.1| rubisco subunit binding-protein beta subunit... 127 7e-28 ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6... 123 1e-26 ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl... 123 1e-26 >ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis vinifera] Length = 610 Score = 129 bits (325), Expect = 2e-28 Identities = 62/80 (77%), Positives = 73/80 (91%) Frame = +2 Query: 77 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 256 LVDKK+ + K F+ILDNAVKEKYP+VI+AEGIE++AL P+IRNKLRG LKA AIKAPAF Sbjct: 248 LVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAF 307 Query: 257 GERKSHYLDDIAILTGGSVL 316 GERKSHYLDD+AILTGG+V+ Sbjct: 308 GERKSHYLDDLAILTGGTVI 327 >emb|CBI27426.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 129 bits (325), Expect = 2e-28 Identities = 62/80 (77%), Positives = 73/80 (91%) Frame = +2 Query: 77 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 256 LVDKK+ + K F+ILDNAVKEKYP+VI+AEGIE++AL P+IRNKLRG LKA AIKAPAF Sbjct: 222 LVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQEALAPVIRNKLRGVLKAAAIKAPAF 281 Query: 257 GERKSHYLDDIAILTGGSVL 316 GERKSHYLDD+AILTGG+V+ Sbjct: 282 GERKSHYLDDLAILTGGTVI 301 >ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco subunit binding-protein beta subunit, rubb, putative [Ricinus communis] Length = 592 Score = 127 bits (320), Expect = 7e-28 Identities = 61/80 (76%), Positives = 72/80 (90%) Frame = +2 Query: 77 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 256 LVDKK+ + K F+ILDNAVKEKYP+V++AEGIE++AL P+IRNKLRGALKA AIKAPAF Sbjct: 257 LVDKKITNPKEMFKILDNAVKEKYPIVVVAEGIEQEALAPVIRNKLRGALKAAAIKAPAF 316 Query: 257 GERKSHYLDDIAILTGGSVL 316 GERK HYLDDIAILTG +V+ Sbjct: 317 GERKGHYLDDIAILTGATVI 336 >ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 123 bits (309), Expect = 1e-26 Identities = 61/80 (76%), Positives = 69/80 (86%) Frame = +2 Query: 77 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 256 LVDKK+ K F+ILDNAVKEKYP+VI+AEGIE +AL P+IRNKLRG LKA AIKAPAF Sbjct: 269 LVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAF 328 Query: 257 GERKSHYLDDIAILTGGSVL 316 GERKSHYLDDIA LTG +V+ Sbjct: 329 GERKSHYLDDIATLTGATVV 348 >ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 123 bits (309), Expect = 1e-26 Identities = 61/80 (76%), Positives = 69/80 (86%) Frame = +2 Query: 77 LVDKKVIHLKYFFRILDNAVKEKYPVVIIAEGIEKDALTPLIRNKLRGALKAVAIKAPAF 256 LVDKK+ K F+ILDNAVKEKYP+VI+AEGIE +AL P+IRNKLRG LKA AIKAPAF Sbjct: 269 LVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEPEALAPVIRNKLRGVLKAAAIKAPAF 328 Query: 257 GERKSHYLDDIAILTGGSVL 316 GERKSHYLDDIA LTG +V+ Sbjct: 329 GERKSHYLDDIATLTGATVV 348