BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022374
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26532.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   136   2e-30
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   131   5e-29
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,...   127   7e-28
ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea ma...   123   1e-26

>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/159 (43%), Positives = 106/159 (66%), Gaps = 12/159 (7%)
 Frame = -1

Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336
           R GKLE  + L +E+++ G+E D+YTHTIL+DG+C++G+++GA RHLK M   GF S  V
Sbjct: 283 RNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLV 342

Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192
           A NC+++GLC+      A+K+F  ME KD FTYS      CKA+++  A+RL+   L   
Sbjct: 343 AQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGG 402

Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTRY 75
           +K+L++ Q++ + GL  +GY  EA +L+S I +A+   Y
Sbjct: 403 MKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 441


>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/159 (43%), Positives = 106/159 (66%), Gaps = 12/159 (7%)
 Frame = -1

Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336
           R GKLE  + L +E+++ G+E D+YTHTIL+DG+C++G+++GA RHLK M   GF S  V
Sbjct: 299 RNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLV 358

Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192
           A NC+++GLC+      A+K+F  ME KD FTYS      CKA+++  A+RL+   L   
Sbjct: 359 AQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGG 418

Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTRY 75
           +K+L++ Q++ + GL  +GY  EA +L+S I +A+   Y
Sbjct: 419 MKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 457


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/156 (42%), Positives = 105/156 (67%), Gaps = 12/156 (7%)
 Frame = -1

Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336
           R+G+L++A  L +E++  G+E DQYTHTI+VDG+C++G+ DGA+RHL  M   GF SN V
Sbjct: 304 RQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLV 363

Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192
           A NC L+GL +      A+++F  ME KD FTY+      C+A++F  A++++ + L   
Sbjct: 364 AFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCG 423

Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKY 84
            +VL++ Q+A + GLRS GY  EA +++  I +A++
Sbjct: 424 YQVLRATQRAVIVGLRSIGYANEARKVKLTIRLAQF 459


>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 487

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/155 (41%), Positives = 106/155 (68%), Gaps = 12/155 (7%)
 Frame = -1

Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336
           ++G LE A+ L +E++K G++ D+YTHTIL++ MC++G++ GA RH++ M M GF S  V
Sbjct: 329 KQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLV 388

Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192
           A NC+++GLC+      A+K+F  M+ +D FTYS      CK  +F  A++L+ + L   
Sbjct: 389 ALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSG 448

Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAK 87
           +K+L SAQ+  + GLR +G+++EA +L+S I +A+
Sbjct: 449 MKILPSAQRVVISGLRYSGFQKEARKLKSKIKLAR 483


>ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
           gi|238006488|gb|ACR34279.1| unknown [Zea mays]
           gi|413925463|gb|AFW65395.1| hypothetical protein
           ZEAMMB73_565010 [Zea mays]
          Length = 462

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/158 (39%), Positives = 104/158 (65%), Gaps = 12/158 (7%)
 Frame = -1

Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336
           +EGK+ +AF L N +++ G+ESD+YT +ILV+G+C+ G ++ AE+ +  MEM G +SN V
Sbjct: 304 QEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVV 363

Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192
           A NCL++ LC+      A+K+   M+ KDDF+Y+      CK  ++  A++ ++  L E 
Sbjct: 364 AYNCLIDALCKCHEVDAAIKILHSMKLKDDFSYTSLVHGLCKVGRYHMASKFLRICLHEG 423

Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTR 78
             VL SA++A + GLRS G+K +  +++SA+ +A+  R
Sbjct: 424 NNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARLLR 461