BLASTX nr result
ID: Coptis25_contig00022374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022374 (515 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26532.3| unnamed protein product [Vitis vinifera] 136 2e-30 ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 136 2e-30 ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat... 131 5e-29 ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 127 7e-28 ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea ma... 123 1e-26 >emb|CBI26532.3| unnamed protein product [Vitis vinifera] Length = 441 Score = 136 bits (342), Expect = 2e-30 Identities = 69/159 (43%), Positives = 106/159 (66%), Gaps = 12/159 (7%) Frame = -1 Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336 R GKLE + L +E+++ G+E D+YTHTIL+DG+C++G+++GA RHLK M GF S V Sbjct: 283 RNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLV 342 Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192 A NC+++GLC+ A+K+F ME KD FTYS CKA+++ A+RL+ L Sbjct: 343 AQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGG 402 Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTRY 75 +K+L++ Q++ + GL +GY EA +L+S I +A+ Y Sbjct: 403 MKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 441 >ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915-like [Vitis vinifera] Length = 457 Score = 136 bits (342), Expect = 2e-30 Identities = 69/159 (43%), Positives = 106/159 (66%), Gaps = 12/159 (7%) Frame = -1 Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336 R GKLE + L +E+++ G+E D+YTHTIL+DG+C++G+++GA RHLK M GF S V Sbjct: 299 RNGKLEATYKLLDEIEEHGLECDEYTHTILIDGLCKAGNVEGALRHLKNMTKMGFDSTLV 358 Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192 A NC+++GLC+ A+K+F ME KD FTYS CKA+++ A+RL+ L Sbjct: 359 AQNCVIDGLCKVGQLDHAIKMFASMEVKDSFTYSSMVHNLCKARRYRHASRLLLACLRGG 418 Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTRY 75 +K+L++ Q++ + GL +GY EA +L+S I +A+ Y Sbjct: 419 MKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 457 >ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915-like [Glycine max] Length = 461 Score = 131 bits (330), Expect = 5e-29 Identities = 66/156 (42%), Positives = 105/156 (67%), Gaps = 12/156 (7%) Frame = -1 Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336 R+G+L++A L +E++ G+E DQYTHTI+VDG+C++G+ DGA+RHL M GF SN V Sbjct: 304 RQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLV 363 Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192 A NC L+GL + A+++F ME KD FTY+ C+A++F A++++ + L Sbjct: 364 AFNCFLDGLGKAGHIDHALRLFEVMEVKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCG 423 Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKY 84 +VL++ Q+A + GLRS GY EA +++ I +A++ Sbjct: 424 YQVLRATQRAVIVGLRSIGYANEARKVKLTIRLAQF 459 >ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 487 Score = 127 bits (320), Expect = 7e-28 Identities = 64/155 (41%), Positives = 106/155 (68%), Gaps = 12/155 (7%) Frame = -1 Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336 ++G LE A+ L +E++K G++ D+YTHTIL++ MC++G++ GA RH++ M M GF S V Sbjct: 329 KQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMGFDSCLV 388 Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192 A NC+++GLC+ A+K+F M+ +D FTYS CK +F A++L+ + L Sbjct: 389 ALNCMVDGLCKNGQIDHAVKLFESMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSG 448 Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAK 87 +K+L SAQ+ + GLR +G+++EA +L+S I +A+ Sbjct: 449 MKILPSAQRVVISGLRYSGFQKEARKLKSKIKLAR 483 >ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays] gi|238006488|gb|ACR34279.1| unknown [Zea mays] gi|413925463|gb|AFW65395.1| hypothetical protein ZEAMMB73_565010 [Zea mays] Length = 462 Score = 123 bits (309), Expect = 1e-26 Identities = 62/158 (39%), Positives = 104/158 (65%), Gaps = 12/158 (7%) Frame = -1 Query: 515 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGAERHLKLMEMKGFKSNFV 336 +EGK+ +AF L N +++ G+ESD+YT +ILV+G+C+ G ++ AE+ + MEM G +SN V Sbjct: 304 QEGKINDAFELLNMMEEGGLESDEYTFSILVNGLCKMGQIEAAEKQIWSMEMMGMQSNVV 363 Query: 335 ASNCLLNGLCQ------AMKVFGRMEYKDDFTYS------CKAKQFFAAARLIKTSLIED 192 A NCL++ LC+ A+K+ M+ KDDF+Y+ CK ++ A++ ++ L E Sbjct: 364 AYNCLIDALCKCHEVDAAIKILHSMKLKDDFSYTSLVHGLCKVGRYHMASKFLRICLHEG 423 Query: 191 VKVLKSAQKATVFGLRSTGYKREASQLQSAITVAKYTR 78 VL SA++A + GLRS G+K + +++SA+ +A+ R Sbjct: 424 NNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARLLR 461