BLASTX nr result

ID: Coptis25_contig00022363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022363
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280572.2| PREDICTED: uncharacterized protein LOC100246...   115   3e-23
emb|CBI15106.3| unnamed protein product [Vitis vinifera]               98   4e-18
ref|XP_002323812.1| predicted protein [Populus trichocarpa] gi|2...    95   4e-17
ref|XP_002298519.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-16
ref|XP_002511476.1| conserved hypothetical protein [Ricinus comm...    80   9e-13

>ref|XP_002280572.2| PREDICTED: uncharacterized protein LOC100246721 [Vitis vinifera]
          Length = 531

 Score =  115 bits (287), Expect = 3e-23
 Identities = 98/375 (26%), Positives = 169/375 (45%), Gaps = 17/375 (4%)
 Frame = -3

Query: 1112 KLHEAGDVANYLRTELREVKEELQKLKSNLVQPLDKKIVKGAAASDEDAPQVNKVITSES 933
            +L EA D+   LR ELREV+  L+K+    +Q LD+K  KG A ++ +APQ  K+  S S
Sbjct: 85   QLEEAEDIVRELREELREVQNALEKMTKKQLQALDEKSFKGNAGTEVEAPQEYKLSASAS 144

Query: 932  ILLYPLALGPATLSSSNVKDARLYQSHAFDHCSSAPDNVLLWTELPSDCPEENFDAGKPD 753
            ++L      P  +++S++K++   + +  + C  A D+ +           EN      D
Sbjct: 145  LILPRTGSRPEPVTTSDLKNSTFNKRNEGNKCYGANDSYM-----------ENCFVANRD 193

Query: 752  LSLMIERTKEPQLYRSGCTQRVHAFDKNQLNGKSSSPVHTDNQSLHKKRNSFFQENEASE 573
             + ++ R+KEP+LYR+GCTQR+ AF+ + L GK S     D         +  +E E  E
Sbjct: 194  FASIVTRSKEPELYRNGCTQRIRAFESSLLEGKLSLSGQVDGA---MNETTIGEEEEGGE 250

Query: 572  GACISVSTKAGNMHLTKKNTTRLGKLLQIDNCWDKAQGFKFVRIPXXXXXXXXXXXXXTF 393
            G  ++   K  N+   ++N     ++ Q D      Q  K  R               + 
Sbjct: 251  GIYMTSIPKDDNVCRMERNPDEAKEIRQEDGNLYPVQAIKSFRRKRKRAVRYSNKAPSST 310

Query: 392  C-TNQMMKSPVGASLTTCQISTRLESNIGKLGKDPSRRIEQTEHKVPSVMGSKLGCPADI 216
            C  +Q+ ++   + L+  +      +N  + G+ PS R      K P    + L  P+D 
Sbjct: 311  CLLDQVTETHQASDLSFSKTYHYAITNDLQSGETPSNRTANESQKDPE-SPAALKLPSDA 369

Query: 215  L-------------IDTEVLEARSIQNSCNEGKV--DKSYLTTHEKGA-DRSEVPDSISS 84
                           D E ++A S +++ N+ KV  D + L+  E G+ + SE  +    
Sbjct: 370  TETSKQSECIEVAENDAEFVKACSARSTLNKNKVLIDDTVLSRQESGSLEISEAHNCTMD 429

Query: 83   LRNVQVQLMNSNSQV 39
            L    V ++NS+ +V
Sbjct: 430  LETANVSVVNSDLKV 444


>emb|CBI15106.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 59/190 (31%), Positives = 98/190 (51%)
 Frame = -3

Query: 1112 KLHEAGDVANYLRTELREVKEELQKLKSNLVQPLDKKIVKGAAASDEDAPQVNKVITSES 933
            +L EA D+   LR ELREV+  L+K+    +Q LD+K  KG A ++ +APQ  K+  S S
Sbjct: 85   QLEEAEDIVRELREELREVQNALEKMTKKQLQALDEKSFKGNAGTEVEAPQEYKLSASAS 144

Query: 932  ILLYPLALGPATLSSSNVKDARLYQSHAFDHCSSAPDNVLLWTELPSDCPEENFDAGKPD 753
            ++L      P  +++S++K++   + +  + C  A D+ +           EN      D
Sbjct: 145  LILPRTGSRPEPVTTSDLKNSTFNKRNEGNKCYGANDSYM-----------ENCFVANRD 193

Query: 752  LSLMIERTKEPQLYRSGCTQRVHAFDKNQLNGKSSSPVHTDNQSLHKKRNSFFQENEASE 573
             + ++ R+KEP+LYR+GCTQR+ AF+ + L GK S     D         +  +E E   
Sbjct: 194  FASIVTRSKEPELYRNGCTQRIRAFESSLLEGKLSLSGQVDGA---MNETTIGEEEEGES 250

Query: 572  GACISVSTKA 543
             A + + + A
Sbjct: 251  PAALKLPSDA 260


>ref|XP_002323812.1| predicted protein [Populus trichocarpa] gi|222866814|gb|EEF03945.1|
            predicted protein [Populus trichocarpa]
          Length = 595

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 70/194 (36%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
 Frame = -3

Query: 1112 KLHEAGDVANYLRTELREVKEELQKLKSNLVQPLDKKIVKGAAASDEDAPQVNKVITSES 933
            +L EA  V   LR ELR V++EL+K++++ VQP + + VK   +S +        +TSE 
Sbjct: 85   QLQEAEGVIIDLRAELRWVRDELEKVRNSQVQPSNGEAVKENESSHQH-------LTSEP 137

Query: 932  ILLYPLALGPATLSSSNVKDARLYQSHAFDHCSSAPDNVLLWTELPSDCPEENFDAGKPD 753
            I+L    L P T+++SNVK   L Q + F+ C +  D  L      S  P EN+ A   D
Sbjct: 138  IVLSLSNLPPQTVATSNVKGTLLDQRN-FNKCCNTEDQQL------SVSPLENYSARNAD 190

Query: 752  LSLMIERTKEPQLYRSGCTQRVHAFDKNQLNGK-SSSPVHTDNQSLHKKRNSFFQENEAS 576
            L+ +    KEP+LYR+GCTQR+ A + N    K   S V  + QSL  K     + +   
Sbjct: 191  LASITMANKEPELYRNGCTQRIRASEGNAFASKLPPSDVGVEQQSL-IKNEVIVKASNGD 249

Query: 575  EGACISVSTKAGNM 534
            EG C   S K  N+
Sbjct: 250  EGKCTETSPKTKNV 263


>ref|XP_002298519.1| predicted protein [Populus trichocarpa] gi|222845777|gb|EEE83324.1|
            predicted protein [Populus trichocarpa]
          Length = 616

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 62/196 (31%), Positives = 103/196 (52%)
 Frame = -3

Query: 1112 KLHEAGDVANYLRTELREVKEELQKLKSNLVQPLDKKIVKGAAASDEDAPQVNKVITSES 933
            +L EA  V   LR ELR +++EL+K++++  QP + K+VK   +S+++       +TSE 
Sbjct: 85   QLQEAEGVIIDLRDELRWLRDELEKVRNSQGQPSNGKLVKENESSNQN-------LTSEP 137

Query: 932  ILLYPLALGPATLSSSNVKDARLYQSHAFDHCSSAPDNVLLWTELPSDCPEENFDAGKPD 753
            I+L    L P T+++S+VK A+L Q +  D C +  +++   T L      EN+ +   D
Sbjct: 138  IILSMTDLSPQTVATSDVKSAQLDQRNFNDKCRNTTEDIEQLTVLNF----ENYSSHDAD 193

Query: 752  LSLMIERTKEPQLYRSGCTQRVHAFDKNQLNGKSSSPVHTDNQSLHKKRNSFFQENEASE 573
            L+ ++   KEP+LYR+GCTQR+ A + N    + + P     Q    K     + +   E
Sbjct: 194  LAAIMMTNKEPELYRNGCTQRIRALEGNLFASRLTPPGVVAEQESLIKNEVISKASNMDE 253

Query: 572  GACISVSTKAGNMHLT 525
            G C   S K   +  T
Sbjct: 254  GKCSVPSPKTKALEKT 269


>ref|XP_002511476.1| conserved hypothetical protein [Ricinus communis]
            gi|223550591|gb|EEF52078.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 559

 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 52/159 (32%), Positives = 92/159 (57%), Gaps = 4/159 (2%)
 Frame = -3

Query: 1112 KLHEAGDVANYLRTELREVKEELQKLKSNLVQPLDKKIVKGAAASDEDAPQVNKVITSES 933
            +L EA D+   LR+ELRE+++EL+K+ ++ ++PL+++  +G   +   A + N++ TS S
Sbjct: 85   QLGEAEDIVKDLRSELRELQDELEKVANSQMRPLEEQNPEGERTTLVTAFEENRLSTSGS 144

Query: 932  ILLYPLALGPATLSSSNV----KDARLYQSHAFDHCSSAPDNVLLWTELPSDCPEENFDA 765
            ++      GPA+ S   +    K+  L  + A            L++E   DC ++N   
Sbjct: 145  VI----PSGPASQSDPVITLETKNLTLNGTCA---------GTRLYSE--GDCRKDNCFV 189

Query: 764  GKPDLSLMIERTKEPQLYRSGCTQRVHAFDKNQLNGKSS 648
              PD + ++ R+KEP+LYR+GCTQR+ AF+++ L G  S
Sbjct: 190  CNPDFASIVMRSKEPELYRNGCTQRIRAFERSLLGGNLS 228


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