BLASTX nr result

ID: Coptis25_contig00022356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022356
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinife...    75   2e-11

>emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinifera]
           gi|297743765|emb|CBI36648.3| unnamed protein product
           [Vitis vinifera]
          Length = 434

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 76/219 (34%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
 Frame = -1

Query: 714 KLTKKSAAIFPESE----EYGVDDQFDFEKWSGEGDCMWLFSDI-KPHSLTCEDHL-GTE 553
           ++  ++AA+FPESE    +  +  + D E  +GE + +WL SD   P S   E  L    
Sbjct: 38  RMGPEAAAVFPESEVIEDDCDLGKRLDEESCNGENESLWLSSDCYSPASFFSEYRLYDWP 97

Query: 552 RLSFR------LSISRNSVLSPINEISFFDGSRTDPIDEASLLLEKM--SNLTIVRKNL- 400
            LSF       L +SR    S    I FFDGSR +PI+EA L+LEK       I++++L 
Sbjct: 98  PLSFDEWMISWLQVSRQLWFSSGKGIGFFDGSRINPIEEACLVLEKSLPDAEKILQEDLE 157

Query: 399 -EQVVPWQLSSSWNGMKEMSE---SSDEQSCYENSSDCESSWMSLST---------DDAS 259
            E+VV W LSS+ N + + S    S    S +E S+  ES    L T         D   
Sbjct: 158 EEEVVTWLLSSTENDVADSSSVIYSESSVSSFEESAGSESPSTPLITHLKPSFRGLDSDR 217

Query: 258 SGIW----ELDKMDACDPLIDIRTGWDVFQ-SEFPSPSY 157
           +G W    +LD+ D    + D  +  D  Q S+FPSPSY
Sbjct: 218 TGFWVSLVDLDEED-FKWISDSGSVLDSLQSSDFPSPSY 255


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