BLASTX nr result

ID: Coptis25_contig00022344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022344
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|2...   228   1e-57
gb|AFK40756.1| unknown [Medicago truncatula]                          218   1e-54
ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-tra...   218   1e-54
ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   211   1e-52
ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp....   207   3e-51

>ref|XP_002297914.1| predicted protein [Populus trichocarpa] gi|222845172|gb|EEE82719.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  228 bits (581), Expect = 1e-57
 Identities = 124/201 (61%), Positives = 139/201 (69%), Gaps = 5/201 (2%)
 Frame = -1

Query: 766 HTPKKISIPTKDL----VHITNAASTR-SVSSQHNLELQQPLHLSKRETIGLSFCLALTS 602
           +TP+ +S P   L    +  T  +S + S  SQ N   Q  L   +RE IGL FC     
Sbjct: 11  YTPRNLSAPNTTLPAKNLDTTKVSSIKFSSHSQENFSRQLQL-FKRREAIGLGFCAGFLD 69

Query: 601 VFTQQPQIALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFD 422
           V  QQ   A AEEA  C+ TVAPSGL FCD++VG GLEA  GQLIKAHYVGKLE+GKIFD
Sbjct: 70  VLLQQQLTATAEEA-PCELTVAPSGLAFCDKIVGTGLEAVKGQLIKAHYVGKLESGKIFD 128

Query: 421 SSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKA 242
           SSYNRGKPLTFR+GVGEV             IPPMLAGGKR LKLPPEL YG+RGAGCK 
Sbjct: 129 SSYNRGKPLTFRVGVGEVIKGWDQGILGGDGIPPMLAGGKRKLKLPPELAYGMRGAGCKG 188

Query: 241 GSCVIPPNSVLLFDVEFIGKA 179
           GSC+IPP+SVLLFDVEFIGKA
Sbjct: 189 GSCIIPPDSVLLFDVEFIGKA 209


>gb|AFK40756.1| unknown [Medicago truncatula]
          Length = 207

 Score =  218 bits (556), Expect = 1e-54
 Identities = 117/194 (60%), Positives = 136/194 (70%), Gaps = 4/194 (2%)
 Frame = -1

Query: 748 SIPTKDLVHITNAASTRSVSSQHN--LELQQPLHLSKRETIGLSFCLALTSVFTQQPQI- 578
           S+  + L H+ +  +T SV  Q    + +Q+   L +RE IGLS    L     Q P I 
Sbjct: 15  SLQPQKLNHLNSLTTTCSVQVQQQPPVLVQKDNQLKRREAIGLSLSFGLLHSLLQ-PIIP 73

Query: 577 -ALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGK 401
            A A EA+ CQ TVAPSGL +CD+VVGYG +A  GQLIKAHYVG+LENGK+FDSSYNRGK
Sbjct: 74  TATAAEAVPCQLTVAPSGLSYCDKVVGYGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGK 133

Query: 400 PLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPP 221
           PLTFR+GVGEV             IPPML GGKRTLKLPPE GYG RGAGCK GSCVIPP
Sbjct: 134 PLTFRVGVGEVIKGWDVGILGDDGIPPMLTGGKRTLKLPPEFGYGSRGAGCKGGSCVIPP 193

Query: 220 NSVLLFDVEFIGKA 179
           ++VLLFDVEF+GKA
Sbjct: 194 DAVLLFDVEFVGKA 207


>ref|XP_002272628.1| PREDICTED: FKBP-type peptidyl-prolyl cis-trans isomerase 3,
           chloroplastic [Vitis vinifera]
           gi|297738045|emb|CBI27246.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  218 bits (555), Expect = 1e-54
 Identities = 113/186 (60%), Positives = 131/186 (70%)
 Frame = -1

Query: 736 KDLVHITNAASTRSVSSQHNLELQQPLHLSKRETIGLSFCLALTSVFTQQPQIALAEEAL 557
           K L H   ++S R +    N  L       +RE IG  FC ++  VF Q  Q ++A +  
Sbjct: 37  KILSHHQESSSPRPLQINENSPL-----FGRREAIGFGFCFSILDVFLQA-QPSVAAQTA 90

Query: 556 KCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRIGV 377
            C+ TVAPSGL FCD+VVG G EA  GQLIKAHYVGKLE+GK+FDSSY+RGKPLTFRIGV
Sbjct: 91  PCELTVAPSGLAFCDKVVGTGPEAVEGQLIKAHYVGKLESGKVFDSSYDRGKPLTFRIGV 150

Query: 376 GEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPPNSVLLFDV 197
           GEV             +PPMLAGGKRTLKLPPELGYG RGAGC+ GSC+IPP+SVLLFDV
Sbjct: 151 GEVIRGWDQGILGGDGVPPMLAGGKRTLKLPPELGYGTRGAGCRGGSCIIPPDSVLLFDV 210

Query: 196 EFIGKA 179
           EFIGKA
Sbjct: 211 EFIGKA 216


>ref|XP_004134516.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13,
           chloroplastic-like isoform 1 [Cucumis sativus]
          Length = 214

 Score =  211 bits (538), Expect = 1e-52
 Identities = 117/210 (55%), Positives = 135/210 (64%), Gaps = 7/210 (3%)
 Frame = -1

Query: 787 AISLVVPHT--PKKISIP----TKDLVHITNAASTRSVSSQHNLELQQ-PLHLSKRETIG 629
           ++  V P T   K IS+     TK +   T A + +       LE ++ P    +RE IG
Sbjct: 7   SVGAVTPRTLSSKDISLDKCLTTKQVSKFTYARTPKINFPHQKLEAKENPASFGRREAIG 66

Query: 628 LSFCLALTSVFTQQPQIALAEEALKCQFTVAPSGLEFCDQVVGYGLEATTGQLIKAHYVG 449
             F L L  V  Q   +  A EA  C+ T APSGL FCD+VVG G EA  GQLIKAHYVG
Sbjct: 67  CGFLLGLGKVLLQP--LPAAAEATPCELTTAPSGLAFCDKVVGSGPEAEKGQLIKAHYVG 124

Query: 448 KLENGKIFDSSYNRGKPLTFRIGVGEVXXXXXXXXXXXXXIPPMLAGGKRTLKLPPELGY 269
           KLE+GK+FDSSYNRGKPLTFR+GVGEV             +P ML GGKR LKLPPELGY
Sbjct: 125 KLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPELGY 184

Query: 268 GVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 179
           G RGAGC+ GSC+IPPNSVLLFDVEFIGKA
Sbjct: 185 GARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214


>ref|XP_002865230.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311065|gb|EFH41489.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  207 bits (526), Expect = 3e-51
 Identities = 108/180 (60%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = -1

Query: 715 NAASTRSVSSQHNLELQQPLHLSKRETI-GLSFCLALTSVFTQQPQIALAEEALKCQFTV 539
           N  +T+  SS   L   Q     +RE I G  F + L         ++   E   C+F+V
Sbjct: 35  NLRNTQKASSDPELSFVQLSSCGRREAIIGFGFSIGLLD------NVSALAETTSCEFSV 88

Query: 538 APSGLEFCDQVVGYGLEATTGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRIGVGEVXXX 359
           +PSGL FCD+VVGYG EA  GQLIKAHYVGKLENGK+FDSSYNRGKPLTFRIGVGEV   
Sbjct: 89  SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIRG 148

Query: 358 XXXXXXXXXXIPPMLAGGKRTLKLPPELGYGVRGAGCKAGSCVIPPNSVLLFDVEFIGKA 179
                     IPPML GGKRTLK+PPEL YG RGAGCK GSC+IPP SVLLFD+EFIGKA
Sbjct: 149 WDQGILGSDGIPPMLTGGKRTLKIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEFIGKA 208


Top