BLASTX nr result

ID: Coptis25_contig00022342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022342
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273675.1| PREDICTED: DNA replication licensing factor ...   308   6e-82
ref|XP_002489145.1| hypothetical protein SORBIDRAFT_0019s004400 ...   299   3e-79
ref|XP_002512698.1| DNA replication licensing factor MCM2, putat...   298   8e-79
ref|NP_001067910.1| Os11g0484300 [Oryza sativa Japonica Group] g...   297   1e-78
gb|EEC68174.1| hypothetical protein OsI_36121 [Oryza sativa Indi...   297   1e-78

>ref|XP_002273675.1| PREDICTED: DNA replication licensing factor mcm2 [Vitis vinifera]
           gi|296085553|emb|CBI29285.3| unnamed protein product
           [Vitis vinifera]
          Length = 954

 Score =  308 bits (789), Expect = 6e-82
 Identities = 159/207 (76%), Positives = 172/207 (83%)
 Frame = +1

Query: 43  LFNDNYMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMADRQAAELELDAKEGRSKSNRK 222
           L+NDN+MDDYRRM+EHDQYESLGL++SLEDERDLDQIM DR+AAE+ELD ++ R  +  K
Sbjct: 80  LYNDNFMDDYRRMDEHDQYESLGLDESLEDERDLDQIMEDRRAAEMELDTRDTRI-TETK 138

Query: 223 LPRLLHDQDTDEDIPYRRPKRSRADFRPPRDARSYDDTDAMQSSPGRSQHGHSREDVPMT 402
           LPRLL DQDTD+D  +R  KRSRADFRPP  ARSYDD DAM SSPGRS+ GHSREDVPMT
Sbjct: 139 LPRLLLDQDTDDD-NHRPSKRSRADFRPPAAARSYDDADAMLSSPGRSR-GHSREDVPMT 196

Query: 403 DQTXXXXXXXXXXXXXXXXMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEHGD 582
           DQT                MYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEHGD
Sbjct: 197 DQTDDEPYEDDDDDDGEFEMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEHGD 256

Query: 583 FEYVRLINEMSLANKCSLEIDYKQFIY 663
           FEYVRLINEM  ANKCSLEIDYKQFIY
Sbjct: 257 FEYVRLINEMVSANKCSLEIDYKQFIY 283


>ref|XP_002489145.1| hypothetical protein SORBIDRAFT_0019s004400 [Sorghum bicolor]
           gi|241947244|gb|EES20389.1| hypothetical protein
           SORBIDRAFT_0019s004400 [Sorghum bicolor]
          Length = 955

 Score =  299 bits (766), Expect = 3e-79
 Identities = 157/214 (73%), Positives = 174/214 (81%), Gaps = 7/214 (3%)
 Frame = +1

Query: 43  LFNDNYMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMADRQAAELELDAKEGRS--KSN 216
           LFNDNY+DDYRRM+EHDQYES+GL+DSLEDER+LD+IMADR+AAE+ELDA++ RS   ++
Sbjct: 71  LFNDNYLDDYRRMDEHDQYESVGLDDSLEDERNLDEIMADRRAAEVELDARDVRSGTAAD 130

Query: 217 RKLPRLLHDQDTDEDIPYRRPKRSRADFRPP---RDARSYDDTD-AMQSSPGRSQHG-HS 381
           RKLPR+LHDQDTDED+ +RRPKR RA FRPP   R  RS DD D A  SSPGRSQ G +S
Sbjct: 131 RKLPRMLHDQDTDEDMNFRRPKRHRASFRPPSGPRTPRSDDDGDGATPSSPGRSQRGMYS 190

Query: 382 REDVPMTDQTXXXXXXXXXXXXXXXXMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 561
             DVPMTDQT                MYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN
Sbjct: 191 GGDVPMTDQTDDDPYEDEFDEEDEMNMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 250

Query: 562 PKNEHGDFEYVRLINEMSLANKCSLEIDYKQFIY 663
           PKN+ GD EYVRLINEM LANKCSLEIDYKQFIY
Sbjct: 251 PKNDQGDIEYVRLINEMVLANKCSLEIDYKQFIY 284


>ref|XP_002512698.1| DNA replication licensing factor MCM2, putative [Ricinus communis]
           gi|223548659|gb|EEF50150.1| DNA replication licensing
           factor MCM2, putative [Ricinus communis]
          Length = 930

 Score =  298 bits (762), Expect = 8e-79
 Identities = 154/207 (74%), Positives = 170/207 (82%)
 Frame = +1

Query: 43  LFNDNYMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMADRQAAELELDAKEGRSKSNRK 222
           LFNDN+MDDYRRMEEHDQYES+GL+DS+EDERDLDQIM DR+AAE+ELDA++ R  +NRK
Sbjct: 59  LFNDNFMDDYRRMEEHDQYESVGLDDSVEDERDLDQIMNDRRAAEVELDARDSR-LTNRK 117

Query: 223 LPRLLHDQDTDEDIPYRRPKRSRADFRPPRDARSYDDTDAMQSSPGRSQHGHSREDVPMT 402
           LPRLLHD DTD+D  YR PKRSRADFRPP   +S+DDTDAMQSSPGRSQ  HSR+DVPMT
Sbjct: 118 LPRLLHDHDTDDD-SYRPPKRSRADFRPPSSQQSHDDTDAMQSSPGRSQRHHSRDDVPMT 176

Query: 403 DQTXXXXXXXXXXXXXXXXMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEHGD 582
           D                  +YRVQGTLREWVTRDEVRRFIAKKFKEFLLTYV  K +H D
Sbjct: 177 DD--YPFEDEDGDEGDEFEVYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYV--KKDHDD 232

Query: 583 FEYVRLINEMSLANKCSLEIDYKQFIY 663
           FEYVRLINEM  ANKCSLEIDYKQFI+
Sbjct: 233 FEYVRLINEMVSANKCSLEIDYKQFIF 259


>ref|NP_001067910.1| Os11g0484300 [Oryza sativa Japonica Group]
           gi|77550895|gb|ABA93692.1| DNA replication licensing
           factor MCM2, putative, expressed [Oryza sativa Japonica
           Group] gi|113645132|dbj|BAF28273.1| Os11g0484300 [Oryza
           sativa Japonica Group] gi|215768251|dbj|BAH00480.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222615975|gb|EEE52107.1| hypothetical protein
           OsJ_33907 [Oryza sativa Japonica Group]
          Length = 961

 Score =  297 bits (760), Expect = 1e-78
 Identities = 155/214 (72%), Positives = 175/214 (81%), Gaps = 7/214 (3%)
 Frame = +1

Query: 43  LFNDNYMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMADRQAAELELDAKEGRSKS--N 216
           LFNDNY+DDYRRM+E DQYES+GL+DS+EDER+LD+IMADR+AAE ELDA++ R+ +  +
Sbjct: 77  LFNDNYLDDYRRMDEQDQYESVGLDDSIEDERNLDEIMADRRAAEAELDARDVRTGAAPD 136

Query: 217 RKLPRLLHDQDTDEDIPYRRPKRSRADFRPPRDAR---SYDDTD-AMQSSPGRSQHG-HS 381
           RKLPR+LHDQDTDED+ +RRPKR RA+FRPPR+ R   S DD D A  SSPGRSQ G +S
Sbjct: 137 RKLPRMLHDQDTDEDMSFRRPKRHRANFRPPREPRTPRSDDDGDGATPSSPGRSQRGMYS 196

Query: 382 REDVPMTDQTXXXXXXXXXXXXXXXXMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 561
             DVPMTDQT                MYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN
Sbjct: 197 GGDVPMTDQTDDDPYEDEFDEEDEMNMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 256

Query: 562 PKNEHGDFEYVRLINEMSLANKCSLEIDYKQFIY 663
           PKNE G+FEYVRLINEM LANKCSLEIDYKQFIY
Sbjct: 257 PKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIY 290


>gb|EEC68174.1| hypothetical protein OsI_36121 [Oryza sativa Indica Group]
          Length = 961

 Score =  297 bits (760), Expect = 1e-78
 Identities = 155/214 (72%), Positives = 175/214 (81%), Gaps = 7/214 (3%)
 Frame = +1

Query: 43  LFNDNYMDDYRRMEEHDQYESLGLNDSLEDERDLDQIMADRQAAELELDAKEGRSKS--N 216
           LFNDNY+DDYRRM+E DQYES+GL+DS+EDER+LD+IMADR+AAE ELDA++ R+ +  +
Sbjct: 77  LFNDNYLDDYRRMDEQDQYESVGLDDSIEDERNLDEIMADRRAAEAELDARDVRTGAAPD 136

Query: 217 RKLPRLLHDQDTDEDIPYRRPKRSRADFRPPRDAR---SYDDTD-AMQSSPGRSQHG-HS 381
           RKLPR+LHDQDTDED+ +RRPKR RA+FRPPR+ R   S DD D A  SSPGRSQ G +S
Sbjct: 137 RKLPRMLHDQDTDEDMSFRRPKRHRANFRPPREPRTPRSDDDGDGATPSSPGRSQRGMYS 196

Query: 382 REDVPMTDQTXXXXXXXXXXXXXXXXMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 561
             DVPMTDQT                MYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN
Sbjct: 197 GGDVPMTDQTDDDPYEDEFDEEDEMNMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVN 256

Query: 562 PKNEHGDFEYVRLINEMSLANKCSLEIDYKQFIY 663
           PKNE G+FEYVRLINEM LANKCSLEIDYKQFIY
Sbjct: 257 PKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIY 290


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