BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022341
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]   207   4e-51
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   194   4e-47
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   161   2e-37
emb|CBI28245.3| unnamed protein product [Vitis vinifera]              153   8e-35

>emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]
          Length = 1138

 Score =  207 bits (527), Expect = 4e-51
 Identities = 144/367 (39%), Positives = 208/367 (56%), Gaps = 14/367 (3%)
 Frame = +1

Query: 4    LTILQFSMVAQSVQNASRMDIILQVMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLK 183
            LT+L   +   +  +A +M+ IL  ++KH K ++S  +PLE+L A I +LYKH  ++ L 
Sbjct: 645  LTMLYVYIAVHATFDAPKMEFILLGVQKHFKFLMSLYDPLENLCATIVLLYKHMRVSCLN 704

Query: 184  IWVIIANDLKEHIDGVKDTPFLKTEMDGDGCLAVCWFLSYPFMV--CLHPQNLLSSDLSL 357
            IWV IA  L+++I  VKD   LKTE+D  GCLAVC  LSYPF++  CL  Q+ L+     
Sbjct: 705  IWVAIAQGLEDYIKDVKDLSPLKTELDSYGCLAVCHLLSYPFVLXSCLPKQSSLTKISGS 764

Query: 358  LCPQVNLKNIVEVWKSLYGSVKCYAQREWSTMTTFHENLCGILNKVLNKNP---DGDTDL 528
               ++ L+++ EVWKSLYG V   ++ E S    F E+LC +L++ L++N    D DT+L
Sbjct: 765  SQRKLELEHVTEVWKSLYGFVNSASRFECSNTNIFSEDLCSMLSRCLDENSSKLDYDTEL 824

Query: 529  -LKDKNQNLVLQHLCGEVAICLLTQLSDFDNEALSAKVSDADFFLSNS-IRNSLEFIARY 702
               DK Q L L  LCG++ I +L         +   K  D D  +S+S I +SL  IAR 
Sbjct: 825  DPSDKKQYLDLLSLCGDIVIYILEHTLTLRVNSEGTKNKDDDCSMSSSGINSSLGLIARL 884

Query: 703  LRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHPRMKHH-----ILSL--MEICSDPLVQW 861
            +   L V V D +      +R+      +I    M ++      LS   ++I S  L+QW
Sbjct: 885  IIYGLIVKV-DGKGPRFKLLRI--PFKEWIYEDAMYNYGNRCTNLSCYDLKIMSSSLLQW 941

Query: 862  LSIYAPMHVEMQEGSIVCQLELLWSEMINSLERSQPSITFDTSFLKVLAPVLKATLDQAN 1041
            LS     HVE  + S + +L LLW+E +N L RSQP I FD+SFL + AP+L+ TLD  N
Sbjct: 942  LS-----HVEKWDESTIHKLGLLWTETLNCLRRSQPPIIFDSSFLXLQAPLLEKTLDHPN 996

Query: 1042 SAISKST 1062
             +IS ST
Sbjct: 997  PSISDST 1003


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
            gi|223528402|gb|EEF30438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1038

 Score =  198 bits (503), Expect = 2e-48
 Identities = 137/367 (37%), Positives = 206/367 (56%), Gaps = 14/367 (3%)
 Frame = +1

Query: 4    LTILQFSMVAQSVQNASRMDIILQVMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLK 183
            L IL   M  QS  +  R ++I   + K  KLIL S +  E+L+  I +LYK      L+
Sbjct: 526  LIILSICMGTQSTSHRPRAELISTTLYKIFKLILFSYDSKENLHVAIGLLYKFVGYRNLQ 585

Query: 184  IWVIIANDLKEHIDGVKDTPFLKTEMDGDGCLAVCWFLSYPFMVCLHPQNLL-------S 342
            IW++IA  L++ I G++D   L+ E DG+G L +   LSYPF+    P  +L       S
Sbjct: 586  IWIVIAEALRDCIGGIQDLSMLRMEPDGNGHLCLYHLLSYPFVAWSSPPKILTPEEVSFS 645

Query: 343  SDLSLLCPQVN--LKNIVEVWKSLYGSVKCYAQREWSTMTTFHENLCGILNKVLNKN--- 507
            S+ S +  Q N  L++++EVWKS+YG++        S   +F +NLC +LN  +++N   
Sbjct: 646  SEESHIPVQGNLELEHVIEVWKSVYGALSLSI---CSATKSFSDNLCSMLNWCIDENLSM 702

Query: 508  PDGDTDL-LKDKNQNLVLQHLCGEVAICLLTQ-LSDFDNEALSAKVSDADFFLSNSIRNS 681
             D  T++ L  KN +L    L G    C+L + L+   ++  + +V    F   + I+N 
Sbjct: 703  TDRGTEVDLSYKNPDLDFLFLSGNAVSCVLEEILTAGCDDNKNNRVEPPIF---SDIKNV 759

Query: 682  LEFIARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHPRMKHHILSLMEICSDPLVQW 861
            L F++R+L+LS      D    L VT RV SA+  F++   +KH ILS +EI + PL+QW
Sbjct: 760  LAFVSRFLKLSSTRIQADPTIGLPVTSRVFSALARFMSCLHLKHTILSTIEILTCPLIQW 819

Query: 862  LSIYAPMHVEMQEGSIVCQLELLWSEMINSLERSQPSITFDTSFLKVLAPVLKATLDQAN 1041
            LS     H EM++GS   QL  LW+E+++ L RSQP I FD+SFLK  A +L+ TLD  +
Sbjct: 820  LS-----HREMRDGSTNDQLRDLWAEILDCLRRSQPPIVFDSSFLKCQASILEKTLDHPD 874

Query: 1042 SAISKST 1062
            S IS+ T
Sbjct: 875  STISELT 881


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  194 bits (492), Expect = 4e-47
 Identities = 136/371 (36%), Positives = 199/371 (53%), Gaps = 18/371 (4%)
 Frame = +1

Query: 4    LTILQFSMVAQSVQNASRMDIILQVMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLK 183
            L++L   +V  S      M+++LQ +++  K IL   +P+E+L+  + +LYKH +   L 
Sbjct: 599  LSVLYICVVIPSTPATRGMELLLQGLRRFFKTILLLYDPVENLSVAVGLLYKHMEFRHLD 658

Query: 184  IWVIIANDLKEHIDG--VKDTPFLKTEMDGDGCLAVCWFLSYPFMVC-----LHPQNLLS 342
            IW  IA  L++  +G  VKD   LK + + D   AVC  LSYPF+VC        ++  S
Sbjct: 659  IWTAIAKGLEDFFNGLTVKDLSLLKMDSNRDFPRAVCHLLSYPFVVCSCSWPTQKKDSGS 718

Query: 343  SDLSLLCPQVNLK--NIVEVWKSLYGSVKCYAQREWSTMTTFHENLCGILNKVLNKNP-- 510
               SL+ P+  LK   + EVWKSLYG++      ++S  ++  E LC +LN  +++N   
Sbjct: 719  LKESLVSPERKLKLQQVAEVWKSLYGALCASKFNKFSETSSLTEELCSMLNGCIDQNISM 778

Query: 511  -DGDTDLLKDKNQNLVLQHLCGEVAICLLTQ------LSDFDNEALSAKVSDADFFLSNS 669
             D  T+    ++ ++ L +L G    C++ Q       S   N    A+  D   F  + 
Sbjct: 779  LDHGTEQYFHRD-DIGLTYLSGTAVTCVMEQQILTLAASSVGNNVEHAR--DPKTF--SG 833

Query: 670  IRNSLEFIARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHPRMKHHILSLMEICSDP 849
            I+NSLEF +R+L+LS  +   D  T L VT RV S +  F+     K  ILS +E  S P
Sbjct: 834  IKNSLEFSSRFLKLSWSMMEADPSTILFVTSRVFSVLVCFVRCLHTKPSILSFIETISCP 893

Query: 850  LVQWLSIYAPMHVEMQEGSIVCQLELLWSEMINSLERSQPSITFDTSFLKVLAPVLKATL 1029
            L+QWLS     H E QE S   QL  LWSE++N L R QP I FD+S LK+ AP+L+ TL
Sbjct: 894  LLQWLS-----HRETQEASTNEQLHHLWSEILNCLRRCQPPIVFDSSLLKLQAPLLEKTL 948

Query: 1030 DQANSAISKST 1062
            D   S IS+ T
Sbjct: 949  DHPKSTISELT 959


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
            gi|355510459|gb|AES91601.1| Telomere-associated protein
            RIF1 [Medicago truncatula]
          Length = 1121

 Score =  161 bits (408), Expect = 2e-37
 Identities = 117/366 (31%), Positives = 182/366 (49%), Gaps = 13/366 (3%)
 Frame = +1

Query: 4    LTILQFSMVAQSVQNASRMDIILQVMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLK 183
            L +L F M+ Q      + D I Q M ++ K I SS N L++L     +LYKH +  +L 
Sbjct: 607  LIVLYFHMMVQLTLKFQQSDHISQGMSEYFKFIFSSSNLLDNLLTCTGLLYKHAEPIYLN 666

Query: 184  IWVIIANDLKEHIDGVKDTPFLKTEMDGDGCLAVCWFLSYPFMVCLHPQNLLSSDLS--- 354
            IWV +A  L   +         ++  DG+   ++C  L YP +       L SS+ S   
Sbjct: 667  IWVAVAQGLNYCVCNANCKSLKESLSDGNEYYSICHLLIYPIVAHSEVPRLTSSNASGSM 726

Query: 355  -----LLCPQVNLKNIVEVWKSLYGSVKCYAQREWSTMTTFHENLCGILNKVLNKNPD-- 513
                     + +L+ +++ WKSLYGS+   A    ST T F  +LC ++N+ L++N    
Sbjct: 727  EKYPVSADEKPSLELVIQTWKSLYGSLS--AGFGCSTTTNFSGDLCKLINRWLDENVSML 784

Query: 514  -GDTDLLKDKNQ-NLVLQHLCGEVAICLLTQLSDFD-NEALSAKVSDADFFLSNSIRNSL 684
               TD     N  +L + HL G   IC+L Q+   +     S   S+ D  +  SI+N L
Sbjct: 785  GSGTDFKLTYNDIDLGVLHLSGNFLICILEQIQTLELVSETSRSKSECDSKILYSIKNCL 844

Query: 685  EFIARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHPRMKHHILSLMEICSDPLVQWL 864
             F ++Y+ L     V D       T R+ SA+  FI H   K  IL  +EI S PL+QWL
Sbjct: 845  TFASKYMHLLRIKMVTDPPPSFVGTSRLSSALACFIDHLHRKQDILLFLEIISCPLLQWL 904

Query: 865  SIYAPMHVEMQEGSIVCQLELLWSEMINSLERSQPSITFDTSFLKVLAPVLKATLDQANS 1044
            S     ++ +Q       L+LLW+E+++SL RSQP + F ++ L++  P+ + TLD    
Sbjct: 905  S-----NMGVQNEGTNNNLKLLWNEILSSLRRSQPPLHFGSALLELHEPLFEKTLDHPYP 959

Query: 1045 AISKST 1062
            +IS++T
Sbjct: 960  SISEAT 965


>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  153 bits (386), Expect = 8e-35
 Identities = 96/239 (40%), Positives = 140/239 (58%), Gaps = 7/239 (2%)
 Frame = +1

Query: 4    LTILQFSMVAQSVQNASRMDIILQVMKKHLKLILSSCNPLEDLNAIICILYKHWDLAWLK 183
            LT+L   +   +  +A +M+ IL  ++KH K ++S  +PLE+L A I +LYKH  ++ L 
Sbjct: 622  LTMLYVYIAVHATFDAPKMEFILLGVQKHFKFLMSLYDPLENLCATIVLLYKHMRVSCLN 681

Query: 184  IWVIIANDLKEHIDGVKDTPFLKTEMDGDGCLAVCWFLSYPFMV--CLHPQNLLSSDLSL 357
            IWV IA  L+++I  VKD   LKTE+D  GCLAVC  LSYPF++  CL  Q+ L+     
Sbjct: 682  IWVAIAQGLEDYIKDVKDLSPLKTELDSYGCLAVCHLLSYPFVLRSCLPKQSSLTKISGS 741

Query: 358  LCPQVNLKNIVEVWKSLYGSVKCYAQREWSTMTTFHENLCGILNKVLNKNP---DGDTDL 528
               ++ L+++ EVWKSLYG V   ++ E S    F E+LC +L++ L++N    D DT+L
Sbjct: 742  SQRKLELEHVTEVWKSLYGFVNSASRFECSNTNIFSEDLCSMLSRCLDENSSKLDYDTEL 801

Query: 529  -LKDKNQNLVLQHLCGEVAICLLTQLSDFDNEALSAKVSDADFFLSNS-IRNSLEFIAR 699
               DK Q L L  LCG++ I +L         +   K  D D  +S+S I +SL  IAR
Sbjct: 802  DPSDKKQYLDLLSLCGDIVIYILEHTLTLRVNSEGTKNKDDDCSMSSSGINSSLGLIAR 860