BLASTX nr result

ID: Coptis25_contig00022337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022337
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]   179   2e-48
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]   173   1e-46
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]   175   3e-46
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]   169   7e-46
emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera]   168   7e-46

>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score =  179 bits (455), Expect(2) = 2e-48
 Identities = 87/198 (43%), Positives = 113/198 (57%)
 Frame = +1

Query: 370  VTGVYGPSNGLNIQEFWAELDDTFAFGSAYPWCIGGDFNVLRLSSDRRGGCHIDSRMVSF 549
            ++ VYGP+N    ++ W EL D     S   WC+GGDFNV+R SS++ GG  +   M  F
Sbjct: 934  LSAVYGPNNSALRKDLWVELSDIAGLASPR-WCVGGDFNVIRRSSEKLGGSRLTPSMKDF 992

Query: 550  DDFITRCELLDLPLKGGQFTWSSRQDNPSLSKLDRFLVSVDWEEDWPRLSQNVVPSSTSD 729
            DDFI+ CEL+DLPL+   FTWS+ Q NP   +LDRFL S +WE+ +P+  Q V+P  TSD
Sbjct: 993  DDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSD 1052

Query: 730  HHPIVLDNESGSRRPTVFRLELMWFDDPNFEENIKDWWNSFSFEGRPGVIFSXXXXXXXX 909
            H PIVL+       PT FR E MW   P+F+EN   WW  F   G  G  F         
Sbjct: 1053 HWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKA 1112

Query: 910  XXXVWNREVFGRMDRWKE 963
               VWN+  FG + + KE
Sbjct: 1113 KLKVWNKASFGELSKRKE 1130



 Score = 40.0 bits (92), Expect(2) = 2e-48
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 192  VDDIWGIIDVGWHFLPAVDTRGGVCILWDKGKVEVFETAVGTFTVSV 332
            V  +W   +  W  LPA    GG+ I+WD  K+   E  +G+F+VS+
Sbjct: 876  VGSVWTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSI 922


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score =  173 bits (439), Expect(2) = 1e-46
 Identities = 86/198 (43%), Positives = 111/198 (56%)
 Frame = +1

Query: 370  VTGVYGPSNGLNIQEFWAELDDTFAFGSAYPWCIGGDFNVLRLSSDRRGGCHIDSRMVSF 549
            ++ VYGP+     ++FW EL D     S   WC+GGDFNV+R SS++ GG      M  F
Sbjct: 768  LSAVYGPNISALRKDFWVELSDIAGLASPR-WCVGGDFNVIRRSSEKLGGSRXTPSMKXF 826

Query: 550  DDFITRCELLDLPLKGGQFTWSSRQDNPSLSKLDRFLVSVDWEEDWPRLSQNVVPSSTSD 729
            DDFI+ CEL+DLPL+   FTWS+ Q N    +LDRFL S +WE+ +P+  Q V+P  TSD
Sbjct: 827  DDFISDCELIDLPLRSASFTWSNMQVNXVCKRLDRFLYSNEWEQAFPQSIQGVLPRWTSD 886

Query: 730  HHPIVLDNESGSRRPTVFRLELMWFDDPNFEENIKDWWNSFSFEGRPGVIFSXXXXXXXX 909
            H PIVL+       PT FR E MW   P+F+EN   WW  F   G  G  F         
Sbjct: 887  HWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKA 946

Query: 910  XXXVWNREVFGRMDRWKE 963
               VWN+  FG + + KE
Sbjct: 947  KLKVWNKASFGELSKRKE 964



 Score = 40.4 bits (93), Expect(2) = 1e-46
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 192 VDDIWGIIDVGWHFLPAVDTRGGVCILWDKGKVEVFETAVGTFTVSV 332
           V  +W   +  W  LPA    GG+ I+WD  K+   E  +G+F+VS+
Sbjct: 710 VGSVWTARNKDWAALPACGASGGILIIWDAKKLSREEVVLGSFSVSI 756


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score =  175 bits (444), Expect(2) = 3e-46
 Identities = 87/199 (43%), Positives = 113/199 (56%), Gaps = 1/199 (0%)
 Frame = +1

Query: 370  VTGVYGPSNGLNIQEFWAELDDTFAFGSAYP-WCIGGDFNVLRLSSDRRGGCHIDSRMVS 546
            ++ VYGP+N    ++FW EL D    G AYP WC+GGDFNV+R SS + GG  +   M  
Sbjct: 857  LSAVYGPNNSTLRKDFWVELSDIV--GLAYPRWCVGGDFNVIRRSSKKLGGSRLTPSMKD 914

Query: 547  FDDFITRCELLDLPLKGGQFTWSSRQDNPSLSKLDRFLVSVDWEEDWPRLSQNVVPSSTS 726
            FDDFI  CEL+DLPL+   FTWS+ Q+NP   +LD FL S +WE+ +P+  Q V+P  TS
Sbjct: 915  FDDFIRDCELIDLPLRSASFTWSNMQENPVCKRLDCFLYSNEWEQVFPQSLQGVLPRWTS 974

Query: 727  DHHPIVLDNESGSRRPTVFRLELMWFDDPNFEENIKDWWNSFSFEGRPGVIFSXXXXXXX 906
            DH PIVL+       P  FR E MW   PNF+E+   WW  F   G  G  F        
Sbjct: 975  DHWPIVLETNPFKWGPMPFRFENMWLQHPNFKESFGRWWREFQGNGWEGHKFMRKLQFVK 1034

Query: 907  XXXXVWNREVFGRMDRWKE 963
                 WN+  FG + + K+
Sbjct: 1035 DKLKEWNKASFGELSKRKK 1053



 Score = 37.0 bits (84), Expect(2) = 3e-46
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 192 VDDIWGIIDVGWHFLPAVDTRGGVCILWDKGKVEVFETAVGTFTVSV 332
           V  +W   +  W  LPA    GG+ I+W+  K+   E  +G+F+VS+
Sbjct: 799 VGSVWTARNKDWAALPASGASGGILIIWEAKKLCREEVVLGSFSVSI 845


>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score =  169 bits (427), Expect(2) = 7e-46
 Identities = 83/199 (41%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
 Frame = +1

Query: 370  VTGVYGPSNGLNIQEFWAELDDTFAFGSAYP-WCIGGDFNVLRLSSDRRGGCHIDSRMVS 546
            ++ VYGP+N    ++FW EL D    G ++P WC+GGDFNV+R SS++ GG  +   M  
Sbjct: 861  LSAVYGPNNSALRKDFWVELSDIA--GLSHPRWCVGGDFNVIRRSSEKLGGSRLTPCMKD 918

Query: 547  FDDFITRCELLDLPLKGGQFTWSSRQDNPSLSKLDRFLVSVDWEEDWPRLSQNVVPSSTS 726
            FD+FI  CEL+D PL+   +TWS+ Q+NP   +LDRFL S +WE+ +P+  Q V+P  TS
Sbjct: 919  FDEFIRDCELIDSPLRSVSYTWSNMQENPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTS 978

Query: 727  DHHPIVLDNESGSRRPTVFRLELMWFDDPNFEENIKDWWNSFSFEGRPGVIFSXXXXXXX 906
            DH PIVL+       PT FR E MW    +F+EN   WW+ F   G  G  F        
Sbjct: 979  DHWPIVLETNPFKWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFVK 1038

Query: 907  XXXXVWNREVFGRMDRWKE 963
                 WN+  FG + + K+
Sbjct: 1039 AKLKEWNKTSFGELSKKKK 1057



 Score = 42.4 bits (98), Expect(2) = 7e-46
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 189 VVDDIWGIIDVGWHFLPAVDTRGGVCILWDKGKVEVFETAVGTFTVSV 332
           +V  +W + +  W  LPA    GG+ I+WD  K+   E  +G+F+VS+
Sbjct: 802 LVGSVWSVRNKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVSI 849


>emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera]
          Length = 1323

 Score =  168 bits (426), Expect(2) = 7e-46
 Identities = 84/199 (42%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
 Frame = +1

Query: 370 VTGVYGPSNGLNIQEFWAELDDTFAFGSAYP-WCIGGDFNVLRLSSDRRGGCHIDSRMVS 546
           ++ VYGP++    ++FW +L D F  G ++P WC+GGDFNV+R SS++ GG  + S M  
Sbjct: 396 ISTVYGPNSPSLRKDFWVKLLDIF--GLSFPLWCVGGDFNVIRRSSEKLGGSSLTSSMKD 453

Query: 547 FDDFITRCELLDLPLKGGQFTWSSRQDNPSLSKLDRFLVSVDWEEDWPRLSQNVVPSSTS 726
           FD FI  CELLD PL+   FTWS+ Q++    +LDRFL S +W + +P+  Q  VP  TS
Sbjct: 454 FDSFIRECELLDPPLQNASFTWSNLQESSVCKRLDRFLYSNEWGQLFPQGLQEAVPRRTS 513

Query: 727 DHHPIVLDNESGSRRPTVFRLELMWFDDPNFEENIKDWWNSFSFEGRPGVIFSXXXXXXX 906
           DH PIVLD       PT+FR E MW   P+F+EN ++WW  F   G  G  F        
Sbjct: 514 DHWPIVLDTNPFKWGPTLFRFENMWLQHPSFKENFRNWWRGFQGNGWEGHKFMRRLQFVK 573

Query: 907 XXXXVWNREVFGRMDRWKE 963
                WN+  FG +   K+
Sbjct: 574 ANLKEWNKVSFGELKERKK 592



 Score = 42.7 bits (99), Expect(2) = 7e-46
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 192 VDDIWGIIDVGWHFLPAVDTRGGVCILWDKGKVEVFETAVGTFTVSV 332
           V  +W + +  W  LPA    GG+ I+WD  K+   E  +G+F+VS+
Sbjct: 338 VGSVWTVRNKDWAALPACGALGGILIIWDSKKLRSEEVLIGSFSVSI 384


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