BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022327
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform...   160   1e-37
ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ric...   155   2e-36
ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like is...   152   2e-35
gb|ACU20454.1| unknown [Glycine max]                                  152   2e-35

>ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera]
           gi|296086584|emb|CBI32219.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/92 (84%), Positives = 85/92 (92%)
 Frame = +2

Query: 2   GPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELS 181
           GPMVYGCLYC+ SY +TLSTL+FADSKTLKEEKREELFENLKADESIGWAVD+IDP ELS
Sbjct: 29  GPMVYGCLYCARSYHNTLSTLNFADSKTLKEEKREELFENLKADESIGWAVDVIDPWELS 88

Query: 182 AKMLKRTKINLNEISHDSASGLVARVLELGVL 277
           AKMLK+ KINLNEISHDSA GL+ RVL +GVL
Sbjct: 89  AKMLKKNKINLNEISHDSAIGLITRVLNMGVL 120


>ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|222850829|gb|EEE88376.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/92 (84%), Positives = 84/92 (91%)
 Frame = +2

Query: 2   GPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELS 181
           GPMVYGCLYC+ SY+ TLSTL FADSKTLKEEKREELFE LKA+E IGWAVD+IDPRELS
Sbjct: 29  GPMVYGCLYCARSYEKTLSTLKFADSKTLKEEKREELFEKLKANELIGWAVDVIDPRELS 88

Query: 182 AKMLKRTKINLNEISHDSASGLVARVLELGVL 277
           AKMLK+ KINLNEISHDSASGLV RVL +GVL
Sbjct: 89  AKMLKKIKINLNEISHDSASGLVTRVLNMGVL 120


>ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ricinus communis]
           gi|223545084|gb|EEF46595.1| ribonuclease hi large
           subunit, putative [Ricinus communis]
          Length = 299

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/92 (82%), Positives = 85/92 (92%)
 Frame = +2

Query: 2   GPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELS 181
           GPMVYGCLYC+ SY+ TLSTLSFADSKTLKE+KREELFENLKA+ESIGWAVD+IDPRELS
Sbjct: 31  GPMVYGCLYCARSYERTLSTLSFADSKTLKEDKREELFENLKANESIGWAVDVIDPRELS 90

Query: 182 AKMLKRTKINLNEISHDSASGLVARVLELGVL 277
           AKML++ KINLNEISH+SA GL+ RVL  GVL
Sbjct: 91  AKMLQKNKINLNEISHESAIGLITRVLNEGVL 122


>ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like isoform 1 [Glycine max]
          Length = 297

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/92 (81%), Positives = 82/92 (89%)
 Frame = +2

Query: 2   GPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELS 181
           GPMVYGCLYCS SY  TLSTLSFADSKTLKEEKREELFE LK ++SIGW VD+IDPRELS
Sbjct: 28  GPMVYGCLYCSQSYLKTLSTLSFADSKTLKEEKREELFETLKLNDSIGWDVDVIDPRELS 87

Query: 182 AKMLKRTKINLNEISHDSASGLVARVLELGVL 277
           AKMLK+ KINLNEISH SA GL+ RVL++GVL
Sbjct: 88  AKMLKKNKINLNEISHSSAMGLIDRVLKMGVL 119


>gb|ACU20454.1| unknown [Glycine max]
          Length = 219

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/92 (81%), Positives = 82/92 (89%)
 Frame = +2

Query: 2   GPMVYGCLYCSVSYKDTLSTLSFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELS 181
           GPMVYGCLYCS SY  TLSTLSFADSKTLKEEKREELFE LK ++SIGW VD+IDPRELS
Sbjct: 28  GPMVYGCLYCSQSYLKTLSTLSFADSKTLKEEKREELFETLKLNDSIGWDVDVIDPRELS 87

Query: 182 AKMLKRTKINLNEISHDSASGLVARVLELGVL 277
           AKMLK+ KINLNEISH SA GL+ RVL++GVL
Sbjct: 88  AKMLKKNKINLNEISHSSAMGLIDRVLKMGVL 119