BLASTX nr result

ID: Coptis25_contig00022326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022326
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16946.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera] gi...   187   1e-45
ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vi...   187   1e-45
emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]   187   1e-45
ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [S...   184   8e-45

>emb|CBI16946.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  187 bits (474), Expect = 1e-45
 Identities = 81/101 (80%), Positives = 91/101 (90%)
 Frame = -3

Query: 305 SCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNYKEYWRVKISITNFNY 126
           SCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+YKEYWRVK++ITNFNY
Sbjct: 264 SCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNY 323

Query: 125 RMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAM 3
           RMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAM
Sbjct: 324 RMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAM 364


>ref|XP_002264600.1| PREDICTED: protein COBRA [Vitis vinifera]
           gi|297734083|emb|CBI15330.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  187 bits (474), Expect = 1e-45
 Identities = 81/101 (80%), Positives = 90/101 (89%)
 Frame = -3

Query: 305 SCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNYKEYWRVKISITNFNY 126
           SCV PN+PYLAS + G  K S+ PLVQCT+HMCPIR+HWHVKLNYK+YWRVKI+ITNFNY
Sbjct: 264 SCVDPNNPYLASVVEGSGKTSYQPLVQCTSHMCPIRVHWHVKLNYKDYWRVKITITNFNY 323

Query: 125 RMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAM 3
           RMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAM
Sbjct: 324 RMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAM 364


>ref|XP_002281199.1| PREDICTED: protein COBRA isoform 1 [Vitis vinifera]
          Length = 456

 Score =  187 bits (474), Expect = 1e-45
 Identities = 81/101 (80%), Positives = 91/101 (90%)
 Frame = -3

Query: 305 SCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNYKEYWRVKISITNFNY 126
           SCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+YKEYWRVK++ITNFNY
Sbjct: 264 SCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNY 323

Query: 125 RMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAM 3
           RMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAM
Sbjct: 324 RMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAM 364


>emb|CAN68249.1| hypothetical protein VITISV_020126 [Vitis vinifera]
          Length = 469

 Score =  187 bits (474), Expect = 1e-45
 Identities = 81/101 (80%), Positives = 91/101 (90%)
 Frame = -3

Query: 305 SCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNYKEYWRVKISITNFNY 126
           SCV  +SPYLAS ++G  KNS+TPLVQCT HMCPIR+HWHVKL+YKEYWRVK++ITNFNY
Sbjct: 264 SCVEEDSPYLASVVSGSGKNSYTPLVQCTKHMCPIRVHWHVKLSYKEYWRVKVTITNFNY 323

Query: 125 RMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAM 3
           RMNYTQWNLV QHPNFDNLT  FSFNYKS+TP+A INDTAM
Sbjct: 324 RMNYTQWNLVVQHPNFDNLTQIFSFNYKSLTPYAAINDTAM 364


>ref|XP_002460985.1| hypothetical protein SORBIDRAFT_02g038720 [Sorghum bicolor]
           gi|241924362|gb|EER97506.1| hypothetical protein
           SORBIDRAFT_02g038720 [Sorghum bicolor]
          Length = 458

 Score =  184 bits (466), Expect = 8e-45
 Identities = 79/101 (78%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 SCVMPNSPYLASAIAGPRKNSFTPLVQCTTHMCPIRIHWHVKLNYKEYWRVKISITNFNY 126
           SCV  NSPYLAS +  P KNS  PLVQCT+HMCPIR+HWHVK+NYKEYWRVKI++TNFNY
Sbjct: 265 SCVEGNSPYLASVVNDPNKNSLAPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNY 324

Query: 125 RMNYTQWNLVAQHPNFDNLTTSFSFNYKSITPFATINDTAM 3
           RMNY+QWNLVAQHPNFDNLTT FSFNYK + P+  INDTAM
Sbjct: 325 RMNYSQWNLVAQHPNFDNLTTIFSFNYKPLNPYGVINDTAM 365


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