BLASTX nr result

ID: Coptis25_contig00022325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022325
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasilie...   118   2e-24
gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasilie...   117   5e-24
ref|XP_002305817.1| predicted protein [Populus trichocarpa] gi|1...   104   4e-20
ref|XP_004151585.1| PREDICTED: uncharacterized protein LOC101218...   104   5e-20
gb|ADK13071.1| conserved hypothetical protein 14 [Hevea brasilie...   103   6e-20

>gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasiliensis]
          Length = 176

 Score =  118 bits (296), Expect = 2e-24
 Identities = 73/171 (42%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
 Frame = +1

Query: 223 VISMDQSVNMGKESAVCEE--MICPKPRRVGSLNYNTVN-------------DSKAGMEL 357
           + S DQ+   G  S    +  ++CPKPRRVG L  N                DSKAG EL
Sbjct: 11  IASCDQTETRGLVSIFDSKGPVVCPKPRRVGILANNPSRPLRWHMSHQAEMCDSKAGAEL 70

Query: 358 LDIILSKGGSGTEHSINHXXXXXXXXXXXXXXRASNPLVQDVHFGDGKLTXXXXXXXXXX 537
           LDIIL K G GTE S NH              RA+NP++QD  FGD KLT          
Sbjct: 71  LDIILMKDGHGTEQSANHVASPLPFFCGSPPTRAANPVIQDARFGDEKLT-----PVSPL 125

Query: 538 XXXXXXXXXXXXTRKGSCARAKFGHSPAPVRIEGFDCLNSDRRNRSVPAVA 690
                       +RKG C R KFG  PA VR+EGFDCLN DR+N S+PA+A
Sbjct: 126 LIPSPSSLSSPTSRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


>gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasiliensis]
          Length = 176

 Score =  117 bits (293), Expect = 5e-24
 Identities = 68/150 (45%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
 Frame = +1

Query: 280 MICPKPRRVGSLNYNTVN-------------DSKAGMELLDIILSKGGSGTEHSINHXXX 420
           ++CPKPRRVG L  N                DSKAG ELLDIIL K G GTE S NH   
Sbjct: 32  VVCPKPRRVGILANNPSRPLRWHMSHQAEMCDSKAGAELLDIILMKDGHGTEQSANHVAS 91

Query: 421 XXXXXXXXXXXRASNPLVQDVHFGDGKLTXXXXXXXXXXXXXXXXXXXXXXTRKGSCARA 600
                      RA+NP++QD  FGD KLT                      +RKG C R 
Sbjct: 92  PLPFFCGSPPTRAANPVIQDARFGDEKLT-----PVSPLLIPSPSSLSSPTSRKGGCVRM 146

Query: 601 KFGHSPAPVRIEGFDCLNSDRRNRSVPAVA 690
           KFG  PA VR+EGFDCLN DR+N S+PA+A
Sbjct: 147 KFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


>ref|XP_002305817.1| predicted protein [Populus trichocarpa] gi|118485359|gb|ABK94537.1|
           unknown [Populus trichocarpa]
           gi|222848781|gb|EEE86328.1| predicted protein [Populus
           trichocarpa]
          Length = 178

 Score =  104 bits (260), Expect = 4e-20
 Identities = 66/151 (43%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
 Frame = +1

Query: 280 MICPKPRRVGSLNYNT-------------VNDSKAGMELLDIILSKGGSGTEHSINHXXX 420
           ++CPKPRRVG L  N              V D KAG ELLDIIL K G   +HS      
Sbjct: 31  VVCPKPRRVGILANNPIRPLRWPVSHQAEVGDWKAGAELLDIILMKEGHEPDHSATQVVS 90

Query: 421 XXXXXXXXXXX-RASNPLVQDVHFGDGKLTXXXXXXXXXXXXXXXXXXXXXXTRKGSCAR 597
                       R  NPL+QD  FGD KLT                       RKG CAR
Sbjct: 91  SPPPFFCGSPPSRVGNPLIQDARFGDDKLTPMSPLSIPSPSGLSSPSSS---ARKGGCAR 147

Query: 598 AKFGHSPAPVRIEGFDCLNSDRRNRSVPAVA 690
            KFG  PA VR+EGFDCLN DR+N S+PAVA
Sbjct: 148 MKFGLKPAMVRVEGFDCLNRDRQNSSIPAVA 178


>ref|XP_004151585.1| PREDICTED: uncharacterized protein LOC101218020 [Cucumis sativus]
           gi|449484546|ref|XP_004156912.1| PREDICTED:
           uncharacterized LOC101218020 [Cucumis sativus]
          Length = 174

 Score =  104 bits (259), Expect = 5e-20
 Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
 Frame = +1

Query: 226 ISMDQSVNMGKESAVCEEMICPKPRRVGSLNYNTVN-----------DSKAGMELLDIIL 372
           +S +++      S + + ++CPKPRR+  L  N +            DSKAG +LLDIIL
Sbjct: 12  LSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDSKAGADLLDIIL 71

Query: 373 SKGGSGTEHSINHXXXXXXXXXXXXXXRASNPLVQDVHFGDGKLTXXXXXXXXXXXXXXX 552
            KG   +E S  H              RASNPL+QD  FGD KL+               
Sbjct: 72  KKG---SEQSSAHVASSPPFFSGSPPSRASNPLIQDARFGDEKLSPMPALPAYSPSGLSS 128

Query: 553 XXXXXXXTRKGSCARAKFGHSPAPVRIEGFDCLNSDRRNRSVPAVA 690
                   + G CAR KFG  PA VR+EGFDCL+ DR+N  +PAVA
Sbjct: 129 PSSASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA 174


>gb|ADK13071.1| conserved hypothetical protein 14 [Hevea brasiliensis]
          Length = 157

 Score =  103 bits (258), Expect = 6e-20
 Identities = 69/171 (40%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
 Frame = +1

Query: 223 VISMDQSVNMGKESAVCEE--MICPKPRRVGSLNYNTVN-------------DSKAGMEL 357
           + S DQ+   G  S    +  ++CPKPRRVG L  N                DSKAG EL
Sbjct: 11  IASCDQTETRGLVSIFDSKGPVVCPKPRRVGILANNPSRPLRWHMSHQAEMCDSKAGAEL 70

Query: 358 LDIILSKGGSGTEHSINHXXXXXXXXXXXXXXRASNPLVQDVHFGDGKLTXXXXXXXXXX 537
           LDIIL K G GTE S                   +NP++QD  FGD KLT          
Sbjct: 71  LDIILMKDGHGTEQS-------------------ANPVIQDARFGDEKLTPVSPLLIPSP 111

Query: 538 XXXXXXXXXXXXTRKGSCARAKFGHSPAPVRIEGFDCLNSDRRNRSVPAVA 690
                       +RKG C R KFG  PA VR+EGFDCLN DR+N S+PA+A
Sbjct: 112 SSLSSPT-----SRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 157


Top