BLASTX nr result

ID: Coptis25_contig00022319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022319
         (1762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso...   465   e-128
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2...   458   e-127
ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putativ...   454   e-125
ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124
ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779...   445   e-122

>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
            gi|297741413|emb|CBI32544.3| unnamed protein product
            [Vitis vinifera]
          Length = 529

 Score =  465 bits (1196), Expect = e-128
 Identities = 266/455 (58%), Positives = 309/455 (67%), Gaps = 22/455 (4%)
 Frame = +2

Query: 20   KDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI-----SDG 184
            KDE+L FVAGATG+VGSRTVRELLKLGFRVRAGVR+AQ+AE L+QSVKQ+ +     S+G
Sbjct: 78   KDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEG 137

Query: 185  ASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLID 361
               VEKLEIVECDLE+ D+I PA+ NASVV+CCIGASEKEVFD+TGPYRIDY ATKNLID
Sbjct: 138  TQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATKNLID 197

Query: 362  AATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGM 541
            AATVA V+HFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVRPGGM
Sbjct: 198  AATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVRPGGM 257

Query: 542  ERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPL 721
            ERPTDAYKETHN++LS+EDTLFGGQVSNLQVAEL+AFM KNR  SYCKVVEVIAETTAPL
Sbjct: 258  ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAETTAPL 317

Query: 722  SPFGELLSKIPSQWVDRSSVKDSSIKEEEVKPVSS-------FAEDXXXXXXXXXXXXXX 880
            +PFGELL+KIPSQ VD S  +  +       PV S         +               
Sbjct: 318  TPFGELLAKIPSQRVDVSPKESDAADGPAPVPVVSGPPPSTPIEKGPPQGKATAMSPLSP 377

Query: 881  YSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAV-SEPAIAASQIDVSALTTEARSSTVKLH 1057
            Y VY+DLK                    V  + +EP    S ++  +      +   +  
Sbjct: 378  YIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKEAIQEEAK 437

Query: 1058 DTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITG-ETPTKVL 1234
             TRPLSPY VY+DLK         SAP     V+   T      S+  NI+G  T     
Sbjct: 438  KTRPLSPYIVYDDLKPPTSPSP--SAP----TVSLPSTLPMEGGSKIDNISGNNTAQPPA 491

Query: 1235 AEVPTPKTSY-------LSPYPVYDDLKPPTSPSP 1318
            A++P  +  +       LSP+ +Y+DLKPPTSPSP
Sbjct: 492  ADIPKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSP 526



 Score = 68.2 bits (165), Expect(2) = 2e-10
 Identities = 46/106 (43%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
 Frame = +2

Query: 1067 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETP-----TKV 1231
            PLSPY VYEDLK           P      A  P  + +P+   S  +   P      K 
Sbjct: 374  PLSPYIVYEDLKPPTSPTP---TPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKE 430

Query: 1232 LAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1369
              +    KT  LSPY VYDDLKPPTSPSP AP VS  ST   E GS
Sbjct: 431  AIQEEAKKTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGS 476



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 1396 YEDLKRPCSPVPSPKQC 1446
            YEDLK P S  PSP QC
Sbjct: 515  YEDLKPPTS--PSPSQC 529


>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  458 bits (1179), Expect(2) = e-127
 Identities = 268/472 (56%), Positives = 317/472 (67%), Gaps = 16/472 (3%)
 Frame = +2

Query: 2    NQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS- 178
            ++++ +KDENL FVAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE L QSVK++ +  
Sbjct: 63   SKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALAQSVKEMKLDV 122

Query: 179  DGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNL 355
            +G+  VE+LE VECDLE+ ++I PA+ NASVV+CCIGASEKEVFDVTGP RIDY+ATKNL
Sbjct: 123  EGSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFDVTGPCRIDYRATKNL 182

Query: 356  IDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPG 535
            +DAATVA VDHFI+++SLGTNK GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPG
Sbjct: 183  VDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPG 242

Query: 536  GMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTA 715
            GMERPTDAYKETHN+++S+EDTLFGGQVSNLQVAE MAFM KNR LSYCKVVEVIAETTA
Sbjct: 243  GMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKVVEVIAETTA 302

Query: 716  PLSPFGELLSKIPSQWVD---------RSSVKDSSIKEEEVKPVSSFAEDXXXXXXXXXX 868
            PL+P  ELL+KIPSQ V+           SV    ++ E   P S    +          
Sbjct: 303  PLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPSQ--REPAQAKAVVTR 360

Query: 869  XXXXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTV 1048
                Y+ Y+DLK                +V  V+AVS           ++   E + + V
Sbjct: 361  PLSPYTAYEDLKPPTSPIPTQPSGKKE-NVNSVEAVSMLDTPDPSPASASGIAETKPAPV 419

Query: 1049 KLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPT-----NEAVPSSEYSNITG 1213
            +    RPLSPY  Y+DLK         +AP  G V    P      N A P++   N   
Sbjct: 420  ETKTARPLSPYVAYDDLKPPTSPSP--TAP-VGLVAITAPAVPKTGNSAPPTAAIDNQHH 476

Query: 1214 ETPTKVLAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1369
            E P       P P    LSPYP+YDDLKPPTSPSP AP     +TS+  A S
Sbjct: 477  EEPN------PRP----LSPYPIYDDLKPPTSPSPTAPVGLVATTSSINAVS 518



 Score = 26.2 bits (56), Expect(2) = e-127
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 1396 YEDLKRPCSPVPSPK 1440
            YEDLK P SP PS K
Sbjct: 549  YEDLKPPASPTPSLK 563


>ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223541766|gb|EEF43314.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 584

 Score =  454 bits (1169), Expect = e-125
 Identities = 260/471 (55%), Positives = 312/471 (66%), Gaps = 17/471 (3%)
 Frame = +2

Query: 20   KDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAV 196
            KD+NL FVAGATG+VGSRTVRELLKLGF+VRAGVRSAQRA+TLVQSVKQ+ +  +GA  +
Sbjct: 78   KDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGAQPI 137

Query: 197  EKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATV 373
            EK EI+ECDL++ + I  A+ NAS+V+CCIGA EKEVFD TGPYRIDYQAT+NLIDAATV
Sbjct: 138  EKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDAATV 197

Query: 374  AGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPT 553
            A V HFI+++SLGTNK+GFPAAILNLFWGVL WKRKAEEALIASG+PYTIVRPGGMERPT
Sbjct: 198  AKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGMERPT 257

Query: 554  DAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFG 733
            DAYKETHN++LS+EDTLFGGQVSNLQVAELMA M KN DLSYCKVVEVIAETTAPL+   
Sbjct: 258  DAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLTTMD 317

Query: 734  ELLSKIPSQWVDRSS---------VKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXXXXYS 886
            +LL++IPSQ +                + +  E  +P S+  ++              Y+
Sbjct: 318  KLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEPEQPKATVSRPLSPYT 377

Query: 887  VYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTT---EARSSTVKLH 1057
             YDDLK              N     V AV++P    +Q   S L +   E++ +TV+  
Sbjct: 378  AYDDLK-PPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQTSSSGLASAIPESKPATVEAK 436

Query: 1058 DTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVLA 1237
               PLSPY  Y DLK         S  +      A  T +   S+   N          A
Sbjct: 437  IAGPLSPYAAYPDLKPPTSPSPKPSGSKE-IPSGASSTEKVESSATGDNDVATITANNDA 495

Query: 1238 EVPTPK-TSYLSPYPVYDDLKPPTSPSPYAP--KVSPLSTSTTEAGSLSSP 1381
            E P P+ +S  SP+ VYDDLKPPTSPSP AP   V P ST+       S+P
Sbjct: 496  ENPPPEFSSGHSPFLVYDDLKPPTSPSPIAPVGSVPPSSTNEVPKAGNSAP 546


>ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  450 bits (1157), Expect = e-124
 Identities = 256/453 (56%), Positives = 308/453 (67%), Gaps = 14/453 (3%)
 Frame = +2

Query: 2    NQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS- 178
            ++++ +KDENL FVAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE LVQSV  + +  
Sbjct: 72   SKEVETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALVQSVMAMKLDV 131

Query: 179  DGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNL 355
            +G+  VE+L+IVECDLE+ ++I PA+ NASV++CCIGA EKEVFDVTGPYRIDY ATKNL
Sbjct: 132  EGSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFDVTGPYRIDYLATKNL 191

Query: 356  IDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPG 535
            +DAAT   V+HFI+++SLGTNK+GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPG
Sbjct: 192  VDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPG 251

Query: 536  GMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTA 715
            GMERPTDAYKETHN++LS+EDTLFGG VSNLQVAELMAFM  NR LSYCKVVEVIAETTA
Sbjct: 252  GMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRRLSYCKVVEVIAETTA 311

Query: 716  PLSPFGELLSKIPSQWVDRSSVKDSSIKE-------EEVKPVSSFAEDXXXXXXXXXXXX 874
            PL+P  ELL+KIPSQ V+    + + + +       E   P S   ++            
Sbjct: 312  PLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQAKAMVTRPL 371

Query: 875  XXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTVKL 1054
              Y+ YDDLK                    ++AVS+PA   +    +    E +   V+ 
Sbjct: 372  SPYTAYDDLKPPTSPTPIQPSSKKES-AGPLEAVSKPATQDTPPMPAPGVAETKPGPVET 430

Query: 1055 HDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVL 1234
              TRPLSPY  Y DLK         +AP  G V+    TN AVP       TG     + 
Sbjct: 431  KTTRPLSPYAAYADLKPPTSPSP--TAP-VGSVIPTSSTN-AVPE------TGNRAPPMA 480

Query: 1235 AEV-----PTPKTSYLSPYPVYDDLKPPTSPSP 1318
            A +       PK   LSPYP+Y+DLKPP SP+P
Sbjct: 481  AAIDKQHHTEPKQKPLSPYPMYEDLKPPASPTP 513


>ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]
          Length = 528

 Score =  445 bits (1144), Expect = e-122
 Identities = 258/458 (56%), Positives = 306/458 (66%), Gaps = 24/458 (5%)
 Frame = +2

Query: 17   SKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI---SDGA 187
            SKD+NLVFVAGATG+VGSRTVREL+KLGFRVRAGVRSAQRA  LVQSV+QL +   S G 
Sbjct: 79   SKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQLKLDGASGGG 138

Query: 188  SAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDA 364
             AVEKLEIVECDLE+ + I  A+ +AS V+C IGASEKEVFD+TGP+RIDYQATKNLIDA
Sbjct: 139  QAVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFRIDYQATKNLIDA 198

Query: 365  ATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGME 544
            ATVA V+HFIL+TSLGTNKIGFPAAILNLFWGVL+WKRKAEEAL+ASGLPYTIVRPGGME
Sbjct: 199  ATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGLPYTIVRPGGME 258

Query: 545  RPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLS 724
            RPTDA+KETHN++LS EDTLFGG VSNLQ+AEL+A M KNRDLSYCK+VE IAETTAPL+
Sbjct: 259  RPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVEAIAETTAPLT 318

Query: 725  PFGELLSKIPSQW----------VDRSSVKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXX 874
            P  ELL+KIPSQ           +   SV D       V+P  +  ++            
Sbjct: 319  PMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPL 378

Query: 875  XXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIA---ASQIDVSALTTEARSST 1045
              Y VYDDLK                   + + V +P+ +   +S   V  ++    SS 
Sbjct: 379  SPYIVYDDLK--PPSSPSPSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSK 436

Query: 1046 VKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPT 1225
            V+    +PLSPY  Y DLK          +P    V  + P    VP  E   I+   P 
Sbjct: 437  VE----KPLSPYVAYPDLKPPTS-----PSPNAPTVSVSTPAAAGVP--EIDTISSNGPA 485

Query: 1226 KVLA-------EVPTPKTSYLSPYPVYDDLKPPTSPSP 1318
            ++ A        +P PK+  LSPY +Y+DLKPP SPSP
Sbjct: 486  QLSAADEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSP 523



 Score = 64.7 bits (156), Expect(2) = 3e-09
 Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
 Frame = +2

Query: 965  VQAVSEPAIAASQIDVSA-LTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPR 1141
            + AVS P   A+ + V   + T+  ++  K    +PLSPY VY+DLK         S+P 
Sbjct: 342  IAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPP-------SSPS 394

Query: 1142 RGFVVAAQPT--NEAVPSSEYSNITGETP-------TKVLAEVPTPKTSYLSPYPVYDDL 1294
                   +PT  +E VP    S+     P       T   ++V  P    LSPY  Y DL
Sbjct: 395  PSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKP----LSPYVAYPDL 450

Query: 1295 KPPTSPSPYAPKVS---PLSTSTTEAGSLSS 1378
            KPPTSPSP AP VS   P +    E  ++SS
Sbjct: 451  KPPTSPSPNAPTVSVSTPAAAGVPEIDTISS 481



 Score = 24.6 bits (52), Expect(2) = 3e-09
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1

Query: 1396 YEDLKRPCSPVPS 1434
            YEDLK P SP PS
Sbjct: 512  YEDLKPPASPSPS 524


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