BLASTX nr result
ID: Coptis25_contig00022319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00022319
(1762 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic iso... 465 e-128
ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|2... 458 e-127
ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putativ... 454 e-125
ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|2... 450 e-124
ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779... 445 e-122
>ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera]
gi|297741413|emb|CBI32544.3| unnamed protein product
[Vitis vinifera]
Length = 529
Score = 465 bits (1196), Expect = e-128
Identities = 266/455 (58%), Positives = 309/455 (67%), Gaps = 22/455 (4%)
Frame = +2
Query: 20 KDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI-----SDG 184
KDE+L FVAGATG+VGSRTVRELLKLGFRVRAGVR+AQ+AE L+QSVKQ+ + S+G
Sbjct: 78 KDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEALIQSVKQMKLDVESASEG 137
Query: 185 ASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLID 361
VEKLEIVECDLE+ D+I PA+ NASVV+CCIGASEKEVFD+TGPYRIDY ATKNLID
Sbjct: 138 TQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFDITGPYRIDYMATKNLID 197
Query: 362 AATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGM 541
AATVA V+HFILLTSLGTNK+GFPAAILNLFWGVLIWKRKAEEAL ASGLPYTIVRPGGM
Sbjct: 198 AATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEEALFASGLPYTIVRPGGM 257
Query: 542 ERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPL 721
ERPTDAYKETHN++LS+EDTLFGGQVSNLQVAEL+AFM KNR SYCKVVEVIAETTAPL
Sbjct: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRGSSYCKVVEVIAETTAPL 317
Query: 722 SPFGELLSKIPSQWVDRSSVKDSSIKEEEVKPVSS-------FAEDXXXXXXXXXXXXXX 880
+PFGELL+KIPSQ VD S + + PV S +
Sbjct: 318 TPFGELLAKIPSQRVDVSPKESDAADGPAPVPVVSGPPPSTPIEKGPPQGKATAMSPLSP 377
Query: 881 YSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAV-SEPAIAASQIDVSALTTEARSSTVKLH 1057
Y VY+DLK V + +EP S ++ + + +
Sbjct: 378 YIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKEAIQEEAK 437
Query: 1058 DTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITG-ETPTKVL 1234
TRPLSPY VY+DLK SAP V+ T S+ NI+G T
Sbjct: 438 KTRPLSPYIVYDDLKPPTSPSP--SAP----TVSLPSTLPMEGGSKIDNISGNNTAQPPA 491
Query: 1235 AEVPTPKTSY-------LSPYPVYDDLKPPTSPSP 1318
A++P + + LSP+ +Y+DLKPPTSPSP
Sbjct: 492 ADIPKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSP 526
Score = 68.2 bits (165), Expect(2) = 2e-10
Identities = 46/106 (43%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +2
Query: 1067 PLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETP-----TKV 1231
PLSPY VYEDLK P A P + +P+ S + P K
Sbjct: 374 PLSPYIVYEDLKPPTSPTP---TPSTSSSTARAPDVDGIPAEPKSIPSVLEPLSTVLAKE 430
Query: 1232 LAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1369
+ KT LSPY VYDDLKPPTSPSP AP VS ST E GS
Sbjct: 431 AIQEEAKKTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGS 476
Score = 25.4 bits (54), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 1396 YEDLKRPCSPVPSPKQC 1446
YEDLK P S PSP QC
Sbjct: 515 YEDLKPPTS--PSPSQC 529
>ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1|
predicted protein [Populus trichocarpa]
Length = 564
Score = 458 bits (1179), Expect(2) = e-127
Identities = 268/472 (56%), Positives = 317/472 (67%), Gaps = 16/472 (3%)
Frame = +2
Query: 2 NQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS- 178
++++ +KDENL FVAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE L QSVK++ +
Sbjct: 63 SKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALAQSVKEMKLDV 122
Query: 179 DGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNL 355
+G+ VE+LE VECDLE+ ++I PA+ NASVV+CCIGASEKEVFDVTGP RIDY+ATKNL
Sbjct: 123 EGSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFDVTGPCRIDYRATKNL 182
Query: 356 IDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPG 535
+DAATVA VDHFI+++SLGTNK GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPG
Sbjct: 183 VDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPG 242
Query: 536 GMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTA 715
GMERPTDAYKETHN+++S+EDTLFGGQVSNLQVAE MAFM KNR LSYCKVVEVIAETTA
Sbjct: 243 GMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRGLSYCKVVEVIAETTA 302
Query: 716 PLSPFGELLSKIPSQWVD---------RSSVKDSSIKEEEVKPVSSFAEDXXXXXXXXXX 868
PL+P ELL+KIPSQ V+ SV ++ E P S +
Sbjct: 303 PLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPSQ--REPAQAKAVVTR 360
Query: 869 XXXXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTV 1048
Y+ Y+DLK +V V+AVS ++ E + + V
Sbjct: 361 PLSPYTAYEDLKPPTSPIPTQPSGKKE-NVNSVEAVSMLDTPDPSPASASGIAETKPAPV 419
Query: 1049 KLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPT-----NEAVPSSEYSNITG 1213
+ RPLSPY Y+DLK +AP G V P N A P++ N
Sbjct: 420 ETKTARPLSPYVAYDDLKPPTSPSP--TAP-VGLVAITAPAVPKTGNSAPPTAAIDNQHH 476
Query: 1214 ETPTKVLAEVPTPKTSYLSPYPVYDDLKPPTSPSPYAPKVSPLSTSTTEAGS 1369
E P P P LSPYP+YDDLKPPTSPSP AP +TS+ A S
Sbjct: 477 EEPN------PRP----LSPYPIYDDLKPPTSPSPTAPVGLVATTSSINAVS 518
Score = 26.2 bits (56), Expect(2) = e-127
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 1396 YEDLKRPCSPVPSPK 1440
YEDLK P SP PS K
Sbjct: 549 YEDLKPPASPTPSLK 563
>ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223541766|gb|EEF43314.1| NAD dependent
epimerase/dehydratase, putative [Ricinus communis]
Length = 584
Score = 454 bits (1169), Expect = e-125
Identities = 260/471 (55%), Positives = 312/471 (66%), Gaps = 17/471 (3%)
Frame = +2
Query: 20 KDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS-DGASAV 196
KD+NL FVAGATG+VGSRTVRELLKLGF+VRAGVRSAQRA+TLVQSVKQ+ + +GA +
Sbjct: 78 KDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTLVQSVKQMKLDGEGAQPI 137
Query: 197 EKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDAATV 373
EK EI+ECDL++ + I A+ NAS+V+CCIGA EKEVFD TGPYRIDYQAT+NLIDAATV
Sbjct: 138 EKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFDFTGPYRIDYQATRNLIDAATV 197
Query: 374 AGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGMERPT 553
A V HFI+++SLGTNK+GFPAAILNLFWGVL WKRKAEEALIASG+PYTIVRPGGMERPT
Sbjct: 198 AKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEEALIASGIPYTIVRPGGMERPT 257
Query: 554 DAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLSPFG 733
DAYKETHN++LS+EDTLFGGQVSNLQVAELMA M KN DLSYCKVVEVIAETTAPL+
Sbjct: 258 DAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLDLSYCKVVEVIAETTAPLTTMD 317
Query: 734 ELLSKIPSQWVDRSS---------VKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXXXXYS 886
+LL++IPSQ + + + E +P S+ ++ Y+
Sbjct: 318 KLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTSAIEKEPEQPKATVSRPLSPYT 377
Query: 887 VYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTT---EARSSTVKLH 1057
YDDLK N V AV++P +Q S L + E++ +TV+
Sbjct: 378 AYDDLK-PPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQTSSSGLASAIPESKPATVEAK 436
Query: 1058 DTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVLA 1237
PLSPY Y DLK S + A T + S+ N A
Sbjct: 437 IAGPLSPYAAYPDLKPPTSPSPKPSGSKE-IPSGASSTEKVESSATGDNDVATITANNDA 495
Query: 1238 EVPTPK-TSYLSPYPVYDDLKPPTSPSPYAP--KVSPLSTSTTEAGSLSSP 1381
E P P+ +S SP+ VYDDLKPPTSPSP AP V P ST+ S+P
Sbjct: 496 ENPPPEFSSGHSPFLVYDDLKPPTSPSPIAPVGSVPPSSTNEVPKAGNSAP 546
>ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1|
predicted protein [Populus trichocarpa]
Length = 517
Score = 450 bits (1157), Expect = e-124
Identities = 256/453 (56%), Positives = 308/453 (67%), Gaps = 14/453 (3%)
Frame = +2
Query: 2 NQDIGSKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNIS- 178
++++ +KDENL FVAGATGKVGSR VRELLKLGFRVRAGVRSAQ+AE LVQSV + +
Sbjct: 72 SKEVETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEALVQSVMAMKLDV 131
Query: 179 DGASAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNL 355
+G+ VE+L+IVECDLE+ ++I PA+ NASV++CCIGA EKEVFDVTGPYRIDY ATKNL
Sbjct: 132 EGSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFDVTGPYRIDYLATKNL 191
Query: 356 IDAATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPG 535
+DAAT V+HFI+++SLGTNK+GFPAAILNLFWGVLIWKRKAEEALIASG+PYTIVRPG
Sbjct: 192 VDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEEALIASGVPYTIVRPG 251
Query: 536 GMERPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTA 715
GMERPTDAYKETHN++LS+EDTLFGG VSNLQVAELMAFM NR LSYCKVVEVIAETTA
Sbjct: 252 GMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRRLSYCKVVEVIAETTA 311
Query: 716 PLSPFGELLSKIPSQWVDRSSVKDSSIKE-------EEVKPVSSFAEDXXXXXXXXXXXX 874
PL+P ELL+KIPSQ V+ + + + + E P S ++
Sbjct: 312 PLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPSQKEPAQAKAMVTRPL 371
Query: 875 XXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIAASQIDVSALTTEARSSTVKL 1054
Y+ YDDLK ++AVS+PA + + E + V+
Sbjct: 372 SPYTAYDDLKPPTSPTPIQPSSKKES-AGPLEAVSKPATQDTPPMPAPGVAETKPGPVET 430
Query: 1055 HDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPTKVL 1234
TRPLSPY Y DLK +AP G V+ TN AVP TG +
Sbjct: 431 KTTRPLSPYAAYADLKPPTSPSP--TAP-VGSVIPTSSTN-AVPE------TGNRAPPMA 480
Query: 1235 AEV-----PTPKTSYLSPYPVYDDLKPPTSPSP 1318
A + PK LSPYP+Y+DLKPP SP+P
Sbjct: 481 AAIDKQHHTEPKQKPLSPYPMYEDLKPPASPTP 513
>ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]
Length = 528
Score = 445 bits (1144), Expect = e-122
Identities = 258/458 (56%), Positives = 306/458 (66%), Gaps = 24/458 (5%)
Frame = +2
Query: 17 SKDENLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAETLVQSVKQLNI---SDGA 187
SKD+NLVFVAGATG+VGSRTVREL+KLGFRVRAGVRSAQRA LVQSV+QL + S G
Sbjct: 79 SKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGALVQSVEQLKLDGASGGG 138
Query: 188 SAVEKLEIVECDLEQ-DRIEPAIANASVVVCCIGASEKEVFDVTGPYRIDYQATKNLIDA 364
AVEKLEIVECDLE+ + I A+ +AS V+C IGASEKEVFD+TGP+RIDYQATKNLIDA
Sbjct: 139 QAVEKLEIVECDLEKPETIGSALGDASTVICSIGASEKEVFDITGPFRIDYQATKNLIDA 198
Query: 365 ATVAGVDHFILLTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALIASGLPYTIVRPGGME 544
ATVA V+HFIL+TSLGTNKIGFPAAILNLFWGVL+WKRKAEEAL+ASGLPYTIVRPGGME
Sbjct: 199 ATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGLPYTIVRPGGME 258
Query: 545 RPTDAYKETHNVSLSKEDTLFGGQVSNLQVAELMAFMTKNRDLSYCKVVEVIAETTAPLS 724
RPTDA+KETHN++LS EDTLFGG VSNLQ+AEL+A M KNRDLSYCK+VE IAETTAPL+
Sbjct: 259 RPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNRDLSYCKIVEAIAETTAPLT 318
Query: 725 PFGELLSKIPSQW----------VDRSSVKDSSIKEEEVKPVSSFAEDXXXXXXXXXXXX 874
P ELL+KIPSQ + SV D V+P + ++
Sbjct: 319 PMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPL 378
Query: 875 XXYSVYDDLKXXXXXXXXXXXXXXNGHVIVVQAVSEPAIA---ASQIDVSALTTEARSST 1045
Y VYDDLK + + V +P+ + +S V ++ SS
Sbjct: 379 SPYIVYDDLK--PPSSPSPSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSK 436
Query: 1046 VKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPRRGFVVAAQPTNEAVPSSEYSNITGETPT 1225
V+ +PLSPY Y DLK +P V + P VP E I+ P
Sbjct: 437 VE----KPLSPYVAYPDLKPPTS-----PSPNAPTVSVSTPAAAGVP--EIDTISSNGPA 485
Query: 1226 KVLA-------EVPTPKTSYLSPYPVYDDLKPPTSPSP 1318
++ A +P PK+ LSPY +Y+DLKPP SPSP
Sbjct: 486 QLSAADEPKEEHLPEPKSRPLSPYTMYEDLKPPASPSP 523
Score = 64.7 bits (156), Expect(2) = 3e-09
Identities = 53/151 (35%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Frame = +2
Query: 965 VQAVSEPAIAASQIDVSA-LTTEARSSTVKLHDTRPLSPYFVYEDLKXXXXXXXXFSAPR 1141
+ AVS P A+ + V + T+ ++ K +PLSPY VY+DLK S+P
Sbjct: 342 IAAVSVPDPPANVVTVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPP-------SSPS 394
Query: 1142 RGFVVAAQPT--NEAVPSSEYSNITGETP-------TKVLAEVPTPKTSYLSPYPVYDDL 1294
+PT +E VP S+ P T ++V P LSPY Y DL
Sbjct: 395 PSQPGGGKPTKISETVPKPSASDTPSSVPGVDGISQTTSSSKVEKP----LSPYVAYPDL 450
Query: 1295 KPPTSPSPYAPKVS---PLSTSTTEAGSLSS 1378
KPPTSPSP AP VS P + E ++SS
Sbjct: 451 KPPTSPSPNAPTVSVSTPAAAGVPEIDTISS 481
Score = 24.6 bits (52), Expect(2) = 3e-09
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1396 YEDLKRPCSPVPS 1434
YEDLK P SP PS
Sbjct: 512 YEDLKPPASPSPS 524