BLASTX nr result

ID: Coptis25_contig00022317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022317
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262...   204   3e-50
emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]   204   3e-50
ref|XP_002285047.1| PREDICTED: uncharacterized protein LOC100262...   184   2e-44
gb|AFK35557.1| unknown [Medicago truncatula]                          175   1e-41
gb|ACJ85125.1| unknown [Medicago truncatula]                          175   1e-41

>ref|XP_002280261.2| PREDICTED: uncharacterized protein LOC100262292 [Vitis vinifera]
          Length = 308

 Score =  204 bits (518), Expect = 3e-50
 Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 9/199 (4%)
 Frame = +2

Query: 224 GVHNQFPLTPKPTNKSQTSTDPTTFIQADTSSFKQLVQMLTGSSETVKQXXXXXXXXXXX 403
           G+H+  P TPKP  +S+++  PTTF+QADTSSFKQ+VQMLTGSSET KQ           
Sbjct: 109 GLHH--PPTPKPITRSESNPYPTTFVQADTSSFKQVVQMLTGSSETAKQ----ASASKPV 162

Query: 404 XXXKSVIRPIKTGPKKQ-GNKLYERRNSFKNFKVSPLMSGLVQ-NCGFSPRELEMLSPSI 577
              ++ I PIKTG KKQ G KLYERRNS KN K+SPL+ G VQ N GFSPR+ E+LSPS+
Sbjct: 163 SDPRTHIPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPRKPEILSPSM 222

Query: 578 LDFPSLVISPDTPLTQDPFNRSPTTYTTSKLSL-------VDQGRIIEKGFYLHSSPIAS 736
           LDFP+LV+SP TPL  DPFNRSP    +S  S         ++  I EKGF+LH SP  +
Sbjct: 223 LDFPALVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATT 282

Query: 737 PRDSVPRLLPLFPMTSPKV 793
           PRDS PRLL LFP+TSP+V
Sbjct: 283 PRDSEPRLLSLFPVTSPRV 301


>emb|CAN78123.1| hypothetical protein VITISV_041548 [Vitis vinifera]
          Length = 235

 Score =  204 bits (518), Expect = 3e-50
 Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 9/199 (4%)
 Frame = +2

Query: 224 GVHNQFPLTPKPTNKSQTSTDPTTFIQADTSSFKQLVQMLTGSSETVKQXXXXXXXXXXX 403
           G+H+  P TPKP  +S+++  PTTF+QADTSSFKQ+VQMLTGSSET KQ           
Sbjct: 36  GLHH--PPTPKPITRSESNPYPTTFVQADTSSFKQVVQMLTGSSETAKQ----ASASKPV 89

Query: 404 XXXKSVIRPIKTGPKKQ-GNKLYERRNSFKNFKVSPLMSGLVQ-NCGFSPRELEMLSPSI 577
              ++ I PIKTG KKQ G KLYERRNS KN K+SPL+ G VQ N GFSPR+ E+LSPS+
Sbjct: 90  SDPRTHIPPIKTGAKKQPGFKLYERRNSLKNLKLSPLIPGFVQNNSGFSPRKPEILSPSM 149

Query: 578 LDFPSLVISPDTPLTQDPFNRSPTTYTTSKLSL-------VDQGRIIEKGFYLHSSPIAS 736
           LDFP+LV+SP TPL  DPFNRSP    +S  S         ++  I EKGF+LH SP  +
Sbjct: 150 LDFPALVLSPVTPLIPDPFNRSPMNSCSSSASANANLDSEAEEKAIAEKGFFLHPSPATT 209

Query: 737 PRDSVPRLLPLFPMTSPKV 793
           PRDS PRLL LFP+TSP+V
Sbjct: 210 PRDSEPRLLSLFPVTSPRV 228


>ref|XP_002285047.1| PREDICTED: uncharacterized protein LOC100262369 [Vitis vinifera]
          Length = 210

 Score =  184 bits (468), Expect = 2e-44
 Identities = 100/187 (53%), Positives = 129/187 (68%), Gaps = 2/187 (1%)
 Frame = +2

Query: 242 PLTPKPTNKSQTSTDPTTFIQADTSSFKQLVQMLTGSSETVKQXXXXXXXXXXXXXXKSV 421
           PLTPKP ++S ++  PTTF+QAD +SFKQ+VQ LTGSS+  +                  
Sbjct: 41  PLTPKPISRSDSNPYPTTFVQADANSFKQVVQRLTGSSKPTQDPPTKACN---------- 90

Query: 422 IRPIKTGPKKQGNKLYERRNSFKN-FKVSPLMSGLVQN-CGFSPRELEMLSPSILDFPSL 595
           I PI+TG KKQG KLYERR+  KN   ++PL+ G VQN  GFSPR+ E+LSPS+LDFP L
Sbjct: 91  IPPIRTGQKKQGFKLYERRSQLKNGLMINPLVHGYVQNNSGFSPRKPEILSPSLLDFPKL 150

Query: 596 VISPDTPLTQDPFNRSPTTYTTSKLSLVDQGRIIEKGFYLHSSPIASPRDSVPRLLPLFP 775
           V+SP TPLT+DPFN+S            ++  I EKGFYLH SP+++PRDS P+LLPLFP
Sbjct: 151 VLSPVTPLTEDPFNKSS-----------EEKAIAEKGFYLHPSPMSTPRDSEPQLLPLFP 199

Query: 776 MTSPKVA 796
           +TSP+V+
Sbjct: 200 VTSPRVS 206


>gb|AFK35557.1| unknown [Medicago truncatula]
          Length = 249

 Score =  175 bits (444), Expect = 1e-41
 Identities = 98/197 (49%), Positives = 126/197 (63%), Gaps = 12/197 (6%)
 Frame = +2

Query: 242 PLTPKPTNKSQTSTDPTTFIQADTSSFKQLVQMLTGSSETVKQXXXXXXXXXXXXXXKSV 421
           PLTPK   +S ++  PTTF+QADT++FKQ+VQMLTGSSET                 + +
Sbjct: 49  PLTPKTIPRSDSNPYPTTFVQADTTTFKQVVQMLTGSSETTSTTPTTTKPTTKPNQQQDL 108

Query: 422 --------IRPIKTGPKKQGNKLYERRNSFKN--FKVSPLMSGLVQNCGFSPR--ELEML 565
                   I PIKT PKKQG KLYERRNS KN    ++ LM    QN  FSPR  + E+L
Sbjct: 109 PQQTRNFNIPPIKTAPKKQGFKLYERRNSLKNSVLMLNTLMPNFSQNSNFSPRKQQQEIL 168

Query: 566 SPSILDFPSLVISPDTPLTQDPFNRSPTTYTTSKLSLVDQGRIIEKGFYLHSSPIASPRD 745
           SPS+LDFPSL +SP TPL  DPF++S  +   S     +   I E+G+YLH SPI +PRD
Sbjct: 169 SPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSS---EEDKAIAERGYYLHPSPITTPRD 225

Query: 746 SVPRLLPLFPMTSPKVA 796
           + P+LLPLFP++SP+V+
Sbjct: 226 AEPQLLPLFPLSSPRVS 242


>gb|ACJ85125.1| unknown [Medicago truncatula]
          Length = 246

 Score =  175 bits (444), Expect = 1e-41
 Identities = 98/197 (49%), Positives = 126/197 (63%), Gaps = 12/197 (6%)
 Frame = +2

Query: 242 PLTPKPTNKSQTSTDPTTFIQADTSSFKQLVQMLTGSSETVKQXXXXXXXXXXXXXXKSV 421
           PLTPK   +S ++  PTTF+QADT++FKQ+VQMLTGSSET                 + +
Sbjct: 49  PLTPKTIPRSDSNPYPTTFVQADTTTFKQVVQMLTGSSETTSTTPTTTKPTTKPNQQQDL 108

Query: 422 --------IRPIKTGPKKQGNKLYERRNSFKN--FKVSPLMSGLVQNCGFSPR--ELEML 565
                   I PIKT PKKQG KLYERRNS KN    ++ LM    QN  FSPR  + E+L
Sbjct: 109 PQQTRNFNIPPIKTAPKKQGFKLYERRNSLKNSVLMLNTLMPNFSQNSNFSPRKQQQEIL 168

Query: 566 SPSILDFPSLVISPDTPLTQDPFNRSPTTYTTSKLSLVDQGRIIEKGFYLHSSPIASPRD 745
           SPS+LDFPSL +SP TPL  DPF++S  +   S     +   I E+G+YLH SPI +PRD
Sbjct: 169 SPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSS---EEDKAIAERGYYLHPSPITTPRD 225

Query: 746 SVPRLLPLFPMTSPKVA 796
           + P+LLPLFP++SP+V+
Sbjct: 226 AEPQLLPLFPLSSPRVS 242


Top