BLASTX nr result

ID: Coptis25_contig00022301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022301
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis v...   482   e-134
gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasili...   481   e-133
ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase...   477   e-132
ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatul...   475   e-131
dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]       468   e-129

>ref|XP_002275808.1| PREDICTED: phosphomevalonate kinase [Vitis vinifera]
            gi|297742018|emb|CBI33805.3| unnamed protein product
            [Vitis vinifera]
          Length = 508

 Score =  482 bits (1241), Expect = e-134
 Identities = 255/426 (59%), Positives = 296/426 (69%)
 Frame = +2

Query: 134  IIGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTS 313
            ++ SAPGKVLMTGGYLILER NAG+VLSTNARFYAIVKP+   ++PDSWAW WTDVKLTS
Sbjct: 3    VVASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPLREDIEPDSWAWAWTDVKLTS 62

Query: 314  PQLSRETVYKLSLKNLTLECISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 493
            PQLSRET+YK+SLKNL L+C+SS E  NPFVE                            
Sbjct: 63   PQLSRETMYKMSLKNLMLQCVSSSESRNPFVEQAVQYTIAAARATLDKNNNDFLHTKLLQ 122

Query: 494  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKT 673
                 TILG NDFYSYRN IEA GLPLT + LA+LP F+ ITFNAE S G NCKPEVAKT
Sbjct: 123  GLDI-TILGCNDFYSYRNYIEARGLPLTPDVLAALPPFTPITFNAEESNGENCKPEVAKT 181

Query: 674  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 853
            GLG               Y GVVNLS   +  +QEKD  +LDLVHV+AQSAHCIAQGK+G
Sbjct: 182  GLGSSAAMTTSVVAALLHYFGVVNLSSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVG 241

Query: 854  SGFDVSAAVYGSQRYVRFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1033
            SGFDVS+AVYGSQRYVRFSP +LSSAQVA+K   +QEVI D+LK  WDHE+TKF      
Sbjct: 242  SGFDVSSAVYGSQRYVRFSPEVLSSAQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLM 301

Query: 1034 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQ 1213
                            MVGAVKKWQ S+P+KS+E  + LS ANSALETQ K+L K AEE 
Sbjct: 302  TLLLGEPGAGGSSTPSMVGAVKKWQKSDPEKSLETWRKLSAANSALETQFKILSKLAEEN 361

Query: 1214 WESYEHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1393
            W++Y+ VI SCS  R E+W E+AT   +EA+V ALL ARDA+ +IR +MR MG+ AG+PI
Sbjct: 362  WDAYKCVINSCSIHRSEKWMERATGPDQEAVVNALLAARDAMLRIRSNMRQMGEAAGIPI 421

Query: 1394 EPESQT 1411
            EP SQT
Sbjct: 422  EPNSQT 427


>gb|AAL18926.1|AF429385_1 phosphomevalonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  481 bits (1238), Expect = e-133
 Identities = 256/426 (60%), Positives = 301/426 (70%)
 Frame = +2

Query: 134  IIGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTS 313
            ++ SAPGKVLMTGGYLILER NAG+VLSTNARFYAIVKPIY+ +KPDSWAW WTDVKLTS
Sbjct: 3    VVASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPIYDEIKPDSWAWAWTDVKLTS 62

Query: 314  PQLSRETVYKLSLKNLTLECISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 493
            PQL+RE++YKLSLKNL L+C+SS    NPFVE          H                 
Sbjct: 63   PQLARESLYKLSLKNLALQCVSSSASRNPFVEQAVQFAVAAAHA-TLDKDKKNVLNKLLL 121

Query: 494  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKT 673
                 TILG+NDFYSYRN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKT
Sbjct: 122  QGLDITILGTNDFYSYRNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKT 181

Query: 674  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 853
            GLG               +LG+V+LS S     +EK  ++LDLVH++AQ+AHCIAQGK+G
Sbjct: 182  GLGSSAAMTTAVVAALLHHLGLVDLSSSC----KEKKFSDLDLVHIIAQTAHCIAQGKVG 237

Query: 854  SGFDVSAAVYGSQRYVRFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1033
            SGFDVS+AVYGS RYVRFSP +LSSAQ A K   LQEVIS++LK KWDHE+T F      
Sbjct: 238  SGFDVSSAVYGSHRYVRFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLM 297

Query: 1034 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQ 1213
                            MVGA+KKWQ S+ QKS E  + LSEANSALETQ  +L K AEE 
Sbjct: 298  SLLLGEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEH 357

Query: 1214 WESYEHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1393
            W++Y+ VI SCS    E+W EQAT+  REA+VKALLG+R+A+ QIR +MR MG+ AGVPI
Sbjct: 358  WDAYKCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPI 417

Query: 1394 EPESQT 1411
            EPESQT
Sbjct: 418  EPESQT 423


>ref|XP_004136210.1| PREDICTED: probable phosphomevalonate kinase-like [Cucumis sativus]
            gi|449508038|ref|XP_004163199.1| PREDICTED: probable
            phosphomevalonate kinase-like [Cucumis sativus]
          Length = 507

 Score =  477 bits (1228), Expect = e-132
 Identities = 249/426 (58%), Positives = 293/426 (68%)
 Frame = +2

Query: 134  IIGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTS 313
            ++ SAPGKVLMTGGYL+LE+ NAGLVLSTNARFYAIVKPIY  +KPDSWAW WTD+KLTS
Sbjct: 3    VVASAPGKVLMTGGYLVLEKPNAGLVLSTNARFYAIVKPIYEEIKPDSWAWSWTDIKLTS 62

Query: 314  PQLSRETVYKLSLKNLTLECISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 493
            PQL RE++YKLSLKN +LE +S  +  NPFVE                            
Sbjct: 63   PQLLRESIYKLSLKNQSLESVSPSQSRNPFVERAVEYCVAAASAKFVDKDNKNALHKLLL 122

Query: 494  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKT 673
                 TILG N+FYSYR+QIEA GLPLT+ESLASLP FSSITFN E S G NCKPEVAKT
Sbjct: 123  QGLDITILGCNEFYSYRSQIEARGLPLTSESLASLPPFSSITFNDEESLGKNCKPEVAKT 182

Query: 674  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 853
            GLG               YLGVVNLS  T    +++  A LDLVH++AQSAHCIAQGK+G
Sbjct: 183  GLGSSAAMTAAVVAALLNYLGVVNLSLLTGD-QEQRGSAGLDLVHIIAQSAHCIAQGKVG 241

Query: 854  SGFDVSAAVYGSQRYVRFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1033
            SGFDVS+AVYGSQRYVRFSP +LSSAQ A     ++EVI D+L  KWDHE+TKF      
Sbjct: 242  SGFDVSSAVYGSQRYVRFSPEVLSSAQAAKNGIPIEEVIVDILNQKWDHERTKFSLPPLM 301

Query: 1034 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQ 1213
                            MVGAVKKWQ S+PQKS++  + LSE NS LETQL  L K A E 
Sbjct: 302  TLVLGEPGVGGSSTPSMVGAVKKWQKSDPQKSLDTWRKLSEGNSELETQLNTLHKLAAEH 361

Query: 1214 WESYEHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1393
            W++Y+++I SC  L  E+W  QAT+  ++AI+KALLGAR+A+ QIR HMR MG+ AGVPI
Sbjct: 362  WDAYKYIINSCCKLTSEKWIHQATEPSQQAIIKALLGARNAMLQIRHHMRSMGEAAGVPI 421

Query: 1394 EPESQT 1411
            EP+SQT
Sbjct: 422  EPDSQT 427


>ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatula]
            gi|355491268|gb|AES72471.1| Phosphomevalonate kinase
            [Medicago truncatula]
          Length = 508

 Score =  475 bits (1223), Expect = e-131
 Identities = 247/427 (57%), Positives = 302/427 (70%)
 Frame = +2

Query: 131  IIIGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLT 310
            +++ SAPGKVLMTGGYL+LER NAGLVLSTNARFYAIVKPIY   KPDSWAW W+DV+LT
Sbjct: 3    VVVASAPGKVLMTGGYLVLERPNAGLVLSTNARFYAIVKPIYPQTKPDSWAWAWSDVRLT 62

Query: 311  SPQLSRETVYKLSLKNLTLECISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXX 490
            SPQLSRE  YKL+LKNLT++ +SS E  NPFVE          +                
Sbjct: 63   SPQLSREAFYKLALKNLTIQTVSSSETRNPFVEYAVQYSVAAAYATADQNKKDLLHKLLL 122

Query: 491  XXXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAK 670
                  TILGSNDFYSYRN+IE  GLPLT+ESLA+LP F+SI+FN + + G NCKPEVAK
Sbjct: 123  QGLDI-TILGSNDFYSYRNEIERHGLPLTSESLATLPPFASISFNTDDANGGNCKPEVAK 181

Query: 671  TGLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKI 850
            TGLG               YLGVV +S S++   + KD A+LD+VH +AQ+AHCIAQGK+
Sbjct: 182  TGLGSSAAMTTAVVAALLHYLGVVKIS-SSKDRQERKDIADLDMVHKIAQTAHCIAQGKV 240

Query: 851  GSGFDVSAAVYGSQRYVRFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXX 1030
            GSGFDVS+AVYGS RYVRFSP ++SS QVA     L EVISD+LK  WDH++T+F     
Sbjct: 241  GSGFDVSSAVYGSHRYVRFSPEVISSTQVAATVVPLPEVISDILKGNWDHDRTEFSLPPL 300

Query: 1031 XXXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEE 1210
                             MVG+VKKWQ S+PQKS+E  + LSEANSALE QL LL K A+E
Sbjct: 301  MTLVLGEPGTGGSSTPSMVGSVKKWQKSDPQKSLETWRRLSEANSALEIQLNLLRKLAKE 360

Query: 1211 QWESYEHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVP 1390
            QW++Y+ VI +CS LR ++W EQA+D  +EA++KALLG+++A+  IR+HMRLMG+ AGVP
Sbjct: 361  QWDAYKSVIDNCSILRSDKWIEQASDSNKEAVIKALLGSKEAMVGIRYHMRLMGEAAGVP 420

Query: 1391 IEPESQT 1411
            IEPESQT
Sbjct: 421  IEPESQT 427


>dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  468 bits (1203), Expect = e-129
 Identities = 250/426 (58%), Positives = 298/426 (69%)
 Frame = +2

Query: 134  IIGSAPGKVLMTGGYLILERGNAGLVLSTNARFYAIVKPIYNHLKPDSWAWGWTDVKLTS 313
            ++ SAPGK +MTGGYLILER NAG+VLSTNARFYAIVKP+Y+ +KPDSWAW WTDVKLTS
Sbjct: 3    VVASAPGKGVMTGGYLILERPNAGIVLSTNARFYAIVKPMYDEIKPDSWAWAWTDVKLTS 62

Query: 314  PQLSRETVYKLSLKNLTLECISSRELGNPFVEXXXXXXXXXXHVXXXXXXXXXXXXXXXX 493
            PQL+RE++YKLSLKNL L+C+SS    NPFVE          H                 
Sbjct: 63   PQLARESLYKLSLKNLALQCVSSSASRNPFVEQAVQFAVAAAHA-TLDKDKNNVLNKLLL 121

Query: 494  XXXXXTILGSNDFYSYRNQIEALGLPLTAESLASLPAFSSITFNAEASTGNNCKPEVAKT 673
                 TILG++D YS RN+IEA GLPLT ESLA+LP+FSSITFN E + G NCKPEVAKT
Sbjct: 122  QGLDITILGTSDCYSCRNEIEACGLPLTPESLAALPSFSSITFNVEEANGQNCKPEVAKT 181

Query: 674  GLGXXXXXXXXXXXXXXQYLGVVNLSFSTETLNQEKDDANLDLVHVVAQSAHCIAQGKIG 853
            GLG               +LG+V+LS S     +EK  ++LDLVH++AQ+AHCIAQGK+G
Sbjct: 182  GLGSSAAMTTAVVAALLHHLGLVDLSSSC----KEKKFSDLDLVHIIAQTAHCIAQGKVG 237

Query: 854  SGFDVSAAVYGSQRYVRFSPGLLSSAQVAMKAQSLQEVISDVLKTKWDHEKTKFCXXXXX 1033
            SGFDVS+AVYGS RYVRFSP +LSSAQ A K   LQEVIS++LK KWDHE+T F      
Sbjct: 238  SGFDVSSAVYGSHRYVRFSPEVLSSAQDAGKGIPLQEVISNILKGKWDHERTMFSLPPLM 297

Query: 1034 XXXXXXXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQ 1213
                            MVGA+KKWQ S+ QKS E  + LSEANSALETQ  +L K AEE 
Sbjct: 298  SLLLGEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEH 357

Query: 1214 WESYEHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPI 1393
            W++Y+ VI SCS    E+W EQAT+  REA+VKALLG+R+A+ QIR +MR MG+ AGVPI
Sbjct: 358  WDAYKCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPI 417

Query: 1394 EPESQT 1411
            EPESQT
Sbjct: 418  EPESQT 423


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