BLASTX nr result

ID: Coptis25_contig00022299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022299
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283145.1| PREDICTED: expansin-A20 [Vitis vinifera] gi|...   395   e-108
ref|XP_004144957.1| PREDICTED: expansin-A16-like [Cucumis sativu...   392   e-107
ref|XP_002328142.1| hypothetical protein POPTRDRAFT_827261 [Popu...   389   e-106
gb|AFK38509.1| unknown [Medicago truncatula]                          387   e-105
ref|XP_002313572.1| hypothetical protein POPTRDRAFT_820963 [Popu...   387   e-105

>ref|XP_002283145.1| PREDICTED: expansin-A20 [Vitis vinifera]
           gi|297744459|emb|CBI37721.3| unnamed protein product
           [Vitis vinifera]
          Length = 250

 Score =  395 bits (1015), Expect = e-108
 Identities = 177/230 (76%), Positives = 203/230 (88%)
 Frame = -2

Query: 913 AKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGCFE 734
           A+ ++W+SATATY+KETD S+ITEGACGYGDLHKTSYGK S GLS++LF+RG  CGGCFE
Sbjct: 21  AQVEQWKSATATYSKETDASIITEGACGYGDLHKTSYGKYSAGLSTMLFNRGSTCGGCFE 80

Query: 733 IRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGEIAQRK 554
           +RCV+HILWCLQGSPS+++TATDFCPPN+GL  DYGGWCNFP+EHFEMSE AF EIA   
Sbjct: 81  LRCVDHILWCLQGSPSVILTATDFCPPNFGLPTDYGGWCNFPQEHFEMSEAAFAEIAGLH 140

Query: 553 ADIVPVQYRRVNCLRSGGLRFTIRGTSYFYQVLITNVALDGEVAAVKVKGSKTGWIPMGR 374
           ADIVPVQYRRV C R+GG+RFT+ G S++YQVLITNV LDGEV AVKVKGS+TGWIPM R
Sbjct: 141 ADIVPVQYRRVKCHRNGGMRFTVSGNSHYYQVLITNVGLDGEVVAVKVKGSRTGWIPMAR 200

Query: 373 NWGQFWQCNTNLRGQPLSFEVTSSSRITVTSYNVAPKHWQFGQTFEGKQF 224
           NWGQ WQCN NL GQPLSFEVT+SS  T+TSYNVA  +W+FGQTFEGKQF
Sbjct: 201 NWGQIWQCNINLEGQPLSFEVTTSSGKTLTSYNVASGNWRFGQTFEGKQF 250


>ref|XP_004144957.1| PREDICTED: expansin-A16-like [Cucumis sativus]
           gi|449473011|ref|XP_004153758.1| PREDICTED:
           expansin-A16-like [Cucumis sativus]
           gi|449517152|ref|XP_004165610.1| PREDICTED:
           expansin-A16-like [Cucumis sativus]
          Length = 252

 Score =  392 bits (1006), Expect = e-107
 Identities = 175/232 (75%), Positives = 204/232 (87%)
 Frame = -2

Query: 919 F*AKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGC 740
           F AK +EW SATATY+KETDGS++TEGACGYGDLHK SYGK S GLSS+LF+RG  CG C
Sbjct: 21  FAAKDEEWISATATYSKETDGSIVTEGACGYGDLHKISYGKYSAGLSSMLFNRGSTCGAC 80

Query: 739 FEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGEIAQ 560
           +E+RCV+HILWCLQGSP++++TATDFCPPNYGL++DYGGWCNFP+EHFEMSE AF EIA+
Sbjct: 81  YELRCVDHILWCLQGSPTVILTATDFCPPNYGLSSDYGGWCNFPKEHFEMSEAAFAEIAE 140

Query: 559 RKADIVPVQYRRVNCLRSGGLRFTIRGTSYFYQVLITNVALDGEVAAVKVKGSKTGWIPM 380
           +KADIVPVQYRRV C RSGG+RFT+ G   F+QVLITNV +DGE+ AVKVKGS+TGWIP+
Sbjct: 141 KKADIVPVQYRRVRCDRSGGMRFTVSGNYRFFQVLITNVGMDGELVAVKVKGSRTGWIPL 200

Query: 379 GRNWGQFWQCNTNLRGQPLSFEVTSSSRITVTSYNVAPKHWQFGQTFEGKQF 224
            RNWGQ WQ N NL GQPLSFEVTSSS   +TSY+VAP +WQ+GQTFEGKQF
Sbjct: 201 ARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYSVAPGNWQYGQTFEGKQF 252


>ref|XP_002328142.1| hypothetical protein POPTRDRAFT_827261 [Populus trichocarpa]
           gi|222837657|gb|EEE76022.1| hypothetical protein
           POPTRDRAFT_827261 [Populus trichocarpa]
          Length = 250

 Score =  389 bits (1000), Expect = e-106
 Identities = 178/247 (72%), Positives = 205/247 (82%)
 Frame = -2

Query: 964 NQTWECNVFPPYASYF*AKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVG 785
           +QTW+            A  +EW+SATATY KET+GS++ EGACGY DLHK +YGK S G
Sbjct: 14  HQTWKIT----------ADDEEWKSATATYVKETNGSIVVEGACGYADLHKATYGKYSAG 63

Query: 784 LSSLLFDRGRICGGCFEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPR 605
           LSS+LF+RG  CG CFE+RCV+HILWCLQGSPS+++TATDFCPPNYGL+ DYGGWCNFP+
Sbjct: 64  LSSMLFNRGSTCGACFEVRCVDHILWCLQGSPSVILTATDFCPPNYGLSADYGGWCNFPK 123

Query: 604 EHFEMSEVAFGEIAQRKADIVPVQYRRVNCLRSGGLRFTIRGTSYFYQVLITNVALDGEV 425
           EHF+MSE AF EIA++KADIVPVQ+RRV C R GGLRFT+ G  +FYQVLI+NV LDGEV
Sbjct: 124 EHFDMSEAAFTEIAEKKADIVPVQHRRVKCERRGGLRFTVSGNFHFYQVLISNVGLDGEV 183

Query: 424 AAVKVKGSKTGWIPMGRNWGQFWQCNTNLRGQPLSFEVTSSSRITVTSYNVAPKHWQFGQ 245
            AVKVKGSKT WIPM RNWGQ WQ N NL GQPLSFEVT+SSR T+TSYNVAP +WQFGQ
Sbjct: 184 IAVKVKGSKTAWIPMARNWGQNWQSNVNLIGQPLSFEVTTSSRKTLTSYNVAPANWQFGQ 243

Query: 244 TFEGKQF 224
           TFEGKQF
Sbjct: 244 TFEGKQF 250


>gb|AFK38509.1| unknown [Medicago truncatula]
          Length = 256

 Score =  387 bits (995), Expect = e-105
 Identities = 173/229 (75%), Positives = 201/229 (87%)
 Frame = -2

Query: 910 KGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVGLSSLLFDRGRICGGCFEI 731
           K  EW+ ATATY K+T+GSLITEGACGYGDLHK SYGK SVGLS++LF+RG  CG C+EI
Sbjct: 28  KDQEWKKATATYAKDTEGSLITEGACGYGDLHKASYGKHSVGLSTILFNRGSTCGACYEI 87

Query: 730 RCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPREHFEMSEVAFGEIAQRKA 551
           RCV+HILWC+ GSPS++VTATDFCPPN+GL+ DYGGWCNFPREHFE+S+ AF EIA+ KA
Sbjct: 88  RCVDHILWCMLGSPSVIVTATDFCPPNFGLSVDYGGWCNFPREHFELSQAAFAEIAKGKA 147

Query: 550 DIVPVQYRRVNCLRSGGLRFTIRGTSYFYQVLITNVALDGEVAAVKVKGSKTGWIPMGRN 371
           DI+P+QYRRV C RSGGL+FT+ G+S+FYQVLITNV LDGEV AVKVKGS+TGWIPM RN
Sbjct: 148 DIIPIQYRRVKCERSGGLKFTMSGSSHFYQVLITNVGLDGEVFAVKVKGSRTGWIPMARN 207

Query: 370 WGQFWQCNTNLRGQPLSFEVTSSSRITVTSYNVAPKHWQFGQTFEGKQF 224
           WG  W CN NL+ QPLSFEVTSS+  T+TSYNVAP +WQFGQTF+GKQF
Sbjct: 208 WGMNWHCNVNLQHQPLSFEVTSSTGKTLTSYNVAPPNWQFGQTFQGKQF 256


>ref|XP_002313572.1| hypothetical protein POPTRDRAFT_820963 [Populus trichocarpa]
           gi|118483271|gb|ABK93538.1| unknown [Populus
           trichocarpa] gi|222849980|gb|EEE87527.1| hypothetical
           protein POPTRDRAFT_820963 [Populus trichocarpa]
          Length = 250

 Score =  387 bits (994), Expect = e-105
 Identities = 176/247 (71%), Positives = 205/247 (82%)
 Frame = -2

Query: 964 NQTWECNVFPPYASYF*AKGDEWRSATATYTKETDGSLITEGACGYGDLHKTSYGKLSVG 785
           +QTW+            A  +EW+SATATY KET GS+I EGACGYGDLH+ +YGK S G
Sbjct: 14  HQTWKIT----------ADDEEWKSATATYVKETSGSIIVEGACGYGDLHRATYGKYSAG 63

Query: 784 LSSLLFDRGRICGGCFEIRCVNHILWCLQGSPSIVVTATDFCPPNYGLANDYGGWCNFPR 605
           LSS+LF+RG  CG CFE+RCV+HILWCLQGSPS+++TATDFCPPNYGL++DYGGWCNFP+
Sbjct: 64  LSSMLFNRGSTCGACFEVRCVDHILWCLQGSPSVILTATDFCPPNYGLSSDYGGWCNFPK 123

Query: 604 EHFEMSEVAFGEIAQRKADIVPVQYRRVNCLRSGGLRFTIRGTSYFYQVLITNVALDGEV 425
           EHF+MSE AF EIA++KAD+VPVQ+RRV C R GGLRFT+ G  +FYQVLI+NV LDGEV
Sbjct: 124 EHFDMSEAAFAEIAEKKADVVPVQHRRVKCDRRGGLRFTMSGNFHFYQVLISNVGLDGEV 183

Query: 424 AAVKVKGSKTGWIPMGRNWGQFWQCNTNLRGQPLSFEVTSSSRITVTSYNVAPKHWQFGQ 245
            AVKVKGS+T WIPM RNWGQ WQ N NL GQPLSFEVT+SSR T+TSYNVAP +WQFGQ
Sbjct: 184 IAVKVKGSRTAWIPMARNWGQNWQSNINLIGQPLSFEVTTSSRRTLTSYNVAPANWQFGQ 243

Query: 244 TFEGKQF 224
            FEGKQF
Sbjct: 244 IFEGKQF 250


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