BLASTX nr result

ID: Coptis25_contig00022289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022289
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309921.1| white-brown-complex ABC transporter family [...   283   2e-74
ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5...   280   1e-73
ref|XP_002306254.1| white-brown-complex ABC transporter family [...   278   4e-73
ref|XP_002516304.1| ATP-binding cassette transporter, putative [...   268   5e-70
emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catha...   264   6e-69

>ref|XP_002309921.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222852824|gb|EEE90371.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 546

 Score =  283 bits (723), Expect = 2e-74
 Identities = 143/180 (79%), Positives = 151/180 (83%)
 Frame = -2

Query: 541 TIQMLIVGLVLGSIFYDLKDDLIGSAERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362
           TIQMLI GLVLGSIFY+LKDDL G+ ERVGLFAFILTFLLSCTTEALPIFLQEREILMKE
Sbjct: 303 TIQMLISGLVLGSIFYNLKDDLTGAEERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362

Query: 361 TSSGSYRISSYVIANGXXXXXXXXXXXXXXXXXXXXXVGLNPNFMAFMFFVLLIWLIFYT 182
           TS GSYR+SSY IANG                     VGLNPNFMAFM F+LLIWLI YT
Sbjct: 363 TSCGSYRVSSYAIANGLVYLPFLLILAILFTIPLYWLVGLNPNFMAFMHFLLLIWLILYT 422

Query: 181 ANSVVVCFSALVPNFIIGNSLISGVMGSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFE 2
           ANSVVVCFSALVPNFI+GNS+ISGVMGSFFLFSGYFISK+GMP YW+FMHYISLFKYPFE
Sbjct: 423 ANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGMPNYWIFMHYISLFKYPFE 482


>ref|XP_002274622.1| PREDICTED: ABC transporter G family member 5 isoform 1 [Vitis
           vinifera]
          Length = 635

 Score =  280 bits (716), Expect = 1e-73
 Identities = 141/180 (78%), Positives = 150/180 (83%)
 Frame = -2

Query: 541 TIQMLIVGLVLGSIFYDLKDDLIGSAERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362
           T+QMLI GLVLGSIFY LKD+LIG+ ERVGLFAFILTFLLSCTTEALPIFLQER+ILMKE
Sbjct: 381 TLQMLIAGLVLGSIFYQLKDNLIGAEERVGLFAFILTFLLSCTTEALPIFLQERDILMKE 440

Query: 361 TSSGSYRISSYVIANGXXXXXXXXXXXXXXXXXXXXXVGLNPNFMAFMFFVLLIWLIFYT 182
           TSSGSYR+SSY IANG                     VGLNPNFMAFM F+ LIWLI YT
Sbjct: 441 TSSGSYRVSSYAIANGLVYLPFLLILAILFSLPLYLLVGLNPNFMAFMHFLFLIWLILYT 500

Query: 181 ANSVVVCFSALVPNFIIGNSLISGVMGSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFE 2
           ANSVVVCFSALVPNFI+G S+ISGVMGSFFLFSGYFISKNGMP YW+FMHYISLFKYPFE
Sbjct: 501 ANSVVVCFSALVPNFIVGYSVISGVMGSFFLFSGYFISKNGMPDYWIFMHYISLFKYPFE 560


>ref|XP_002306254.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855703|gb|EEE93250.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 643

 Score =  278 bits (711), Expect = 4e-73
 Identities = 140/180 (77%), Positives = 151/180 (83%)
 Frame = -2

Query: 541 TIQMLIVGLVLGSIFYDLKDDLIGSAERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362
           TIQMLI GLVLGSIFY+L+DDLIG+ ERVGLFAFILTFLLSCTTEALPIFLQEREILMKE
Sbjct: 387 TIQMLISGLVLGSIFYNLEDDLIGAEERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 446

Query: 361 TSSGSYRISSYVIANGXXXXXXXXXXXXXXXXXXXXXVGLNPNFMAFMFFVLLIWLIFYT 182
           TS GSYR+SSY IANG                     VGLNPNF+AFM F+LLIWLI YT
Sbjct: 447 TSCGSYRVSSYAIANGLVYLPFLLILAILFTIPLYWLVGLNPNFIAFMHFLLLIWLILYT 506

Query: 181 ANSVVVCFSALVPNFIIGNSLISGVMGSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFE 2
           ANSVVVCFSALVPNFI+GNS+ISGVMGSFFLFSGYF SK+G+P YW+FMHYISLFKYPFE
Sbjct: 507 ANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFTSKHGIPNYWIFMHYISLFKYPFE 566


>ref|XP_002516304.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223544534|gb|EEF46051.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 600

 Score =  268 bits (684), Expect = 5e-70
 Identities = 134/180 (74%), Positives = 148/180 (82%)
 Frame = -2

Query: 541 TIQMLIVGLVLGSIFYDLKDDLIGSAERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362
           TIQMLI G+VLGSIF ++KDD+ G+ ERVGLFAFILTFLLSCTTEALPIFLQEREILMKE
Sbjct: 377 TIQMLICGIVLGSIFCNVKDDIAGAEERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 436

Query: 361 TSSGSYRISSYVIANGXXXXXXXXXXXXXXXXXXXXXVGLNPNFMAFMFFVLLIWLIFYT 182
           TS GSYR+SSY IANG                     VGLNP+  AFM F+LLIW+I YT
Sbjct: 437 TSCGSYRVSSYAIANGLVYLPFLLILAILFSVPLYWLVGLNPSVSAFMHFLLLIWMILYT 496

Query: 181 ANSVVVCFSALVPNFIIGNSLISGVMGSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFE 2
           ANSVVVCFSALVPNFI+GNS+ISGVMGSFFLFSGYFISK+G+P YW+FMHYISLFKYPFE
Sbjct: 497 ANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHGIPNYWIFMHYISLFKYPFE 556


>emb|CAO94661.1| ATP Binding Cassette Transporter (CrWBC1) [Catharanthus roseus]
          Length = 626

 Score =  264 bits (675), Expect = 6e-69
 Identities = 135/180 (75%), Positives = 146/180 (81%)
 Frame = -2

Query: 541 TIQMLIVGLVLGSIFYDLKDDLIGSAERVGLFAFILTFLLSCTTEALPIFLQEREILMKE 362
           T+QMLI GLVLGSIFY LK +L+G+ ERVGLFAFILTFLLS TTEALPIFLQEREILMKE
Sbjct: 372 TLQMLISGLVLGSIFYGLKYNLVGAEERVGLFAFILTFLLSSTTEALPIFLQEREILMKE 431

Query: 361 TSSGSYRISSYVIANGXXXXXXXXXXXXXXXXXXXXXVGLNPNFMAFMFFVLLIWLIFYT 182
           TS GSYR+SSY IANG                      GLN NF AFM F++LIWLI YT
Sbjct: 432 TSCGSYRVSSYAIANGLVYLPFLLILALLFSTPLYWLAGLNRNFFAFMQFLVLIWLILYT 491

Query: 181 ANSVVVCFSALVPNFIIGNSLISGVMGSFFLFSGYFISKNGMPKYWVFMHYISLFKYPFE 2
           ANSVVVCFSALVPNFI+GNSLISGVMGSFFLFSGYFISK+G+P YW+FMHYISLFKYPFE
Sbjct: 492 ANSVVVCFSALVPNFIVGNSLISGVMGSFFLFSGYFISKHGIPGYWMFMHYISLFKYPFE 551


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