BLASTX nr result

ID: Coptis25_contig00022288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022288
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002526190.1| ATP binding protein, putative [Ricinus commu...    81   8e-14
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...    74   2e-11
emb|CBI22564.3| unnamed protein product [Vitis vinifera]               74   2e-11

>ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|222848215|gb|EEE85762.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/95 (43%), Positives = 58/95 (61%)
 Frame = -1

Query: 309  VDVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPM 130
            VD++ + S  IQVL  WDILPSS+IPKLA  LD +F  YT E+ N C +KC+EG L +PM
Sbjct: 914  VDILQENSFCIQVLKVWDILPSSDIPKLAPSLDTLFRNYTEEQMNRCLYKCMEGNLVVPM 973

Query: 129  SWDIIPDAVKLDNIHNIERDQLSTEFASLRMKEDP 25
             W +   +    +  + +  QL    ASL + ++P
Sbjct: 974  RWTVDSSSDHQGSCGDADAVQLPKSLASLCLDDEP 1008


>ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1|
            predicted protein [Populus trichocarpa]
          Length = 1087

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/103 (39%), Positives = 62/103 (60%)
 Frame = -1

Query: 309  VDVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPM 130
            VD++ + S  I VL  WDILPSS+IPKLA  LD +F  YT E+ N C +KC+EG L +PM
Sbjct: 961  VDILQENSFWIHVLKVWDILPSSDIPKLAMSLDTLFWNYTEEQMNRCLYKCMEGNLVVPM 1020

Query: 129  SWDIIPDAVKLDNIHNIERDQLSTEFASLRMKEDPRRPARGSR 1
             W +   + +  +  + +  QL    ASL ++++P    + +R
Sbjct: 1021 RWTVDSCSDRQGSCGDADAVQLPKSLASLCLEDEPGTTGKAAR 1063


>ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
           gi|223534494|gb|EEF36194.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 782

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/93 (39%), Positives = 56/93 (60%)
 Frame = -1

Query: 309 VDVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPM 130
           VD++ + S  IQVL  WD+L SS + KLA+ LD +F +YT++K NCC++KC E  L +PM
Sbjct: 672 VDILQENSFQIQVLKIWDVLSSSHVAKLAESLDNLFRKYTIDKINCCKYKCFERNLVVPM 731

Query: 129 SWDIIPDAVKLDNIHNIERDQLSTEFASLRMKE 31
            W +    V   +       QLS   A+L +++
Sbjct: 732 RWPVNSSNVHRGSTSGTNLLQLSESLAALSLRD 764


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -1

Query: 306  DVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMS 127
            D+  + S   QVL  WDILP SE  KLA+ L+ + G YTV   N C+ KCIEG LE+PM 
Sbjct: 1020 DIFKENSNCTQVLKVWDILPRSETSKLARRLETLLGNYTVNDMNRCKVKCIEGNLEVPMR 1079

Query: 126  W-DIIPDAVKLDNIHNIERDQLSTEFASLRMKED 28
            W   + D  K   + +   + LS   ASLR+ ++
Sbjct: 1080 WPGNMNDTGKSLLLGDDPGELLSRSIASLRIWDE 1113


>emb|CBI22564.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -1

Query: 306  DVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEIPMS 127
            D+  + S   QVL  WDILP SE  KLA+ L+ + G YTV   N C+ KCIEG LE+PM 
Sbjct: 849  DIFKENSNCTQVLKVWDILPRSETSKLARRLETLLGNYTVNDMNRCKVKCIEGNLEVPMR 908

Query: 126  W-DIIPDAVKLDNIHNIERDQLSTEFASLRMKED 28
            W   + D  K   + +   + LS   ASLR+ ++
Sbjct: 909  WPGNMNDTGKSLLLGDDPGELLSRSIASLRIWDE 942


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