BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022284
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]              212   3e-53
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...   212   3e-53
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...   205   3e-51
ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like...   203   1e-50
ref|XP_002519451.1| Splicing factor 3A subunit, putative [Ricinu...   201   7e-50

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/122 (84%), Positives = 109/122 (89%), Gaps = 3/122 (2%)
 Frame = -1

Query: 445 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRIESCDKRYQYLLFAA 266
           RPGYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRHRFMSS+EQR++S DKRYQYLLFAA
Sbjct: 112 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAA 171

Query: 265 DPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---QPAPVAIGTEA 95
           +PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   QPA  A GT A
Sbjct: 172 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTA 231

Query: 94  PG 89
           PG
Sbjct: 232 PG 233


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/122 (84%), Positives = 109/122 (89%), Gaps = 3/122 (2%)
 Frame = -1

Query: 445 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRIESCDKRYQYLLFAA 266
           RPGYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRHRFMSS+EQR++S DKRYQYLLFAA
Sbjct: 112 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAA 171

Query: 265 DPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---QPAPVAIGTEA 95
           +PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   QPA  A GT A
Sbjct: 172 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTA 231

Query: 94  PG 89
           PG
Sbjct: 232 PG 233


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/123 (81%), Positives = 107/123 (86%), Gaps = 3/123 (2%)
 Frame = -1

Query: 445 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRIESCDKRYQYLLFAA 266
           RPGYRVTKQ+DPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQR++  DK YQYLLFAA
Sbjct: 112 RPGYRVTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKSYQYLLFAA 171

Query: 265 DPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---QPAPVAIGTEA 95
           +PYEI+AFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   QPA  A GT  
Sbjct: 172 EPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANGTAP 231

Query: 94  PGV 86
            GV
Sbjct: 232 SGV 234


>ref|XP_003545711.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 349

 Score =  203 bits (517), Expect = 1e-50
 Identities = 99/123 (80%), Positives = 106/123 (86%), Gaps = 3/123 (2%)
 Frame = -1

Query: 445 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRIESCDKRYQYLLFAA 266
           RPGYRVTKQ+DPETKQRSLLFQIEYPEIEDL KPRHRFMSSYEQR++  DKRYQYLLFAA
Sbjct: 112 RPGYRVTKQYDPETKQRSLLFQIEYPEIEDLMKPRHRFMSSYEQRVQPFDKRYQYLLFAA 171

Query: 265 DPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---QPAPVAIGTEA 95
           +PYEI+AFKVPS EIDKS+   F+HWDPDSKMFTLQLYFK KPPEA   QPA  A GT  
Sbjct: 172 EPYEIVAFKVPSTEIDKSTPNFFSHWDPDSKMFTLQLYFKSKPPEANKPQPASTANGTAP 231

Query: 94  PGV 86
            GV
Sbjct: 232 SGV 234


>ref|XP_002519451.1| Splicing factor 3A subunit, putative [Ricinus communis]
           gi|223541314|gb|EEF42865.1| Splicing factor 3A subunit,
           putative [Ricinus communis]
          Length = 327

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/123 (80%), Positives = 105/123 (85%), Gaps = 3/123 (2%)
 Frame = -1

Query: 445 RPGYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRIESCDKRYQYLLFAA 266
           RPGYRVTKQFD ETKQRSLLFQIEYPEIED TKPRHRFMSS+EQR++  DKRYQYLLFAA
Sbjct: 112 RPGYRVTKQFDHETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRMQPYDKRYQYLLFAA 171

Query: 265 DPYEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---QPAPVAIGTEA 95
           +PYEIIAFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   Q  P   G  A
Sbjct: 172 EPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKSQAPPAPNGVAA 231

Query: 94  PGV 86
           PGV
Sbjct: 232 PGV 234