BLASTX nr result

ID: Coptis25_contig00022283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022283
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...   129   3e-28
emb|CAN69421.1| hypothetical protein VITISV_037973 [Vitis vinifera]   129   3e-28
gb|AFN16167.1| hydroxyproline-rich glycoprotein family protein, ...   127   1e-27
gb|AFD50238.1| hydroxyproline-rich glycoprotein family protein, ...   127   1e-27

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/67 (89%), Positives = 65/67 (97%)
 Frame = -1

Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22
           GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P
Sbjct: 114 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 173

Query: 21  YEIIAFK 1
           YEIIAFK
Sbjct: 174 YEIIAFK 180


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/67 (89%), Positives = 65/67 (97%)
 Frame = -1

Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22
           GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P
Sbjct: 114 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 173

Query: 21  YEIIAFK 1
           YEIIAFK
Sbjct: 174 YEIIAFK 180


>emb|CAN69421.1| hypothetical protein VITISV_037973 [Vitis vinifera]
          Length = 427

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/67 (89%), Positives = 65/67 (97%)
 Frame = -1

Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22
           GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P
Sbjct: 110 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 169

Query: 21  YEIIAFK 1
           YEIIAFK
Sbjct: 170 YEIIAFK 176


>gb|AFN16167.1| hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria rivas-martinezii]
          Length = 72

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = -1

Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22
           GYRVTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSSYEQ+IE  DK+YQYLLFAA+P
Sbjct: 6   GYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQKIEPFDKKYQYLLFAAEP 65

Query: 21  YEIIAFK 1
           YEIIAFK
Sbjct: 66  YEIIAFK 72


>gb|AFD50238.1| hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria tenuis] gi|380293181|gb|AFD50239.1|
           hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria varia] gi|393701967|gb|AFN16172.1|
           hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria lachnophylla] gi|393701983|gb|AFN16180.1|
           hydroxyproline-rich glycoprotein family protein, partial
           [Micromeria pineolens]
          Length = 129

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/67 (89%), Positives = 64/67 (95%)
 Frame = -1

Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22
           GYRVTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSSYEQ+IE  DK+YQYLLFAA+P
Sbjct: 63  GYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQKIEPFDKKYQYLLFAAEP 122

Query: 21  YEIIAFK 1
           YEIIAFK
Sbjct: 123 YEIIAFK 129


Top