BLASTX nr result
ID: Coptis25_contig00022283
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022283 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30170.3| unnamed protein product [Vitis vinifera] 129 3e-28 ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit... 129 3e-28 emb|CAN69421.1| hypothetical protein VITISV_037973 [Vitis vinifera] 129 3e-28 gb|AFN16167.1| hydroxyproline-rich glycoprotein family protein, ... 127 1e-27 gb|AFD50238.1| hydroxyproline-rich glycoprotein family protein, ... 127 1e-27 >emb|CBI30170.3| unnamed protein product [Vitis vinifera] Length = 241 Score = 129 bits (323), Expect = 3e-28 Identities = 60/67 (89%), Positives = 65/67 (97%) Frame = -1 Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22 GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P Sbjct: 114 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 173 Query: 21 YEIIAFK 1 YEIIAFK Sbjct: 174 YEIIAFK 180 >ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera] Length = 357 Score = 129 bits (323), Expect = 3e-28 Identities = 60/67 (89%), Positives = 65/67 (97%) Frame = -1 Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22 GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P Sbjct: 114 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 173 Query: 21 YEIIAFK 1 YEIIAFK Sbjct: 174 YEIIAFK 180 >emb|CAN69421.1| hypothetical protein VITISV_037973 [Vitis vinifera] Length = 427 Score = 129 bits (323), Expect = 3e-28 Identities = 60/67 (89%), Positives = 65/67 (97%) Frame = -1 Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22 GYRVTKQFDPETKQRSLLFQIEYPEIEDL KPRH+FMSS+EQR++S DKRYQYLLFAA+P Sbjct: 110 GYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSFEQRVQSFDKRYQYLLFAAEP 169 Query: 21 YEIIAFK 1 YEIIAFK Sbjct: 170 YEIIAFK 176 >gb|AFN16167.1| hydroxyproline-rich glycoprotein family protein, partial [Micromeria rivas-martinezii] Length = 72 Score = 127 bits (318), Expect = 1e-27 Identities = 60/67 (89%), Positives = 64/67 (95%) Frame = -1 Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22 GYRVTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSSYEQ+IE DK+YQYLLFAA+P Sbjct: 6 GYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQKIEPFDKKYQYLLFAAEP 65 Query: 21 YEIIAFK 1 YEIIAFK Sbjct: 66 YEIIAFK 72 >gb|AFD50238.1| hydroxyproline-rich glycoprotein family protein, partial [Micromeria tenuis] gi|380293181|gb|AFD50239.1| hydroxyproline-rich glycoprotein family protein, partial [Micromeria varia] gi|393701967|gb|AFN16172.1| hydroxyproline-rich glycoprotein family protein, partial [Micromeria lachnophylla] gi|393701983|gb|AFN16180.1| hydroxyproline-rich glycoprotein family protein, partial [Micromeria pineolens] Length = 129 Score = 127 bits (318), Expect = 1e-27 Identities = 60/67 (89%), Positives = 64/67 (95%) Frame = -1 Query: 201 GYRVTKQFDPETKQRSLLFQIEYPEIEDLTKPRHKFMSSYEQRIESCDKRYQYLLFAADP 22 GYRVTKQFDPETKQRSLLFQIEYPEIED TKPRH+FMSSYEQ+IE DK+YQYLLFAA+P Sbjct: 63 GYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQKIEPFDKKYQYLLFAAEP 122 Query: 21 YEIIAFK 1 YEIIAFK Sbjct: 123 YEIIAFK 129