BLASTX nr result

ID: Coptis25_contig00022268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022268
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263343.1| PREDICTED: cyclic phosphodiesterase [Vitis v...   124   8e-27
ref|XP_003629873.1| Cyclic phosphodiesterase [Medicago truncatul...   124   1e-26
ref|XP_002317317.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002522285.1| Cyclic phosphodiesterase, putative [Ricinus ...   119   2e-25
ref|XP_004163357.1| PREDICTED: cyclic phosphodiesterase-like, pa...   115   5e-24

>ref|XP_002263343.1| PREDICTED: cyclic phosphodiesterase [Vitis vinifera]
           gi|297740575|emb|CBI30757.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/96 (58%), Positives = 76/96 (79%)
 Frame = +1

Query: 172 EPQEIKKSYSVWAIPPDHITERLKKIMLHLRSEFLSPEFEPHITLVGAIELTESDAVKKF 351
           E +  K+ YSVW IPP+ +  R+KK+M  LRSEF  P FEPH+T+VGAI LTE+DA+ KF
Sbjct: 4   ETESRKEVYSVWGIPPEEVGARVKKVMEGLRSEFGGPAFEPHVTVVGAISLTEADALHKF 63

Query: 352 KSACEAVKSYNVTVTSVSTGTFRYQCVFLLLNPSPQ 459
           +SAC+ +K+Y+ +V SV+TGTF YQCV+LLL+P P+
Sbjct: 64  RSACDGLKAYDASVDSVATGTFFYQCVYLLLHPMPE 99


>ref|XP_003629873.1| Cyclic phosphodiesterase [Medicago truncatula]
           gi|355523895|gb|AET04349.1| Cyclic phosphodiesterase
           [Medicago truncatula] gi|388520963|gb|AFK48543.1|
           unknown [Medicago truncatula]
          Length = 184

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/91 (63%), Positives = 73/91 (80%)
 Frame = +1

Query: 187 KKSYSVWAIPPDHITERLKKIMLHLRSEFLSPEFEPHITLVGAIELTESDAVKKFKSACE 366
           K+ YSVWAIPP+ + +RL K+M  LRS+F  P+FEPH+T+VGAIELT  DA+KK +SA E
Sbjct: 8   KEVYSVWAIPPEDVRDRLTKLMTSLRSDFGGPQFEPHMTVVGAIELTPDDALKKLRSASE 67

Query: 367 AVKSYNVTVTSVSTGTFRYQCVFLLLNPSPQ 459
            VKS+ VTV  VS GTF YQCV+LLL+P+PQ
Sbjct: 68  GVKSFQVTVDRVSAGTFFYQCVYLLLHPTPQ 98


>ref|XP_002317317.1| predicted protein [Populus trichocarpa] gi|222860382|gb|EEE97929.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/97 (58%), Positives = 74/97 (76%)
 Frame = +1

Query: 169 SEPQEIKKSYSVWAIPPDHITERLKKIMLHLRSEFLSPEFEPHITLVGAIELTESDAVKK 348
           S P + K  YSVWAIPP+ +  RLK++M  L SEF  P+FEPHIT+VGAI LTE DA++K
Sbjct: 8   STPADKKHVYSVWAIPPEDVGTRLKRLMAGLASEFGGPQFEPHITVVGAIGLTEQDALEK 67

Query: 349 FKSACEAVKSYNVTVTSVSTGTFRYQCVFLLLNPSPQ 459
           F SAC+ +++Y  TV  V+TGTF YQCV+LLL+P P+
Sbjct: 68  FHSACDGLQAYTATVDRVATGTFFYQCVYLLLHPLPE 104


>ref|XP_002522285.1| Cyclic phosphodiesterase, putative [Ricinus communis]
           gi|223538538|gb|EEF40143.1| Cyclic phosphodiesterase,
           putative [Ricinus communis]
          Length = 190

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/91 (59%), Positives = 72/91 (79%)
 Frame = +1

Query: 187 KKSYSVWAIPPDHITERLKKIMLHLRSEFLSPEFEPHITLVGAIELTESDAVKKFKSACE 366
           K  YSVWAIP + ++ RLKK+M  LRSEF  P+FEPH+T+VGAI LTE +A++KF+S+C+
Sbjct: 14  KYVYSVWAIPAEDVSARLKKLMEDLRSEFGGPQFEPHVTVVGAISLTEEEALEKFRSSCD 73

Query: 367 AVKSYNVTVTSVSTGTFRYQCVFLLLNPSPQ 459
            +  Y  TV  V+TGTF YQC++LLLNPSP+
Sbjct: 74  GLTRYIATVDRVATGTFFYQCIYLLLNPSPE 104


>ref|XP_004163357.1| PREDICTED: cyclic phosphodiesterase-like, partial [Cucumis sativus]
          Length = 108

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/103 (52%), Positives = 76/103 (73%)
 Frame = +1

Query: 151 QSQSHMSEPQEIKKSYSVWAIPPDHITERLKKIMLHLRSEFLSPEFEPHITLVGAIELTE 330
           +S S  S+ +E    YSVWA+PP+ ++ R++ +M  LRSEF  P FEPHIT+VGAI LT 
Sbjct: 5   ESASIQSDEEETHV-YSVWALPPEDVSARIENLMKSLRSEFGGPLFEPHITVVGAIRLTA 63

Query: 331 SDAVKKFKSACEAVKSYNVTVTSVSTGTFRYQCVFLLLNPSPQ 459
            DA+ KF++AC+ +K+Y  TV  V+TGTF YQCVFLL++P+ +
Sbjct: 64  EDALTKFRTACQGIKAYQATVDHVTTGTFFYQCVFLLIHPTTE 106


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