BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022266
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   639   0.0  
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   621   e-180
emb|CBI40731.3| unnamed protein product [Vitis vinifera]              618   e-174
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   602   e-173
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...   601   e-172

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  639 bits (1648), Expect(2) = 0.0
 Identities = 320/478 (66%), Positives = 383/478 (80%), Gaps = 5/478 (1%)
 Frame = +2

Query: 2    SVLSWQQNYKSKNVFSNFSYNNKPNPEAASDPLGHGGGFVXXXXXXXSCNLTAEGGPPV- 178
            S L+WQ+NY+ KN+  + S N+KP+PEA SDPLGHGGGFV       S     E   P  
Sbjct: 70   SALAWQKNYRPKNMNGDVS-NSKPDPEALSDPLGHGGGFVPETEP--SSIPAPENSEPAS 126

Query: 179  ----QNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRE 346
                +N+KKK  PTIFYASRTH+Q++Q IREYRKT+YRVPMAVL SRK YCTN+ +  + 
Sbjct: 127  AANGKNKKKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHYCTNRKINAKA 186

Query: 347  NIDEECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCHEAHDIEDLVKLGRAVKGCSY 526
            NIDEECK L++  D D GCPEF+N+HKVKGHPSLQKGGCHEAHDIEDLVK+G+ VKGC+Y
Sbjct: 187  NIDEECKLLVR--DQDFGCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAY 244

Query: 527  FAARSMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIED 706
            +AAR MA  AQLVFCPYSYI++P IR AME+D++G+I+ILDEAHNIED+ARDA SVD+E+
Sbjct: 245  YAARDMADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHNIEDMARDAGSVDVEE 304

Query: 707  DVLDTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRADTLVKREFQHYFSCWSGDKAL 886
            DVL  L+ EL QLC  D+ +YQPL++M + IISWI R+ +TL KREFQHYFSCW+GDKAL
Sbjct: 305  DVLHKLQTELGQLCPADAMIYQPLYEMTQDIISWIDRKKNTLEKREFQHYFSCWTGDKAL 364

Query: 887  GELQEAGISQQFFMILFECSTKAVKAASDAESKVREHLSGVSVIALEGFFTSLRYFFSGD 1066
             ELQEA ISQQ F IL EC+ KA+KAA D ES+V  HLSG+SVI LEG +++L YFFS +
Sbjct: 365  RELQEANISQQSFPILQECARKAIKAAIDIESRV-AHLSGMSVITLEGLYSALSYFFSEN 423

Query: 1067 GSCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMNPAVSFTEIADLSMSVILTSGTLSP 1246
            G  TVDY L LQ+Y+K+DAGS AG WT +FSLWC+NPAV F  IADLS+SVILTSGTLSP
Sbjct: 424  GLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 483

Query: 1247 MTSFSSELGAKFETSMEAPHVIDVKSQLWASVISTGPGNQPLNASYKTADAYDFQVVL 1420
            M SFSSELG +F T +EAPHVID++SQLWA++ ST PGN PLNASYKTADAY FQ  L
Sbjct: 484  MHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLNASYKTADAYAFQDAL 541



 Score = 38.5 bits (88), Expect(2) = 0.0
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 1411 GGALVFFPSYKLMEKLCT 1464
            GG LVFFPSYKLMEKLC+
Sbjct: 554  GGTLVFFPSYKLMEKLCS 571


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
            communis] gi|223551394|gb|EEF52880.1| brca1 interacting
            protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  621 bits (1601), Expect(2) = e-180
 Identities = 309/477 (64%), Positives = 377/477 (79%), Gaps = 4/477 (0%)
 Frame = +2

Query: 2    SVLSWQQNYKSKNVFSNFSYNNKPNPEAASDPLGHGGGFVXXXXXXX---SCNLTAEGGP 172
            S L+WQQNYKSK   ++ +  +KPNPEA +DP+GHGGGF+          S NL A    
Sbjct: 75   STLAWQQNYKSKQQLADLT-QSKPNPEAITDPIGHGGGFIPETQPSSIPPSGNLEAAQPA 133

Query: 173  PV-QNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGREN 349
             V + QKKKAAPTIFY+SRTH Q+TQ IREYRKT+YRVPMAVL SR+ YCTN +V G+EN
Sbjct: 134  AVSKTQKKKAAPTIFYSSRTHGQITQVIREYRKTAYRVPMAVLASRRHYCTNAHVNGKEN 193

Query: 350  IDEECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCHEAHDIEDLVKLGRAVKGCSYF 529
            IDEECK L+K  D D GC +F+N HKVKGHPSLQ+GGCHE HDIEDLVK+G+ V+GCSY+
Sbjct: 194  IDEECKLLLK--DPDAGCLQFKNAHKVKGHPSLQRGGCHEVHDIEDLVKVGKVVRGCSYY 251

Query: 530  AARSMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDD 709
            AARSMA +AQLVFCPY+Y+++P IR AME+D++G+I+ILDEAHNIEDIARDA SVD+E+D
Sbjct: 252  AARSMADDAQLVFCPYNYVINPVIRGAMEIDIRGAILILDEAHNIEDIARDAGSVDVEED 311

Query: 710  VLDTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRADTLVKREFQHYFSCWSGDKALG 889
            +L  L+ ELEQLC+ ++S+YQPL++M + ++SWI +R  TL K  FQHYFS WSGDKAL 
Sbjct: 312  ILYKLQTELEQLCVHNTSIYQPLYEMTQDLLSWIDQRKSTLQKHGFQHYFSSWSGDKALR 371

Query: 890  ELQEAGISQQFFMILFECSTKAVKAASDAESKVREHLSGVSVIALEGFFTSLRYFFSGDG 1069
            ELQEA ISQQ F IL +C+ KA+KAA+D E  +  HLSG++VI LEG F+SL YFFS +G
Sbjct: 372  ELQEANISQQCFPILLDCALKAIKAATDTEPDI-AHLSGMAVIVLEGLFSSLTYFFSRNG 430

Query: 1070 SCTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMNPAVSFTEIADLSMSVILTSGTLSPM 1249
                DY L LQ++IKRD  S  G WT + SLWC+NPAV F +IADLS+SVILTSGTLSPM
Sbjct: 431  CHVSDYQLALQRHIKRDRKSPVGEWTLTLSLWCLNPAVVFRDIADLSLSVILTSGTLSPM 490

Query: 1250 TSFSSELGAKFETSMEAPHVIDVKSQLWASVISTGPGNQPLNASYKTADAYDFQVVL 1420
             SFSSELG +F T +EAPHVID +SQ+WA+VISTGP N PLNASYKTAD + FQ  L
Sbjct: 491  NSFSSELGVQFGTCLEAPHVIDNESQVWAAVISTGPDNYPLNASYKTADEFAFQDAL 547



 Score = 38.1 bits (87), Expect(2) = e-180
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +1

Query: 1396 CIRFSGGALVFFPSYKLMEKLC 1461
            C+    G+LVFFPSYKLMEKLC
Sbjct: 555  CMIVPAGSLVFFPSYKLMEKLC 576


>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score =  618 bits (1593), Expect = e-174
 Identities = 315/506 (62%), Positives = 379/506 (74%), Gaps = 33/506 (6%)
 Frame = +2

Query: 2    SVLSWQQNYKSKNVFSNFSYNNKPNPEAASDPLGHGGGFVXXXXXXXSCNLTAEGGPPVQ 181
            S L+WQ+NY+ KN+  + S N+KP+PEA SDPLGHGGGFV         N         +
Sbjct: 70   SALAWQKNYRPKNMNGDVS-NSKPDPEALSDPLGHGGGFVPETEPSTPENSEPASAANGK 128

Query: 182  NQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENIDEE 361
            N+KKK  PTIFYASRTH+Q++Q IREYRKT+YRVPMAVL SRK YCTN+ +  + NIDEE
Sbjct: 129  NKKKKRKPTIFYASRTHTQISQVIREYRKTAYRVPMAVLASRKHYCTNRKINAKANIDEE 188

Query: 362  CKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCHEAHDIEDLVKLGRAVKGCSYFAARS 541
            CK L++  D D GCPEF+N+HKVKGHPSLQKGGCHEAHDIEDLVK+G+ VKGC+Y+AAR 
Sbjct: 189  CKLLVR--DQDFGCPEFKNMHKVKGHPSLQKGGCHEAHDIEDLVKVGQVVKGCAYYAARD 246

Query: 542  MAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAH------------------NIE 667
            MA  AQLVFCPYSYI++P IR AME+D++G+I+ILDEAH                  NIE
Sbjct: 247  MADNAQLVFCPYSYIINPVIRGAMELDIEGAILILDEAHSVFVLYMTSPIMSETITFNIE 306

Query: 668  DIARDAASVDIEDDVLDTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRADTLVKREF 847
            D+ARDA SVD+E+DVL  L+ EL QLC  D+ +YQPL++M + IISWI R+ +TL KREF
Sbjct: 307  DMARDAGSVDVEEDVLHKLQTELGQLCPADAMIYQPLYEMTQDIISWIDRKKNTLEKREF 366

Query: 848  QHYFSCWSGDKALGELQEAGISQQFFMILFECSTKAVKAASDAESKVREHLSGVSVIALE 1027
            QHYFSCW+GDKAL ELQEA ISQQ F IL EC+ KA+KAA D ES+V  HLSG+SVI LE
Sbjct: 367  QHYFSCWTGDKALRELQEANISQQSFPILQECARKAIKAAIDIESRV-AHLSGMSVITLE 425

Query: 1028 GFFTSLRYFFSGDGSCTVDYNLVLQKYIKRDAGSKAGI---------------WTQSFSL 1162
            G +++L YFFS +G  TVDY L LQ+Y+K+DAG    +               WT +FSL
Sbjct: 426  GLYSALSYFFSENGLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLVEFIQNWTCTFSL 485

Query: 1163 WCMNPAVSFTEIADLSMSVILTSGTLSPMTSFSSELGAKFETSMEAPHVIDVKSQLWASV 1342
            WC+NPAV F  IADLS+SVILTSGTLSPM SFSSELG +F T +EAPHVID++SQLWA++
Sbjct: 486  WCLNPAVVFRGIADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAI 545

Query: 1343 ISTGPGNQPLNASYKTADAYDFQVVL 1420
             ST PGN PLNASYKTADAY FQ  L
Sbjct: 546  FSTSPGNYPLNASYKTADAYAFQDAL 571


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  602 bits (1552), Expect(2) = e-173
 Identities = 307/476 (64%), Positives = 362/476 (76%), Gaps = 3/476 (0%)
 Frame = +2

Query: 2    SVLSWQQNYKSKNVFSNFSYNNKPNPEAASDPLGHGGGFVXXXXXXXSCNLTAEGGPPVQ 181
            S L+WQ+NYK KN  +N   + K  PEAA+DPLG GGGF+                P + 
Sbjct: 81   SSLAWQKNYKIKNPDAN-PCHTKAAPEAATDPLGFGGGFIPEVQTPSKFACLYPDYPNIS 139

Query: 182  N---QKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENI 352
            N   Q KK APTI+YASRTHSQ++Q IREYRKT+YRVPMAVL SRK  CTN YV G++N+
Sbjct: 140  NARIQLKKTAPTIYYASRTHSQISQVIREYRKTAYRVPMAVLASRKHLCTNPYVRGKDNL 199

Query: 353  DEECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCHEAHDIEDLVKLGRAVKGCSYFA 532
            DEECK L+K  D   GC EF+N +KVK HP+LQKGGCHE HDIEDLVK+G AVKGCSY+A
Sbjct: 200  DEECKLLLK--DQIAGCSEFKNANKVKCHPTLQKGGCHEVHDIEDLVKVGEAVKGCSYYA 257

Query: 533  ARSMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDV 712
            ARSMA +AQLVFCPYSYI++P IR AM+VD+KG+IVI DEAHNIEDIAR   SVDIE+D 
Sbjct: 258  ARSMADDAQLVFCPYSYIINPVIRGAMDVDIKGAIVIFDEAHNIEDIARHGGSVDIEEDT 317

Query: 713  LDTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRADTLVKREFQHYFSCWSGDKALGE 892
            L+ L+ ELE LC +DS VYQPL++M + + SWI +R  TL KREFQHY +CW+G+ A  E
Sbjct: 318  LNKLQMELEDLCPIDSLVYQPLYEMTQDLTSWIDQRKTTLQKREFQHYVTCWTGNHAQRE 377

Query: 893  LQEAGISQQFFMILFECSTKAVKAASDAESKVREHLSGVSVIALEGFFTSLRYFFSGDGS 1072
            LQEA I+QQ F IL EC+TKA+KAASD ES    HLSG+SVI LEG F+SL YFFS +G 
Sbjct: 378  LQEANITQQCFPILLECATKAIKAASDTESD-DAHLSGLSVITLEGLFSSLTYFFSRNGC 436

Query: 1073 CTVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMNPAVSFTEIADLSMSVILTSGTLSPMT 1252
               DY L LQ+YIKRD G     WT + SLWC+NPAV F +I+DLS+SVILTSGTLSPM 
Sbjct: 437  HMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLNPAVVFRDISDLSLSVILTSGTLSPMN 496

Query: 1253 SFSSELGAKFETSMEAPHVIDVKSQLWASVISTGPGNQPLNASYKTADAYDFQVVL 1420
            SFSSELG +F TS+EAPHVIDV+SQ+W +VISTGPGN PLN SYKTAD Y FQ  L
Sbjct: 497  SFSSELGVQFGTSLEAPHVIDVESQVWPAVISTGPGNYPLNGSYKTADGYAFQDAL 552



 Score = 34.7 bits (78), Expect(2) = e-173
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 1411 GGALVFFPSYKLMEKL 1458
            GG LVFFPSYKLMEKL
Sbjct: 565  GGCLVFFPSYKLMEKL 580


>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
            predicted protein [Populus trichocarpa]
          Length = 1183

 Score =  601 bits (1550), Expect(2) = e-172
 Identities = 299/475 (62%), Positives = 370/475 (77%), Gaps = 2/475 (0%)
 Frame = +2

Query: 2    SVLSWQQNYKSKNVFSNFSYNNKPNPEAASDPLGHGGGFVXXXXXXXSCNLTAE--GGPP 175
            S L+WQQNYK KN ++N +++  PNPEA +DPL HGGGFV       +    A       
Sbjct: 74   STLAWQQNYKLKNQYANLTHST-PNPEAITDPLAHGGGFVPESTPSSTEPTAAVELAQKV 132

Query: 176  VQNQKKKAAPTIFYASRTHSQLTQAIREYRKTSYRVPMAVLGSRKLYCTNKYVCGRENID 355
              N+KKKA P I+YASRTHSQ++Q + E+RKT+YRVPMAVL SRK YCTN +V  +ENID
Sbjct: 133  ASNKKKKAVPKIYYASRTHSQISQVVSEFRKTTYRVPMAVLASRKHYCTNVHVNRKENID 192

Query: 356  EECKSLMKSKDGDQGCPEFRNVHKVKGHPSLQKGGCHEAHDIEDLVKLGRAVKGCSYFAA 535
            EECK L+K K+   GC +F+N +KV+GHPSLQKGGCHE HDIEDLVK+G+ VKGCSY+AA
Sbjct: 193  EECKLLLKDKEA--GCLQFKNANKVRGHPSLQKGGCHEVHDIEDLVKVGQVVKGCSYYAA 250

Query: 536  RSMAQEAQLVFCPYSYILSPSIRRAMEVDLKGSIVILDEAHNIEDIARDAASVDIEDDVL 715
            RSMA +AQLVFCPY+YI++P IR AMEVD+ G+I++LDEAHNIEDIARDA SVD+E+DVL
Sbjct: 251  RSMADDAQLVFCPYNYIINPVIRGAMEVDIIGAILVLDEAHNIEDIARDAGSVDVEEDVL 310

Query: 716  DTLKRELEQLCLVDSSVYQPLHDMLEGIISWIGRRADTLVKREFQHYFSCWSGDKALGEL 895
              L+ EL++LC VD  +YQPL++M + ++SWI RR + L KREFQHY SCW+GDKAL E 
Sbjct: 311  QKLQTELQELCPVDPMIYQPLYEMAQDLLSWIERRKNKLEKREFQHYCSCWAGDKALREF 370

Query: 896  QEAGISQQFFMILFECSTKAVKAASDAESKVREHLSGVSVIALEGFFTSLRYFFSGDGSC 1075
            QEA ISQQ F IL +C+ +A+KAA+D E++   HLSG+SV+ LEG F+SL YFFS +G  
Sbjct: 371  QEANISQQCFPILLDCAKQAIKAATDTEAE-GSHLSGMSVVLLEGLFSSLTYFFSRNGCQ 429

Query: 1076 TVDYNLVLQKYIKRDAGSKAGIWTQSFSLWCMNPAVSFTEIADLSMSVILTSGTLSPMTS 1255
              D+ L L++Y+KRD G KAG WT + SLWC+NPAV F +IADLS+SVILTSGTLSPM S
Sbjct: 430  VSDFQLALRRYVKRD-GKKAGDWTCTLSLWCLNPAVVFKDIADLSLSVILTSGTLSPMNS 488

Query: 1256 FSSELGAKFETSMEAPHVIDVKSQLWASVISTGPGNQPLNASYKTADAYDFQVVL 1420
            FSSELG +F T +EAPHV+DV+SQ+  SVIST P N PLNASYKTAD Y FQ  L
Sbjct: 489  FSSELGVQFGTCLEAPHVVDVESQVCVSVISTSPDNYPLNASYKTADCYTFQDAL 543



 Score = 33.1 bits (74), Expect(2) = e-172
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 1396 CIRFSGGALVFFPSYKLMEKL 1458
            C     G+LVFFPSYKLMEKL
Sbjct: 551  CKIVPAGSLVFFPSYKLMEKL 571