BLASTX nr result

ID: Coptis25_contig00022263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022263
         (1420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]   337   5e-90
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...   335   2e-89
emb|CBI31672.3| unnamed protein product [Vitis vinifera]              324   4e-86
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   320   7e-85
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              318   2e-84

>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score =  337 bits (864), Expect = 5e-90
 Identities = 182/344 (52%), Positives = 207/344 (60%), Gaps = 10/344 (2%)
 Frame = +1

Query: 22   MAFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 186
            M FSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1    MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 187  ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 366
            ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61   ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 367  VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 543
            VGGGC             P T ERQ                D+IG               
Sbjct: 121  VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 544  XLHHLPDYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 723
             LHHL DYG  D+GLNF GIQP +    GG S +D++F I                   A
Sbjct: 181  XLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 724  EQWRL---QQFPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 891
            EQWRL   QQFPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237  EQWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 892  KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFSPSSTNHMI 1023
            K+E++QGLNLSR FLG+PGNDQY   N W DLSGF+ S+T+H++
Sbjct: 295  KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSGFNSSTTSHLL 338


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score =  335 bits (859), Expect = 2e-89
 Identities = 180/344 (52%), Positives = 205/344 (59%), Gaps = 10/344 (2%)
 Frame = +1

Query: 22   MAFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 186
            M FSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1    MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 187  ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 366
            ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61   ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 367  VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 543
            VGGGC             P T ERQ                D+IG               
Sbjct: 121  VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 544  XLHHLPDYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 723
             LHHL DYG  D+GLNF GIQP +    GG S +D++F I                   A
Sbjct: 181  PLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 724  EQWRL---QQFPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 891
            E WRL   QQFPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237  EHWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 892  KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFSPSSTNHMI 1023
            K+E++QGLNLSR FLG+PGNDQY   N W DLSGF+ S+T+H++
Sbjct: 295  KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSGFNSSTTSHLL 338


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  324 bits (830), Expect = 4e-86
 Identities = 176/334 (52%), Positives = 196/334 (58%), Gaps = 10/334 (2%)
 Frame = +1

Query: 22  MAFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 186
           M FSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1   MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 187 ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 366
           ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61  ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 367 VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 543
           VGGGC             P T ERQ                D+IG               
Sbjct: 121 VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 544 XLHHLPDYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 723
            LHHL DYG  D+GLNF GIQP +    GG S +D++F I                   A
Sbjct: 181 PLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 724 EQWRL---QQFPFIGGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 891
           E WRL   QQFPF+ GLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237 EHWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 892 KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSG 993
           K+E++QGLNLSR FLG+PGNDQY   N W DLSG
Sbjct: 295 KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSG 328


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  320 bits (819), Expect = 7e-85
 Identities = 176/341 (51%), Positives = 201/341 (58%), Gaps = 9/341 (2%)
 Frame = +1

Query: 22   MAFSSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXXAGVGMGSIRPGSMADRA 198
            M FSS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRA
Sbjct: 1    MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 199  RMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 378
            R+A +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG
Sbjct: 61   RLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 120

Query: 379  CXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIGXXXXXXXXXXXXXXXLHHL 558
            C             P + +RQ                +I+G               LHHL
Sbjct: 121  CRRNKRSKGSSSKSPVSGDRQAGSSSTGAIHSNCSTAEILG--LAPQIPPMRFMAPLHHL 178

Query: 559  PDYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQI-----XXXXXXXXXXXXXXXXXXXA 723
             DYG  D+GLN+SGI P  V  TG     DM+FQI                         
Sbjct: 179  ADYGAGDIGLNYSGI-PTAVGGTG-----DMNFQIGSHLGGGSSGGAGGVGGSFLSVGGL 232

Query: 724  EQWRL---QQFPFIGGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVK 894
            EQWRL   QQFPF+GGL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VK
Sbjct: 233  EQWRLQQTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVK 290

Query: 895  MEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFSPSSTNH 1017
            MED+  +N++RQFLGIPGNDQY G NAWTDL+ FS SST+H
Sbjct: 291  MEDNHEMNVARQFLGIPGNDQYWGGNAWTDLASFSSSSTSH 331


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  318 bits (815), Expect = 2e-84
 Identities = 175/334 (52%), Positives = 199/334 (59%), Gaps = 4/334 (1%)
 Frame = +1

Query: 22   MAFSSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXXAGVGMGSIRPGSMADRA 198
            M FSS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRA
Sbjct: 1    MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 199  RMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 378
            R+A +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG
Sbjct: 61   RLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 120

Query: 379  CXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIGXXXXXXXXXXXXXXXLHHL 558
            C             P + +RQ                +I+G               LHHL
Sbjct: 121  CRRNKRSKGSSSKSPVSGDRQAGSSSTGAIHSNCSTAEILG--LAPQIPPMRFMAPLHHL 178

Query: 559  PDYGGADVGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXAEQWRL 738
             DYG  D+GLN+SGI P  V  TG     DM+FQI                    EQWRL
Sbjct: 179  ADYGAGDIGLNYSGI-PTAVGGTG-----DMNFQI-----------------GSLEQWRL 215

Query: 739  ---QQFPFIGGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVKMEDHQ 909
               QQFPF+GGL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VKMED+ 
Sbjct: 216  QQTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVKMEDNH 273

Query: 910  GLNLSRQFLGIPGNDQYLGSNAWTDLSGFSPSST 1011
             +N++RQFLGIPGNDQY G NAWTDL+ FS SST
Sbjct: 274  EMNVARQFLGIPGNDQYWGGNAWTDLASFSSSST 307


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