BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022262
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   640   0.0  
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-179
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   615   e-174
gb|ABD96949.1| hypothetical protein [Cleome spinosa]                  566   e-159

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Vitis vinifera]
          Length = 662

 Score =  640 bits (1650), Expect = 0.0
 Identities = 296/471 (62%), Positives = 387/471 (82%)
 Frame = -1

Query: 1535 LQRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCI 1356
            L+++F+E   +D++ WN+L+SGY +CR++ DA+ V+R+M++ + +RP+EATVV TLS CI
Sbjct: 186  LRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACI 245

Query: 1355 ALQNLELGKELHYYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            AL+ LELGKE+H Y+ ++L FT  +GNAL+DMY KCG L +AR++F++M IK VI WT++
Sbjct: 246  ALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSM 305

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDK 996
            VSGYVNCG+L EARELFERSP +DVVLWT MING VQF+ FD+A+ALF +MQ ++V PD+
Sbjct: 306  VSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDR 365

Query: 995  FTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRR 816
            FT+V LLTGCAQLG LEQG+W+HGYI++N +++D VV TALI+MYAKCG ++KSLEIF  
Sbjct: 366  FTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNG 425

Query: 815  TKKKDTASWTALICGFAMNGQTNKALELFSQMEHCGGKPDDITFIGVLSACSHGGLVEEG 636
             K+KDTASWT++ICG AMNG+T+KALELF++M   G KPDDITFIGVLSACSHGGLVEEG
Sbjct: 426  LKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG 485

Query: 635  CCYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLG 456
              +F SM   ++IEPK+EHYGCL+DL GRAG LDEAE LI+  PN +++V++PL+ +LL 
Sbjct: 486  RKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLS 545

Query: 455  ACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKMKDLGIKKT 276
            ACR H NV MGERVA+R++G+ES +S +H+L AN+YA+ADRWEDVTKVRRKMKDLG+KK 
Sbjct: 546  ACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKV 605

Query: 275  PGCSSIEVNGVFHEFLVADSSHPKARESYAXXXXXXXXXLSSQENVIDGSI 123
            PGCSS+EVNG+ HEFLV D+SHP+ RE Y+         L   EN ++G I
Sbjct: 606  PGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEI 656



 Score =  134 bits (337), Expect = 6e-29
 Identities = 86/332 (25%), Positives = 158/332 (47%), Gaps = 33/332 (9%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            +R+F       +  +N+++  +T+   F  A+L++RQ+ +  G+ PD  T          
Sbjct: 86   ERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLRE-EGLSPDNFTYPFVFKAIGC 144

Query: 1352 LQNLELGKELHYYISKE-LEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            L  +  G++++ ++ K  LEF T + N+LMDMYA+ G                       
Sbjct: 145  LGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVG----------------------- 181

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNR-KVKPD 999
                    ++   R++FE  P +DVV W  +I+G V+   +++A+ +F  MQ +  ++P+
Sbjct: 182  --------RVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPN 233

Query: 998  KFTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCG---------- 849
            + TVV+ L+ C  L  LE G+ +H Y+ +  +   + +  AL+DMY KCG          
Sbjct: 234  EATVVSTLSACIALKMLELGKEIHRYVRE-QLGFTIKIGNALVDMYCKCGHLSIAREIFN 292

Query: 848  --------C-------------MDKSLEIFRRTKKKDTASWTALICGFAMNGQTNKALEL 732
                    C             +D++ E+F R+  +D   WTA+I G+    + + A+ L
Sbjct: 293  DMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVAL 352

Query: 731  FSQMEHCGGKPDDITFIGVLSACSHGGLVEEG 636
            F +M+     PD  T + +L+ C+  G +E+G
Sbjct: 353  FREMQIKRVSPDRFTLVALLTGCAQLGTLEQG 384



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 6/223 (2%)
 Frame = -1

Query: 1154 GKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKFTVVTLL 975
            G LH A  +F       + ++  +I    +   F +A+ LF  ++   + PD FT   + 
Sbjct: 80   GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139

Query: 974  TGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRTKKKDTA 795
                 LG + +G  V+G++  + +  D  V  +L+DMYA+ G +    ++F    ++D  
Sbjct: 140  KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199

Query: 794  SWTALICGFAMNGQTNKALELFSQMEHCGG-KPDDITFIGVLSACSHGGLVEEGCCYFDS 618
            SW  LI G+    +   A+++F +M+     +P++ T +  LSAC    ++E G      
Sbjct: 200  SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELG------ 253

Query: 617  MKRTHKIEPK-----IEHYGCLVDLFGRAGLLDEAERLIDTIP 504
             K  H+   +     I+    LVD++ + G L  A  + + +P
Sbjct: 254  -KEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMP 295


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  635 bits (1637), Expect = e-179
 Identities = 290/446 (65%), Positives = 369/446 (82%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            ++LF E   +D + WN+++SGY RCR+F DA+  +R+M++    +PDEATVV TLS C A
Sbjct: 252  KKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTA 311

Query: 1352 LQNLELGKELHYYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTIV 1173
            L+NLELG E+H Y+ KEL FTT + NAL+DMYAKCG L +AR +FDEM +KNVI WT+++
Sbjct: 312  LKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMI 371

Query: 1172 SGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKF 993
            SGY+NCG L EAR+LF++SP +DVVLWT MING VQF HFD+A+ALF +MQ +K+KPDKF
Sbjct: 372  SGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKF 431

Query: 992  TVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRT 813
            TVVTLLTGCAQLGALEQG+W+HGY+++N + MDVVV TALI+MY+KCGC+DKSLEIF   
Sbjct: 432  TVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL 491

Query: 812  KKKDTASWTALICGFAMNGQTNKALELFSQMEHCGGKPDDITFIGVLSACSHGGLVEEGC 633
            + KDTASWT++ICG AMNG+T++AL LFS+ME  G KPDDITFIGVLSACSHGGLVEEG 
Sbjct: 492  EDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR 551

Query: 632  CYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLGA 453
             +F+SMK+ H+IEPK+EHYGC++DL GRAGLLDEAE LI  IP  + ++++PL+ +LL A
Sbjct: 552  RFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSA 611

Query: 452  CRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKMKDLGIKKTP 273
            CRIH NV MGER+A+++  +ES +S IH+L AN+YA+ DRWED  KVRRKMK+LG+KK P
Sbjct: 612  CRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMP 671

Query: 272  GCSSIEVNGVFHEFLVADSSHPKARE 195
            GCS IEV+G+ HEFLV D SHP+  E
Sbjct: 672  GCSLIEVDGIVHEFLVGDPSHPEMIE 697



 Score =  128 bits (322), Expect = 4e-27
 Identities = 86/368 (23%), Positives = 171/368 (46%), Gaps = 33/368 (8%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            +++F    D  +  +N+++  Y +       LL+++Q+ + +G+ PD  T    L     
Sbjct: 151  EKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLRE-DGLWPDGFTYPFVLKAIGC 209

Query: 1352 LQNLELGKELHYYISKE-LEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            L+++  G+++  +I K  ++    + N+L+DMY +  ++  A+++FDEM  ++ +SW  +
Sbjct: 210  LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 269

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNR-KVKPD 999
            +SGYV C +                               F++A+  F +MQ     KPD
Sbjct: 270  ISGYVRCRR-------------------------------FEDAINTFREMQQEGNEKPD 298

Query: 998  KFTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMD------- 840
            + TVV+ L+ C  L  LE G  +H Y+    +     +  AL+DMYAKCGC++       
Sbjct: 299  EATVVSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDMYAKCGCLNIARNIFD 357

Query: 839  ------------------------KSLEIFRRTKKKDTASWTALICGFAMNGQTNKALEL 732
                                    ++ ++F ++  +D   WTA+I G+      + A+ L
Sbjct: 358  EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVAL 417

Query: 731  FSQMEHCGGKPDDITFIGVLSACSHGGLVEEGCCYFDSMKRTHKIEPKIEHYGCLVDLFG 552
            F +M+    KPD  T + +L+ C+  G +E+G  +       ++I   +     L++++ 
Sbjct: 418  FREMQIQKIKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYS 476

Query: 551  RAGLLDEA 528
            + G +D++
Sbjct: 477  KCGCVDKS 484



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
 Frame = -1

Query: 1154 GKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKFTVVTLL 975
            G L  A ++F       + ++  M+    +     + L LF  ++   + PD FT   +L
Sbjct: 145  GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204

Query: 974  TGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRTKKKDTA 795
                 L  + QG  V G+I    + +D  V  +LIDMY +   ++ + ++F     +D+ 
Sbjct: 205  KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264

Query: 794  SWTALICGFAMNGQTNKALELFSQMEHCGG-KPDDITFIGVLSACSHGGLVEEGCCYFDS 618
            SW  +I G+    +   A+  F +M+  G  KPD+ T +  LSAC+    +E G    + 
Sbjct: 265  SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324

Query: 617  MKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLID 513
            +++      +I++   L+D++ + G L+ A  + D
Sbjct: 325  VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFD 357


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31430-like
            [Cucumis sativus]
          Length = 781

 Score =  635 bits (1637), Expect = e-179
 Identities = 290/446 (65%), Positives = 369/446 (82%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            ++LF E   +D + WN+++SGY RCR+F DA+  +R+M++    +PDEATVV TLS C A
Sbjct: 298  KKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTA 357

Query: 1352 LQNLELGKELHYYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTIV 1173
            L+NLELG E+H Y+ KEL FTT + NAL+DMYAKCG L +AR +FDEM +KNVI WT+++
Sbjct: 358  LKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMI 417

Query: 1172 SGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKF 993
            SGY+NCG L EAR+LF++SP +DVVLWT MING VQF HFD+A+ALF +MQ ++VKPDKF
Sbjct: 418  SGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKF 477

Query: 992  TVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRT 813
            TVVTLLTGCAQLGALEQG+W+HGY+++N + MDVVV TALI+MY+KCGC+DKSLEIF   
Sbjct: 478  TVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL 537

Query: 812  KKKDTASWTALICGFAMNGQTNKALELFSQMEHCGGKPDDITFIGVLSACSHGGLVEEGC 633
            + KDTASWT++ICG AMNG+T++AL LFS+ME  G KPDDITFIGVLSACSHGGLVEEG 
Sbjct: 538  EDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGR 597

Query: 632  CYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLGA 453
             +F+SMK+ H+IEPK+EHYGC++DL GRAGLLDEAE LI  IP  + ++++PL+ +LL A
Sbjct: 598  RFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSA 657

Query: 452  CRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKMKDLGIKKTP 273
            CRIH NV MGER+A+++  +ES +S IH+L AN+YA+ DRWED  KVRRKMK+LG+KK P
Sbjct: 658  CRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMP 717

Query: 272  GCSSIEVNGVFHEFLVADSSHPKARE 195
            GCS IEV+G+ HEFLV D SHP+  E
Sbjct: 718  GCSLIEVDGIVHEFLVGDPSHPEMME 743



 Score =  129 bits (324), Expect = 2e-27
 Identities = 86/368 (23%), Positives = 171/368 (46%), Gaps = 33/368 (8%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            +++F    D  +  +N+++  Y +       LL+++Q+ + +G+ PD  T    L     
Sbjct: 197  EKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLRE-DGLWPDGFTYPFVLKAIGC 255

Query: 1352 LQNLELGKELHYYISKE-LEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            L+++  G+++  +I K  ++    + N+L+DMY +  ++  A+++FDEM  ++ +SW  +
Sbjct: 256  LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 315

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNR-KVKPD 999
            +SGYV C +                               F++A+  F +MQ     KPD
Sbjct: 316  ISGYVRCRR-------------------------------FEDAINTFREMQQEGNEKPD 344

Query: 998  KFTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMD------- 840
            + TVV+ L+ C  L  LE G  +H Y+    +     +  AL+DMYAKCGC++       
Sbjct: 345  EATVVSTLSACTALKNLELGDEIHNYVR-KELGFTTRIDNALLDMYAKCGCLNIARNIFD 403

Query: 839  ------------------------KSLEIFRRTKKKDTASWTALICGFAMNGQTNKALEL 732
                                    ++ ++F ++  +D   WTA+I G+      + A+ L
Sbjct: 404  EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVAL 463

Query: 731  FSQMEHCGGKPDDITFIGVLSACSHGGLVEEGCCYFDSMKRTHKIEPKIEHYGCLVDLFG 552
            F +M+    KPD  T + +L+ C+  G +E+G  +       ++I   +     L++++ 
Sbjct: 464  FREMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYS 522

Query: 551  RAGLLDEA 528
            + G +D++
Sbjct: 523  KCGCVDKS 530



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
 Frame = -1

Query: 1154 GKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKFTVVTLL 975
            G L  A ++F       + ++  M+    +     + L LF  ++   + PD FT   +L
Sbjct: 191  GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 250

Query: 974  TGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRTKKKDTA 795
                 L  + QG  V G+I    + +D  V  +LIDMY +   ++ + ++F     +D+ 
Sbjct: 251  KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 310

Query: 794  SWTALICGFAMNGQTNKALELFSQMEHCGG-KPDDITFIGVLSACSHGGLVEEGCCYFDS 618
            SW  +I G+    +   A+  F +M+  G  KPD+ T +  LSAC+    +E G    + 
Sbjct: 311  SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 370

Query: 617  MKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLID 513
            +++      +I++   L+D++ + G L+ A  + D
Sbjct: 371  VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFD 403


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  615 bits (1587), Expect = e-174
 Identities = 290/469 (61%), Positives = 375/469 (79%)
 Frame = -1

Query: 1535 LQRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCI 1356
            ++ LF E  D+D+I WN+++SGY +CR+F DA+ V+ +M++ +G+ PDEATVV TLS C 
Sbjct: 191  MKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACT 250

Query: 1355 ALQNLELGKELHYYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            AL+ LELGK++H+Y+   ++FT ++GNAL+DMY KCG L +AR VF+EM  KNVI WTT+
Sbjct: 251  ALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTM 310

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDK 996
            VSGY NCG+L EARELFE SP +DVV+WT MING VQF+ FDEA+ALF +MQ RKVKPDK
Sbjct: 311  VSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDK 370

Query: 995  FTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRR 816
            F VV+LLTGCAQ GA+EQG+W+H +I++N + +D VV TALI+MYAKCG ++K+LEIF  
Sbjct: 371  FIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYG 430

Query: 815  TKKKDTASWTALICGFAMNGQTNKALELFSQMEHCGGKPDDITFIGVLSACSHGGLVEEG 636
             + KDTASWT++ICG AMNG+T+KALELFS+M+  G +PDDITFIGVLSACSHGGLVEEG
Sbjct: 431  LRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEG 490

Query: 635  CCYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLG 456
              +F+SM+  ++I+PK+EHYGCLVDL GRAGLL+EAE LI  IP+ +  + +PL+ SLL 
Sbjct: 491  RKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLS 550

Query: 455  ACRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKMKDLGIKKT 276
            ACRI+ NV MGERVA++++  ESS+S +H+L AN+YA ADRWEDVTKVRRKMKDLG+KKT
Sbjct: 551  ACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKT 610

Query: 275  PGCSSIEVNGVFHEFLVADSSHPKARESYAXXXXXXXXXLSSQENVIDG 129
            PGCSSIEV+ + HEF     SHP+ RE Y          L S +N ++G
Sbjct: 611  PGCSSIEVDSIIHEFFSGHPSHPEMREIYYMLNIMAKPLLGSAKNEMEG 659



 Score =  134 bits (336), Expect = 8e-29
 Identities = 88/368 (23%), Positives = 172/368 (46%), Gaps = 33/368 (8%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            +++FK      ++ +N+++  + +   +   L+++ ++ + +G+ PD  T          
Sbjct: 91   EKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLRE-DGLWPDNFTYPFVFKAIGY 149

Query: 1352 LQNLELGKELHYYISKE-LEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTI 1176
            L  +   ++L   ++K  LEF T + N+L+DMYA+     + + +FDEM  ++VISW  +
Sbjct: 150  LGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVM 209

Query: 1175 VSGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRK-VKPD 999
            +SGYV C +                               F++A+ +F  MQ    + PD
Sbjct: 210  ISGYVKCRR-------------------------------FEDAINVFCRMQEESGLMPD 238

Query: 998  KFTVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGC--------- 846
            + TVV+ L+ C  L  LE G+ +H Y+ D NV    ++  AL+DMY KCGC         
Sbjct: 239  EATVVSTLSACTALKRLELGKKIHHYVRD-NVKFTPIIGNALLDMYCKCGCLSIARAVFE 297

Query: 845  ----------------------MDKSLEIFRRTKKKDTASWTALICGFAMNGQTNKALEL 732
                                  ++++ E+F  +  +D   WTA+I G+    + ++A+ L
Sbjct: 298  EMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVAL 357

Query: 731  FSQMEHCGGKPDDITFIGVLSACSHGGLVEEGCCYFDSMKRTHKIEPKIEHYGCLVDLFG 552
            F +M+    KPD    + +L+ C+  G +E+G    + +   ++I         L++++ 
Sbjct: 358  FREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDE-NRIPIDAVVGTALIEMYA 416

Query: 551  RAGLLDEA 528
            + G +++A
Sbjct: 417  KCGFIEKA 424



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 12/321 (3%)
 Frame = -1

Query: 1154 GKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKFTVVTLL 975
            G L+ A ++F+      ++++  +I    +  ++   L LF+ ++   + PD FT   + 
Sbjct: 85   GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVF 144

Query: 974  TGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRTKKKDTA 795
                 LG + +   + G +    +  D  V  +LIDMYA+    D    +F     +D  
Sbjct: 145  KAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVI 204

Query: 794  SWTALICGFAMNGQTNKALELFSQM-EHCGGKPDDITFIGVLSACSHGGLVEEGCCYFDS 618
            SW  +I G+    +   A+ +F +M E  G  PD+ T +  LSAC+    +E G      
Sbjct: 205  SWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY 264

Query: 617  MKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLGACRIHR 438
            ++   K  P I +   L+D++ + G L  A  + + +P  S +V+   W++++     + 
Sbjct: 265  VRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMP--SKNVI--CWTTMVSG---YA 315

Query: 437  NVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKM--------KDLGIK 282
            N    E       G    +  I +   N Y   +R+++   + R+M        K + + 
Sbjct: 316  NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVS 375

Query: 281  KTPGCS---SIEVNGVFHEFL 228
               GC+   +IE     HEF+
Sbjct: 376  LLTGCAQTGAIEQGKWIHEFI 396


>gb|ABD96949.1| hypothetical protein [Cleome spinosa]
          Length = 639

 Score =  566 bits (1459), Expect = e-159
 Identities = 266/441 (60%), Positives = 348/441 (78%)
 Frame = -1

Query: 1532 QRLFKETLDKDIICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIA 1353
            +++F E  ++D++ WN+L+S Y   RKF DA+ V+R+M + + ++ DEATVV TLS C  
Sbjct: 169  KKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSV 228

Query: 1352 LQNLELGKELHYYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTIV 1173
            L+N E+G+E+H Y+  ELE TT +GNAL+DMY KCG +  AR +FDEM  KNVI WT++V
Sbjct: 229  LRNQEVGEEIHRYVDAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMV 288

Query: 1172 SGYVNCGKLHEARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNRKVKPDKF 993
            SGY + G L EARELFERSP +D+VLWT MING VQF+ FDEAL LF  MQ ++++PD F
Sbjct: 289  SGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNF 348

Query: 992  TVVTLLTGCAQLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRT 813
             +VTLL GCAQ GALEQG+W+HGYI +N++ +D VV TAL+D+YAKCGC++K+LE+F   
Sbjct: 349  ILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEM 408

Query: 812  KKKDTASWTALICGFAMNGQTNKALELFSQMEHCGGKPDDITFIGVLSACSHGGLVEEGC 633
            K++DTASWT++I G A+NG T+KAL+ FSQME  G +PDDITFIGVL+AC+HGGLVEEG 
Sbjct: 409  KERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGR 468

Query: 632  CYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEAERLIDTIPNFSDDVLLPLWSSLLGA 453
             YFDSM +T+KI+PK EHY CL+DL  RAGLLDEAE L++ IP  S D+++PL+ SLL A
Sbjct: 469  RYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSA 528

Query: 452  CRIHRNVHMGERVARRILGMESSNSGIHSLAANLYAAADRWEDVTKVRRKMKDLGIKKTP 273
            CR + N+ M ERV RR+  +E  +S +H+L A++YA+A+RWEDVT VRRKMK+LGI+K P
Sbjct: 529  CRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRWEDVTTVRRKMKELGIRKFP 588

Query: 272  GCSSIEVNGVFHEFLVADSSH 210
            GCSSIEVNGV HEF+V   SH
Sbjct: 589  GCSSIEVNGVLHEFMVGGPSH 609



 Score =  129 bits (325), Expect = 2e-27
 Identities = 88/356 (24%), Positives = 162/356 (45%), Gaps = 32/356 (8%)
 Frame = -1

Query: 1499 IICWNILLSGYTRCRKFSDALLVYRQMEKGNGVRPDEATVVITLSVCIALQNLELGKELH 1320
            ++ +N+++    +   F   L+++ ++ K  G+ PD  T+         L  +  G+++H
Sbjct: 81   LVMYNLMIKAVAKDENFRKVLVLFSELRK-QGLNPDNFTLPPVFKAMGCLGKVVEGEKVH 139

Query: 1319 YYISKELEFTTVLGNALMDMYAKCGSLILARQVFDEMQIKNVISWTTIVSGYVNCGKLHE 1140
             Y+ K   F   + N++M MY   G + +A++VFDE+  ++V+SW  ++S YV   K   
Sbjct: 140  GYVVKS-GFDACVCNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRK--- 195

Query: 1139 ARELFERSPTKDVVLWTTMINGNVQFSHFDEALALFNDMQNR-KVKPDKFTVVTLLTGCA 963
                                        F++A+A+F  M+    +K D+ TVV+ L+ C+
Sbjct: 196  ----------------------------FEDAIAVFRRMRRESNLKADEATVVSTLSACS 227

Query: 962  QLGALEQGRWVHGYIEDNNVVMDVVVSTALIDMYAKCGCMDKSLEIFRRTKKKDTASWTA 783
             L   E G  +H Y+ D  + M   +  AL+DMY KCGC+DK+  IF     K+   WT+
Sbjct: 228  VLRNQEVGEEIHRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTS 286

Query: 782  LICGFAMNGQT-------------------------------NKALELFSQMEHCGGKPD 696
            ++ G+A NG                                 ++AL+LF +M+    +PD
Sbjct: 287  MVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPD 346

Query: 695  DITFIGVLSACSHGGLVEEGCCYFDSMKRTHKIEPKIEHYGCLVDLFGRAGLLDEA 528
            +   + +L  C+  G +E+G  +       + I         LVD++ + G +++A
Sbjct: 347  NFILVTLLKGCAQTGALEQG-KWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKA 401