BLASTX nr result

ID: Coptis25_contig00022257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022257
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524085.1| PREDICTED: uncharacterized protein LOC100814...    87   1e-15
gb|ABA98838.1| transposon protein, putative, Mutator sub-class [...    86   2e-15
gb|AAP03357.1| putative mutator-like transposase [Oryza sativa J...    86   2e-15
ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
gb|AEL30356.1| transposon protein [Arachis hypogaea]                   83   3e-14

>ref|XP_003524085.1| PREDICTED: uncharacterized protein LOC100814876 [Glycine max]
          Length = 1392

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = -3

Query: 316  ESYGKIVELCRQILYSNPGSVVSQGR---HENYMSFMHCCVAFKGCLDGFVRGCRPLIGL 146
            + Y K+ +   ++L SNPGS V        E    F    +   GC  GFV GCRP IGL
Sbjct: 876  KQYAKVFDYAHELLRSNPGSTVKINTVPSPEGPPQFQRLYICLAGCKKGFVAGCRPFIGL 935

Query: 145  DVCFLKGKHGGVCLSIIALDGNNSLFPLAIYICNSENTESWMNFLDIM 2
            D CFLK   GG  LS + LDGNN ++ +A  + + EN ++W  FL ++
Sbjct: 936  DGCFLKSAFGGNLLSAVGLDGNNHIYVIAYAVVDIENKDNWKWFLTLL 983


>gb|ABA98838.1| transposon protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group] gi|108708684|gb|ABF96479.1| transposon
           protein, putative, Mutator sub-class [Oryza sativa
           Japonica Group]
          Length = 895

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = -3

Query: 316 ESYGKIVELCRQILYSNPGSVVSQGR--HENYMSFMHCCVAFKGCLDGFVRGCRPLIGLD 143
           +S+  +     ++L + PGS+V      HE+ + F    +A K C+DGF++GCRP I +D
Sbjct: 432 DSFALLPTFREELLKAQPGSIVDIDTEIHEDQVCFRRLFIALKPCIDGFLQGCRPYIAMD 491

Query: 142 VCFLKGKHGGVCLSIIALDGNNSLFPLAIYICNSENTESWMNFL 11
              L GKH G   + +A+DGNN LFP+A  +  +E TESW  F+
Sbjct: 492 STHLTGKHRGQLAAAVAIDGNNWLFPVAFGVIEAETTESWTWFV 535


>gb|AAP03357.1| putative mutator-like transposase [Oryza sativa Japonica Group]
          Length = 907

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
 Frame = -3

Query: 316 ESYGKIVELCRQILYSNPGSVVSQGR--HENYMSFMHCCVAFKGCLDGFVRGCRPLIGLD 143
           +S+  +     ++L + PGS+V      HE+ + F    +A K C+DGF++GCRP I +D
Sbjct: 444 DSFALLPTFREELLKAQPGSIVDIDTEIHEDQVCFRRLFIALKPCIDGFLQGCRPYIAMD 503

Query: 142 VCFLKGKHGGVCLSIIALDGNNSLFPLAIYICNSENTESWMNFL 11
              L GKH G   + +A+DGNN LFP+A  +  +E TESW  F+
Sbjct: 504 STHLTGKHRGQLAAAVAIDGNNWLFPVAFGVIEAETTESWTWFV 547


>ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|222858024|gb|EEE95571.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/102 (39%), Positives = 58/102 (56%)
 Frame = -3

Query: 316 ESYGKIVELCRQILYSNPGSVVSQGRHENYMSFMHCCVAFKGCLDGFVRGCRPLIGLDVC 137
           E Y  + + C Q+  +NPGS+ S   +     F H  ++F+  + GF+  CRPL+GLD  
Sbjct: 148 EGYRLLPQYCDQVKRTNPGSIASVYGNPTDNCFQHLFISFQASIYGFLNACRPLLGLDRT 207

Query: 136 FLKGKHGGVCLSIIALDGNNSLFPLAIYICNSENTESWMNFL 11
           FLK K+ G        DG+ +LFPLA  + + EN E+WM FL
Sbjct: 208 FLKSKYLGTLFLATGFDGDGALFPLAFGVVDEENDENWMWFL 249


>gb|AEL30356.1| transposon protein [Arachis hypogaea]
          Length = 672

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
 Frame = -3

Query: 310 YGKIVELCRQILYSNPGS-----VVSQGRHENYMSFMHCCVAFKGCLDGFVRGCRPLIGL 146
           YG + +    +L SNPGS     V+ Q   ++   F    V  +GC  GF+  CRPLIGL
Sbjct: 132 YGTVRDYGLTLLKSNPGSTVTVRVIPQPNPDDDPIFEKMYVCLEGCKKGFLASCRPLIGL 191

Query: 145 DVCFLKGKHGGVCLSIIALDGNNSLFPLAIYICNSENTESWMNFLDIM 2
           D  FLK +HGG  LS I  D NN ++ +A  I   ENTE+W  FL+++
Sbjct: 192 DGAFLKTRHGGQILSAIGQDANNHIYVIAYAIVPVENTENWRWFLELL 239


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