BLASTX nr result

ID: Coptis25_contig00022255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022255
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275512.1| PREDICTED: uncharacterized protein LOC100266...   100   1e-19
ref|XP_002511615.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
ref|XP_002327010.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|AFW59286.1| hypothetical protein ZEAMMB73_316447 [Zea mays]         83   3e-14
ref|XP_002446895.1| hypothetical protein SORBIDRAFT_06g024500 [S...    83   3e-14

>ref|XP_002275512.1| PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera]
          Length = 95

 Score =  100 bits (250), Expect = 1e-19
 Identities = 55/95 (57%), Positives = 65/95 (68%)
 Frame = +3

Query: 57  SNHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGAT 236
           + HGSGDG   +WWWALAS  Q   GV +YRRG   +SS   +P KAF VASL VGA A+
Sbjct: 4   NGHGSGDG--SHWWWALASAAQLGWGVFSYRRGGVGDSS--LMPVKAFGVASLFVGAAAS 59

Query: 237 AVAGCLNASGIHKIEDLKVVGRNLRNELRVPPRDT 341
           A  G L+ASGIHK+EDLK +G N+R  L V PR T
Sbjct: 60  AAFGVLHASGIHKVEDLKEMGANIRTGLGVRPRGT 94


>ref|XP_002511615.1| conserved hypothetical protein [Ricinus communis]
           gi|223548795|gb|EEF50284.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/94 (47%), Positives = 59/94 (62%)
 Frame = +3

Query: 54  SSNHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGA 233
           +S  G       +WWWALASTTQ + G+ +YR+G      S  +PFKAF VASL VG+ A
Sbjct: 3   ASESGGDSERRQWWWWALASTTQLLWGISSYRKG--YAGDSRLMPFKAFAVASLFVGSAA 60

Query: 234 TAVAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 335
           +     L ASG+HK+EDL V+G N+R  L +P R
Sbjct: 61  SGSFAALQASGVHKVEDLVVIGTNVRTGLGIPSR 94


>ref|XP_002327010.1| predicted protein [Populus trichocarpa] gi|222835325|gb|EEE73760.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = +3

Query: 63  HGSGDGVE--GYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGAT 236
           +G G G+E   +WWWA+AS  +   G+  Y+RG      S  +P KAF VASL VG+ A+
Sbjct: 3   NGCGGGIETQWWWWWAMASMAKFGWGISAYKRG--FAGDSRLMPLKAFAVASLFVGSAAS 60

Query: 237 AVAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 335
           A    L ASGIHK++DL  +G N+R  L VPPR
Sbjct: 61  ASIASLQASGIHKVQDLIELGANIRTGLGVPPR 93


>gb|AFW59286.1| hypothetical protein ZEAMMB73_316447 [Zea mays]
          Length = 140

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/92 (44%), Positives = 60/92 (65%)
 Frame = +3

Query: 60  NHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGATA 239
           + G G   + + WWA AS  QA  G+  +RRGR    ++  +PFKAF +ASLIVG+GATA
Sbjct: 45  DRGGGGDAKRWPWWAAASAAQAAAGLAWFRRGR--SGTAVAMPFKAFGIASLIVGSGATA 102

Query: 240 VAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 335
           VA  + A+G+  +E++K VG ++R  +  PPR
Sbjct: 103 VAAGVLAAGVGSVEEMKGVGASIRRWMGAPPR 134


>ref|XP_002446895.1| hypothetical protein SORBIDRAFT_06g024500 [Sorghum bicolor]
           gi|241938078|gb|EES11223.1| hypothetical protein
           SORBIDRAFT_06g024500 [Sorghum bicolor]
          Length = 100

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/90 (46%), Positives = 58/90 (64%)
 Frame = +3

Query: 66  GSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGATAVA 245
           G G   E + WWA AS  QA  GV  +RRGR    ++  +PFKAF +ASL VGAGATAV+
Sbjct: 7   GGGGEAERWPWWAAASAAQAAAGVAWFRRGRG--GTAVAMPFKAFAIASLFVGAGATAVS 64

Query: 246 GCLNASGIHKIEDLKVVGRNLRNELRVPPR 335
             + A+G+  +E++K VG ++R  +  PPR
Sbjct: 65  AGVLAAGVGSVEEMKGVGASIRRWMGAPPR 94


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