BLASTX nr result

ID: Coptis25_contig00022246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022246
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513117.1| conserved hypothetical protein [Ricinus comm...   109   7e-22
ref|XP_002268819.1| PREDICTED: uncharacterized protein LOC100256...   107   2e-21
emb|CAN83552.1| hypothetical protein VITISV_027408 [Vitis vinifera]   107   2e-21
ref|XP_002332425.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|XP_003605876.1| IQ domain-containing protein [Medicago trunc...    91   4e-16

>ref|XP_002513117.1| conserved hypothetical protein [Ricinus communis]
           gi|223548128|gb|EEF49620.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 510

 Score =  109 bits (272), Expect = 7e-22
 Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
 Frame = -1

Query: 764 SEANGVNGRLNHWLEESGEAQERKCRISINSNLFVTSSPVQRNVQGRTEHRLGELKHNDL 585
           SE N VNGR  +WLE+  + Q  K +   + +  +TS+P     + R E+R  +LK   L
Sbjct: 317 SERNKVNGRWRYWLEQWVDTQVSKSKELEDLDTVLTSTP-----KPRVEYRGKQLKLRGL 371

Query: 584 L----LAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPK 417
                + G  SP+               ED+    SP++P YM+ATES KA+ RS+S PK
Sbjct: 372 QRQYNIEGLDSPLAAPKRSFHRKQCSLGEDNSFSRSPIVPTYMAATESAKAKARSLSSPK 431

Query: 416 QRQGLVDTYSDHGSPYKDRLIFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPS 237
            R G  D YSD  SP K++L   S  +  ++ VK G+  ++QQRSPSLK L  P  S+ +
Sbjct: 432 LRPGSCDAYSDSYSPCKNKL---SLISSTASEVKLGRPSAYQQRSPSLKNLPGPVKSNRT 488

Query: 236 AKDISINSESS 204
            KD+S +SE S
Sbjct: 489 LKDLSFDSECS 499


>ref|XP_002268819.1| PREDICTED: uncharacterized protein LOC100256816 [Vitis vinifera]
          Length = 469

 Score =  107 bits (268), Expect = 2e-21
 Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
 Frame = -1

Query: 764 SEANGVNGRLNHWLEESGEAQERKCRISINSNLFVTSSPVQRNVQGRTEHRLGELKHNDL 585
           SE N +NGR  +WLE+  + Q  K R  + S   V SS  +   +   +           
Sbjct: 276 SEQNKLNGRWRYWLEKWVDTQVAK-REELPSLDTVWSSNARSREEFPGKQHTPRNNQRQY 334

Query: 584 LLAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQG 405
            + G  SP+             SI D +S  SP +P YM+ATES KA++RS+S PK R G
Sbjct: 335 HIEGLGSPVLVPRRSFHHRKERSIGDENSFSSPPIPTYMAATESAKAKVRSVSSPKLRPG 394

Query: 404 LVDTYSDHGSPYKDRL-IFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPSAKD 228
            +DT+SD  SP+K+RL + SS S++A+   +  K    QQRSPSL+G   P  S  S K+
Sbjct: 395 SLDTFSDSNSPHKNRLSLISSISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRSTKE 453

Query: 227 ISINSESSILN 195
           +S +SE S+LN
Sbjct: 454 LSFDSECSLLN 464


>emb|CAN83552.1| hypothetical protein VITISV_027408 [Vitis vinifera]
          Length = 489

 Score =  107 bits (268), Expect = 2e-21
 Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
 Frame = -1

Query: 764 SEANGVNGRLNHWLEESGEAQERKCRISINSNLFVTSSPVQRNVQGRTEHRLGELKHNDL 585
           SE N +NGR  +WLE+  + Q  K R  + S   V SS  +   +   +           
Sbjct: 296 SEQNKLNGRWRYWLEKWVDTQVAK-REELPSLDTVWSSNARSREEFPGKQHTPRNNQRQY 354

Query: 584 LLAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPKQRQG 405
            + G  SP+             SI D +S  SP +P YM+ATES KA++RS+S PK R G
Sbjct: 355 HIEGLGSPVLVPRRSFHHRKERSIGDENSFSSPPIPTYMAATESAKAKVRSVSSPKLRPG 414

Query: 404 LVDTYSDHGSPYKDRL-IFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIPRNSHPSAKD 228
            +DT+SD  SP+K+RL + SS S++A+   +  K    QQRSPSL+G   P  S  S K+
Sbjct: 415 SLDTFSDSNSPHKNRLSLISSISSEATNCSRISKPGMPQQRSPSLRG-PGPIKSSRSTKE 473

Query: 227 ISINSESSILN 195
           +S +SE S+LN
Sbjct: 474 LSFDSECSLLN 484


>ref|XP_002332425.1| predicted protein [Populus trichocarpa] gi|222832378|gb|EEE70855.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 6/194 (3%)
 Frame = -1

Query: 764 SEANGVNGRLNHWLEESGEAQERKCRISINSNLFVTSSPVQRNVQGRTEHRLGELKHNDL 585
           SE +  +GR  +WL++  + Q  K +   + +  +TS+P     +   E+R  ++K   L
Sbjct: 266 SERSKPSGRWRYWLDQWVDTQLVKSKELEDLDSVLTSNP-----KPGVEYRGKQIKLRGL 320

Query: 584 L----LAGRSSPIXXXXXXXXXXXXXSIEDSDSLGSPVLPNYMSATESVKARLRSISLPK 417
                L    SPI               ED+    SPV+P YM+ TES KA+ RS+S PK
Sbjct: 321 QRLYHLDSVDSPISAPRKSFHRKQCSLGEDNSFSRSPVVPTYMATTESAKAKTRSMSSPK 380

Query: 416 QRQGLVDTYSDHGSPYKDRL-IFSSFSTDASTIVKSGKSPSFQQRSPSLKGLLIP-RNSH 243
            R G  D YSD  SP K++L + SS +T+  +  + G+  ++QQRSPSLKGL  P + + 
Sbjct: 381 LRPGSFDAYSDSYSPCKNKLSLISSTTTEVPSSARYGRPSAYQQRSPSLKGLPGPIKCNR 440

Query: 242 PSAKDISINSESSI 201
           P++K +S +S+ S+
Sbjct: 441 PTSKVLSFDSDCSL 454


>ref|XP_003605876.1| IQ domain-containing protein [Medicago truncatula]
           gi|358344582|ref|XP_003636367.1| IQ domain-containing
           protein [Medicago truncatula]
           gi|355502302|gb|AES83505.1| IQ domain-containing protein
           [Medicago truncatula] gi|355506931|gb|AES88073.1| IQ
           domain-containing protein [Medicago truncatula]
          Length = 436

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 72/194 (37%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
 Frame = -1

Query: 764 SEANGVNGRLNHWLEESGEAQERKCR-ISINSNLFVTSSPVQRNVQGRTEHRLGELKHND 588
           SE + VNGR  +WLE+  + Q  K + +    +++ + S +     GR        + N 
Sbjct: 237 SERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVYSSHSKIGDEFGGRQLKLRSTNRQNP 296

Query: 587 LLLAGRSSPIXXXXXXXXXXXXXSI-EDSDSLGSPVLPNYMSATESVKARLRSISLPKQR 411
             + G  SPI             SI ED     SP  P YM+ATES KA+ RS S PK R
Sbjct: 297 NPIEGLESPILFARNSFPHRRKCSIGEDQSFSSSPATPAYMAATESAKAKARSTSSPKAR 356

Query: 410 QGLVDTYSD-HGSPYKDRLIFSSFSTDASTIVKSGK-SPSFQQRSPSLKGLLIPRNSHPS 237
               D  SD + SP K +L  S  S+  S ++  GK S   QQRSPS KG+ +P  S  +
Sbjct: 357 SWNYDMNSDSYLSPCKKKL--SIVSSVNSEVLNRGKLSGCNQQRSPSFKGISVPIKSSRT 414

Query: 236 AKDISINSESSILN 195
            KD+SINS+SS+ N
Sbjct: 415 IKDLSINSDSSLPN 428


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