BLASTX nr result

ID: Coptis25_contig00022242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022242
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28473.3| unnamed protein product [Vitis vinifera]              198   8e-49
ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256...   198   8e-49
ref|XP_002321206.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_004155141.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   166   3e-39
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c...   166   3e-39

>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  198 bits (504), Expect = 8e-49
 Identities = 83/123 (67%), Positives = 99/123 (80%)
 Frame = -1

Query: 385 LCKVLWTVEADLADGQLLYITGDPISLGCWEPDTAVLMFPTQHTNLWKTEVKVPCGVSFK 206
           LCKV+WT+EADL DGQLLYITGDP  LGCWEPD AVLM PT+HTNLWK EVK+ CG++FK
Sbjct: 86  LCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVLMSPTEHTNLWKAEVKITCGINFK 145

Query: 205 YNYFIKGDKWPSCDLIWRPGPELSVSVPLSRNHNGNIVVRDIWMTVQTERLSVHSWGSWL 26
           YNYF+KGD WPSCD+IW+PGPE S+ VPL    +  I+VRD WMT    R S H WGSW+
Sbjct: 146 YNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKKIMVRDSWMTSNARRPSAHIWGSWM 205

Query: 25  DET 17
           +++
Sbjct: 206 EDS 208


>ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256290 [Vitis vinifera]
          Length = 1019

 Score =  198 bits (504), Expect = 8e-49
 Identities = 83/123 (67%), Positives = 99/123 (80%)
 Frame = -1

Query: 385 LCKVLWTVEADLADGQLLYITGDPISLGCWEPDTAVLMFPTQHTNLWKTEVKVPCGVSFK 206
           LCKV+WT+EADL DGQLLYITGDP  LGCWEPD AVLM PT+HTNLWK EVK+ CG++FK
Sbjct: 86  LCKVIWTIEADLEDGQLLYITGDPNVLGCWEPDMAVLMSPTEHTNLWKAEVKITCGINFK 145

Query: 205 YNYFIKGDKWPSCDLIWRPGPELSVSVPLSRNHNGNIVVRDIWMTVQTERLSVHSWGSWL 26
           YNYF+KGD WPSCD+IW+PGPE S+ VPL    +  I+VRD WMT    R S H WGSW+
Sbjct: 146 YNYFLKGDAWPSCDIIWKPGPEFSLLVPLHGKQDKKIMVRDSWMTSNARRPSAHIWGSWM 205

Query: 25  DET 17
           +++
Sbjct: 206 EDS 208


>ref|XP_002321206.1| predicted protein [Populus trichocarpa] gi|222861979|gb|EEE99521.1|
           predicted protein [Populus trichocarpa]
          Length = 923

 Score =  174 bits (442), Expect = 1e-41
 Identities = 71/122 (58%), Positives = 93/122 (76%)
 Frame = -1

Query: 385 LCKVLWTVEADLADGQLLYITGDPISLGCWEPDTAVLMFPTQHTNLWKTEVKVPCGVSFK 206
           LC+++WTVEADLA GQLLY+TGDP+ LGCW+P+ A+LM P  H NLW+ +V VPCGV+FK
Sbjct: 3   LCELVWTVEADLAPGQLLYVTGDPVVLGCWDPEMAILMHPISHPNLWEAQVTVPCGVNFK 62

Query: 205 YNYFIKGDKWPSCDLIWRPGPELSVSVPLSRNHNGNIVVRDIWMTVQTERLSVHSWGSWL 26
           YNYF++   WPSC++ WRPGPE S+SVP +   +  I+VRD W    TER   + WGSW+
Sbjct: 63  YNYFVRDKTWPSCNVTWRPGPEFSLSVPATVKQDRKIMVRDSWTKFNTERSPDYLWGSWI 122

Query: 25  DE 20
           +E
Sbjct: 123 EE 124


>ref|XP_004155141.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101228180, partial [Cucumis sativus]
          Length = 926

 Score =  166 bits (421), Expect = 3e-39
 Identities = 72/127 (56%), Positives = 93/127 (73%)
 Frame = -1

Query: 385 LCKVLWTVEADLADGQLLYITGDPISLGCWEPDTAVLMFPTQHTNLWKTEVKVPCGVSFK 206
           +CKV+WT+EADL   QLLY+TGDPI+LG WEP+ A+ M PT H NLWK E K+ CG++FK
Sbjct: 6   VCKVVWTIEADLEVDQLLYLTGDPITLGSWEPNMAIQMSPTHHANLWKAEAKITCGINFK 65

Query: 205 YNYFIKGDKWPSCDLIWRPGPELSVSVPLSRNHNGNIVVRDIWMTVQTERLSVHSWGSWL 26
           YNYFIK +  PS D+IWR GPE S+S+P + NH+ +I VRD WM     R SV +W SW+
Sbjct: 66  YNYFIKDEALPSSDIIWRTGPEFSLSLPQTVNHDKHITVRDSWMRFAVTRPSVFTWDSWI 125

Query: 25  DETSVLS 5
           +E  + S
Sbjct: 126 EELPLKS 132


>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
           gi|223536154|gb|EEF37809.1| hypothetical protein
           RCOM_1213430 [Ricinus communis]
          Length = 963

 Score =  166 bits (421), Expect = 3e-39
 Identities = 79/136 (58%), Positives = 101/136 (74%)
 Frame = -1

Query: 424 DFLLDSTTSSPQQLCKVLWTVEADLADGQLLYITGDPISLGCWEPDTAVLMFPTQHTNLW 245
           DF   S T+S + LC V+WTVEADL  GQLLYITG+PISLG W+P+ A+LM PT+H NLW
Sbjct: 7   DFSGRSITTSGE-LCTVVWTVEADLTAGQLLYITGEPISLGGWQPEMALLMCPTEHANLW 65

Query: 244 KTEVKVPCGVSFKYNYFIKGDKWPSCDLIWRPGPELSVSVPLSRNHNGNIVVRDIWMTVQ 65
            TEVK+P GV+ KYN+FIK ++  S DLIWRPGPE S+S+P+ +  +G I+VRD W+   
Sbjct: 66  TTEVKIPSGVNLKYNFFIKEERPASADLIWRPGPEFSLSIPVKQ--DGKIIVRDSWLKNN 123

Query: 64  TERLSVHSWGSWLDET 17
            ER   + WGSW+ ET
Sbjct: 124 IERSPPYVWGSWIGET 139


Top