BLASTX nr result

ID: Coptis25_contig00022223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022223
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270872.1| PREDICTED: uncharacterized protein SYNPCC700...   300   2e-79
tpg|DAA43360.1| TPA: hypothetical protein ZEAMMB73_635178 [Zea m...   287   1e-75
ref|NP_001143018.1| uncharacterized protein LOC100275482 [Zea ma...   287   1e-75
gb|AFK45801.1| unknown [Medicago truncatula]                          286   2e-75
ref|NP_196064.2| uncharacterized protein [Arabidopsis thaliana] ...   286   3e-75

>ref|XP_002270872.1| PREDICTED: uncharacterized protein SYNPCC7002_A1590 [Vitis
           vinifera] gi|296085939|emb|CBI31380.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  300 bits (768), Expect = 2e-79
 Identities = 162/241 (67%), Positives = 187/241 (77%), Gaps = 18/241 (7%)
 Frame = -1

Query: 670 TIPITS--------RNHRSSNPLKKVLCISAVSSS---------SPKARFIAKRTESVTV 542
           T P+T+        +N RSS  +K +L     SS          +PKARF+A+R ESV+V
Sbjct: 4   TFPLTNLRSICFHRQNPRSSLNVKHILFSYNESSKPSFRISADLAPKARFVARRRESVSV 63

Query: 541 QQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRCYVYTFKFFAFEVCPVLLVRVEEHP 362
           +QL+RPL+EYMSLPASQYSVLDAERIERVD+NTFRCYVY F+FFAFEVCPVL+V+VEE P
Sbjct: 64  KQLERPLVEYMSLPASQYSVLDAERIERVDDNTFRCYVYRFRFFAFEVCPVLMVKVEEQP 123

Query: 361 NGCCIRLLSCKLEGSPMVVAQNEKFSGVLRY*FGVGNAASMVNQISCSNERMNS-VQQLT 185
           NGCCIRLLSCKLEGSP+VVAQNEKF             ASMVN+ISC + + NS VQQLT
Sbjct: 124 NGCCIRLLSCKLEGSPVVVAQNEKFH------------ASMVNKISCDSNQSNSLVQQLT 171

Query: 184 SDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILRIMLPRFMSQLVKDYQAWATGDMSR 5
           SDT+IEV ID+PF F  IPVEAIESTG QVLEQILRIMLPRFM+QLVKDYQ+WA+GD SR
Sbjct: 172 SDTVIEVIIDIPFPFRAIPVEAIESTGAQVLEQILRIMLPRFMAQLVKDYQSWASGDASR 231

Query: 4   Q 2
           Q
Sbjct: 232 Q 232


>tpg|DAA43360.1| TPA: hypothetical protein ZEAMMB73_635178 [Zea mays]
          Length = 231

 Score =  287 bits (735), Expect = 1e-75
 Identities = 149/205 (72%), Positives = 172/205 (83%), Gaps = 3/205 (1%)
 Frame = -1

Query: 607 SAVSSSS--PKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRC 434
           SAVSSSS  PKARF+A+R+ESV VQQL RPL EYMSLPASQYSVLDAERIERVD++TFRC
Sbjct: 32  SAVSSSSSAPKARFVARRSESVPVQQLVRPLAEYMSLPASQYSVLDAERIERVDDSTFRC 91

Query: 433 YVYTFKFFAFEVCPVLLVRVEEHPNGCCIRLLSCKLEGSPMVVAQNEKFSGVLRY*FGVG 254
           YVY F+FFA EVCPVLLVRV+E P+GCCIRLLSCKLEGSP+V AQN+KFS          
Sbjct: 92  YVYRFRFFALEVCPVLLVRVDEEPDGCCIRLLSCKLEGSPLVEAQNDKFS---------- 141

Query: 253 NAASMVNQISCSNERMNS-VQQLTSDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILR 77
             ASM N++ CS++  +S +QQLTSDT IEV ID+PF F  IPVEAIES+GRQVLEQ+LR
Sbjct: 142 --ASMANRVFCSSKSQDSTLQQLTSDTTIEVAIDIPFPFRAIPVEAIESSGRQVLEQLLR 199

Query: 76  IMLPRFMSQLVKDYQAWATGDMSRQ 2
           +MLPRF+ QLVKDYQAWA+GD SR+
Sbjct: 200 VMLPRFLKQLVKDYQAWASGDASRK 224


>ref|NP_001143018.1| uncharacterized protein LOC100275482 [Zea mays]
           gi|195613014|gb|ACG28337.1| hypothetical protein [Zea
           mays]
          Length = 233

 Score =  287 bits (735), Expect = 1e-75
 Identities = 149/205 (72%), Positives = 171/205 (83%), Gaps = 3/205 (1%)
 Frame = -1

Query: 607 SAVSSSS--PKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRC 434
           SAVSSSS  PKARF+A+R+ESV VQQL RPL EYMSLPASQYSVLDAERIERVD++TFRC
Sbjct: 34  SAVSSSSSAPKARFVARRSESVPVQQLVRPLAEYMSLPASQYSVLDAERIERVDDSTFRC 93

Query: 433 YVYTFKFFAFEVCPVLLVRVEEHPNGCCIRLLSCKLEGSPMVVAQNEKFSGVLRY*FGVG 254
           YVY F+FFA EVCPVLLVRV+E PNGCCI LLSCKLEGSP+V AQN+KFS          
Sbjct: 94  YVYRFRFFALEVCPVLLVRVDEEPNGCCIHLLSCKLEGSPLVEAQNDKFS---------- 143

Query: 253 NAASMVNQISCSNERMNS-VQQLTSDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILR 77
             ASM N++ CS++  +S +QQLTSDT IEV ID+PF F  IPVEAIES+GRQVLEQ+LR
Sbjct: 144 --ASMANRVFCSSKSQDSTLQQLTSDTTIEVAIDIPFPFRAIPVEAIESSGRQVLEQLLR 201

Query: 76  IMLPRFMSQLVKDYQAWATGDMSRQ 2
           +MLPRF+ QLVKDYQAWA+GD SR+
Sbjct: 202 VMLPRFLKQLVKDYQAWASGDASRK 226


>gb|AFK45801.1| unknown [Medicago truncatula]
          Length = 226

 Score =  286 bits (733), Expect = 2e-75
 Identities = 151/220 (68%), Positives = 174/220 (79%), Gaps = 1/220 (0%)
 Frame = -1

Query: 658 TSRNHRSSNPLKKVLCISAVSSSSPKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVL 479
           TSR H+    L   L  SA   S+ KARF+A+R ESV+VQQLQRPLIEYM LPASQYSVL
Sbjct: 14  TSRCHQLKQRLP--LLASATPPSTHKARFVARRKESVSVQQLQRPLIEYMRLPASQYSVL 71

Query: 478 DAERIERVDENTFRCYVYTFKFFAFEVCPVLLVRVEEHPNGCCIRLLSCKLEGSPMVVAQ 299
           DAERIERV E+TFRCYVYT KFF FEVCPVLLV+VE+ PNGCCI+LLSCKL+GSPMV AQ
Sbjct: 72  DAERIERVSEDTFRCYVYTIKFFTFEVCPVLLVKVEQQPNGCCIKLLSCKLQGSPMVAAQ 131

Query: 298 NEKFSGVLRY*FGVGNAASMVNQISCSNERMNS-VQQLTSDTLIEVTIDVPFAFLPIPVE 122
           N+KF  +            MVN+ISC ++   S VQQLTSDT+IEV+I++PFAF  IP +
Sbjct: 132 NDKFDAI------------MVNRISCESDSDKSLVQQLTSDTIIEVSIEIPFAFKAIPKQ 179

Query: 121 AIESTGRQVLEQILRIMLPRFMSQLVKDYQAWATGDMSRQ 2
           AIES G QVLEQIL+IMLPRFMSQLVKDYQAWA+G+ SRQ
Sbjct: 180 AIESAGTQVLEQILKIMLPRFMSQLVKDYQAWASGNASRQ 219


>ref|NP_196064.2| uncharacterized protein [Arabidopsis thaliana]
           gi|63147366|gb|AAY34156.1| At5g04440 [Arabidopsis
           thaliana] gi|87116598|gb|ABD19663.1| At5g04440
           [Arabidopsis thaliana] gi|332003362|gb|AED90745.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 255

 Score =  286 bits (732), Expect = 3e-75
 Identities = 146/204 (71%), Positives = 170/204 (83%), Gaps = 1/204 (0%)
 Frame = -1

Query: 610 ISAVSSSSPKARFIAKRTESVTVQQLQRPLIEYMSLPASQYSVLDAERIERVDENTFRCY 431
           I   SSS+PKARFIA++ +SV+V+QLQRPLIEYMSLPASQYSVLDAERIERVD+NTFRCY
Sbjct: 57  IRVSSSSTPKARFIARQKQSVSVRQLQRPLIEYMSLPASQYSVLDAERIERVDDNTFRCY 116

Query: 430 VYTFKFFAFEVCPVLLVRVEEHPNGCCIRLLSCKLEGSPMVVAQNEKFSGVLRY*FGVGN 251
           VYTFKFF FEVCPVLLVRVEE PNGCCI+LLSCKLEGSP+VVAQN+KF            
Sbjct: 117 VYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSCKLEGSPVVVAQNDKFD----------- 165

Query: 250 AASMVNQISC-SNERMNSVQQLTSDTLIEVTIDVPFAFLPIPVEAIESTGRQVLEQILRI 74
            ASMVN++SC S +  +S QQ+TSD +IEV I++PFAF   PV AIE+TG QVL+QIL++
Sbjct: 166 -ASMVNRVSCDSTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGAIEATGTQVLDQILKL 224

Query: 73  MLPRFMSQLVKDYQAWATGDMSRQ 2
           MLPRF+SQL KDY AWA+GD SRQ
Sbjct: 225 MLPRFLSQLSKDYHAWASGDTSRQ 248


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