BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022210
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   195   4e-48
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   193   1e-47
emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]   193   1e-47
ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46

>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  195 bits (495), Expect = 4e-48
 Identities = 99/142 (69%), Positives = 111/142 (78%)
 Frame = +1

Query: 7   LIFKDVYCLDADGSLFDAALLSAVAAFSHLHIPAVSVNDDGRXXXXXXXXXXXXXXXXPF 186
           + + D+YCLDADGSLFDAALLSA AAFSHL IP V++NDDG+                P 
Sbjct: 149 MAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPV 208

Query: 187 NQSTRKLKLSCMPFSLTCILHKKHILADPTGEEESVMESFVTVVLDLSGQLVSFNKPGGP 366
           N+  RKLKL+ +PFSLTC+LHKK+ILADPT EEESVME+ VTVVLD SGQLVSF KPGG 
Sbjct: 209 NKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGS 268

Query: 367 VLAYTSAVQDCIALTRQRVKEL 432
           VLAYTSAVQDCIALTRQR KEL
Sbjct: 269 VLAYTSAVQDCIALTRQRSKEL 290


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  193 bits (490), Expect = 1e-47
 Identities = 98/142 (69%), Positives = 110/142 (77%)
 Frame = +1

Query: 7   LIFKDVYCLDADGSLFDAALLSAVAAFSHLHIPAVSVNDDGRXXXXXXXXXXXXXXXXPF 186
           + + D+YCLDADGSLFDAALL+AVAAFSHL IP VS+N++GR                P 
Sbjct: 156 MAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPV 215

Query: 187 NQSTRKLKLSCMPFSLTCILHKKHILADPTGEEESVMESFVTVVLDLSGQLVSFNKPGGP 366
           N+  RKL LS +PFSLTCILHK +ILADPT EEES+ME+ VTVVLD SGQLVS  KPGGP
Sbjct: 216 NKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGP 275

Query: 367 VLAYTSAVQDCIALTRQRVKEL 432
           VLAY SAVQDCIALTRQRVKEL
Sbjct: 276 VLAYASAVQDCIALTRQRVKEL 297


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  193 bits (490), Expect = 1e-47
 Identities = 98/142 (69%), Positives = 110/142 (77%)
 Frame = +1

Query: 7   LIFKDVYCLDADGSLFDAALLSAVAAFSHLHIPAVSVNDDGRXXXXXXXXXXXXXXXXPF 186
           + + D+YCLDADGSLFDAALL+AVAAFSHL IP VS+N++GR                P 
Sbjct: 148 MAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPV 207

Query: 187 NQSTRKLKLSCMPFSLTCILHKKHILADPTGEEESVMESFVTVVLDLSGQLVSFNKPGGP 366
           N+  RKL LS +PFSLTCILHK +ILADPT EEES+ME+ VTVVLD SGQLVS  KPGGP
Sbjct: 208 NKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGP 267

Query: 367 VLAYTSAVQDCIALTRQRVKEL 432
           VLAY SAVQDCIALTRQRVKEL
Sbjct: 268 VLAYASAVQDCIALTRQRVKEL 289


>emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]
          Length = 1621

 Score =  193 bits (490), Expect = 1e-47
 Identities = 98/142 (69%), Positives = 110/142 (77%)
 Frame = +1

Query: 7   LIFKDVYCLDADGSLFDAALLSAVAAFSHLHIPAVSVNDDGRXXXXXXXXXXXXXXXXPF 186
           + + D+YCLDADGSLFDAALL+AVAAFSHL IP VS+N++GR                P 
Sbjct: 149 MAYLDIYCLDADGSLFDAALLAAVAAFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPV 208

Query: 187 NQSTRKLKLSCMPFSLTCILHKKHILADPTGEEESVMESFVTVVLDLSGQLVSFNKPGGP 366
           N+  RKL LS +PFSLTCILHK +ILADPT EEES+ME+ VTVVLD SGQLVS  KPGGP
Sbjct: 209 NKGKRKLTLSSLPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGP 268

Query: 367 VLAYTSAVQDCIALTRQRVKEL 432
           VLAY SAVQDCIALTRQRVKEL
Sbjct: 269 VLAYASAVQDCIALTRQRVKEL 290


>ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|222867347|gb|EEF04478.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  188 bits (477), Expect = 4e-46
 Identities = 95/142 (66%), Positives = 109/142 (76%)
 Frame = +1

Query: 7   LIFKDVYCLDADGSLFDAALLSAVAAFSHLHIPAVSVNDDGRXXXXXXXXXXXXXXXXPF 186
           + + D+YCLDADG+LFDAALLSAVAAFSHL IP VS+NDDG+                P 
Sbjct: 168 MAYLDIYCLDADGALFDAALLSAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPV 227

Query: 187 NQSTRKLKLSCMPFSLTCILHKKHILADPTGEEESVMESFVTVVLDLSGQLVSFNKPGGP 366
           N+  RKL LS +PFSLTCILHK +ILADPT EEES+ME+ VTVVLD S +LVSF KPGG 
Sbjct: 228 NKEKRKLTLSSIPFSLTCILHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGS 287

Query: 367 VLAYTSAVQDCIALTRQRVKEL 432
           V AYTSAV+DC+ALTRQRVKEL
Sbjct: 288 VFAYTSAVKDCVALTRQRVKEL 309