BLASTX nr result
ID: Coptis25_contig00022198
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022198 (259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 62 4e-08 ref|XP_003627212.1| Midasin [Medicago truncatula] gi|355521234|g... 58 7e-07 ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera] Length = 5286 Score = 62.4 bits (150), Expect = 4e-08 Identities = 36/88 (40%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = +2 Query: 2 YTIPIMGCFRPMVRDIVDKTXXXXXXXXXXXXRSDNDLSKMDIXXXXXXXXXXXXXG--F 175 YTIP+MGCFRP+ R IVDK S+ L++++ G Sbjct: 57 YTIPMMGCFRPICRKIVDKAVALLRLVPNLRYNSNGTLTEVEEDKLLGEAGNFEDAGDAS 116 Query: 176 VMDAFVTSGRGLQLHEAACLAFSRALDL 259 V++ F +G GL LHE ACLAF RALDL Sbjct: 117 VIEFFARNGWGLNLHELACLAFCRALDL 144 >ref|XP_003627212.1| Midasin [Medicago truncatula] gi|355521234|gb|AET01688.1| Midasin [Medicago truncatula] Length = 494 Score = 58.2 bits (139), Expect = 7e-07 Identities = 33/86 (38%), Positives = 42/86 (48%) Frame = +2 Query: 2 YTIPIMGCFRPMVRDIVDKTXXXXXXXXXXXXRSDNDLSKMDIXXXXXXXXXXXXXGFVM 181 YTIP+MGCFR + R VDK + +D ++D V+ Sbjct: 57 YTIPLMGCFRAIARKFVDKAVALLRLVPNLRSNTVDDAMEIDADIVLDDVAN------VV 110 Query: 182 DAFVTSGRGLQLHEAACLAFSRALDL 259 + +V GRGL LHE CLAF RALDL Sbjct: 111 EYYVEQGRGLDLHEHVCLAFCRALDL 136 >ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1| predicted protein [Populus trichocarpa] Length = 5317 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/86 (38%), Positives = 45/86 (52%) Frame = +2 Query: 2 YTIPIMGCFRPMVRDIVDKTXXXXXXXXXXXXRSDNDLSKMDIXXXXXXXXXXXXXGFVM 181 YTIP++G FRP+ R IVD+ D + + +D +V+ Sbjct: 57 YTIPLIGSFRPVARKIVDQAVALLRNCNLSSDSDDIEGNFVDADVL-----------YVI 105 Query: 182 DAFVTSGRGLQLHEAACLAFSRALDL 259 + + SGRGL+LHE ACLAF RALDL Sbjct: 106 EHYERSGRGLELHELACLAFCRALDL 131