BLASTX nr result

ID: Coptis25_contig00022190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022190
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   102   2e-20
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus c...   102   2e-20

>ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  104 bits (260), Expect = 6e-21
 Identities = 44/76 (57%), Positives = 63/76 (82%)
 Frame = +3

Query: 3   IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182
           IDIIKC+++FF ++ +LAV+YL+NL +VPRFD+LIMCL +TDK+DL +MW+E F S A P
Sbjct: 395 IDIIKCVSSFFIDDMDLAVKYLENLTEVPRFDILIMCLPSTDKADLLKMWDEVFCSEATP 454

Query: 183 VEFVETLGKLRMKYCP 230
           +++ E L K+R +YCP
Sbjct: 455 IKYAEILDKMRSRYCP 470


>ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|222871711|gb|EEF08842.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/76 (60%), Positives = 60/76 (78%)
 Frame = +3

Query: 3   IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182
           IDIIKC+A+FF ++ + AV+YL+NL KVPRFD+LIMCLS+TD SDL +MW+  F S + P
Sbjct: 357 IDIIKCVASFFIDDMDFAVKYLENLTKVPRFDMLIMCLSSTDTSDLLKMWDGVFCSASTP 416

Query: 183 VEFVETLGKLRMKYCP 230
           +E+ E L  LR KYCP
Sbjct: 417 IEYAEILDNLRSKYCP 432


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/75 (61%), Positives = 61/75 (81%)
 Frame = +3

Query: 3   IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182
           IDIIKCIATFF  E +LAV++LDNL K+ RFD++IMCLS+TDK+DL ++W+E F + A P
Sbjct: 397 IDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCLSSTDKTDLLKIWDEVFCNKATP 456

Query: 183 VEFVETLGKLRMKYC 227
             + +TLGKLR +YC
Sbjct: 457 SGYADTLGKLRPRYC 471


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  102 bits (255), Expect = 2e-20
 Identities = 46/75 (61%), Positives = 61/75 (81%)
 Frame = +3

Query: 3    IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182
            IDIIKCIATFF  E +LAV++LDNL K+ RFD++IMCLS+TDK+DL ++W+E F + A P
Sbjct: 1020 IDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCLSSTDKTDLLKIWDEVFCNKATP 1079

Query: 183  VEFVETLGKLRMKYC 227
              + +TLGKLR +YC
Sbjct: 1080 SGYADTLGKLRPRYC 1094


>ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus communis]
           gi|223548474|gb|EEF49965.1| hypothetical protein
           RCOM_1435290 [Ricinus communis]
          Length = 237

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = +3

Query: 3   IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182
           IDIIKC+ATFF ++  LAV+YL NLA+VPRF++LIMCLSA DK+DL ++W+E F S A P
Sbjct: 161 IDIIKCVATFFVDDMNLAVKYLQNLAQVPRFNILIMCLSAADKADLLKLWDEVFCSEATP 220

Query: 183 VEFVETLGKLRMKYC 227
           +E  E L  LR KYC
Sbjct: 221 IEHAEILDNLRTKYC 235


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