BLASTX nr result
ID: Coptis25_contig00022190
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022190 (246 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|2... 104 6e-21 ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20 ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot... 102 2e-20 emb|CBI39598.3| unnamed protein product [Vitis vinifera] 102 2e-20 ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus c... 102 2e-20 >ref|XP_002318949.1| predicted protein [Populus trichocarpa] gi|222857325|gb|EEE94872.1| predicted protein [Populus trichocarpa] Length = 471 Score = 104 bits (260), Expect = 6e-21 Identities = 44/76 (57%), Positives = 63/76 (82%) Frame = +3 Query: 3 IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182 IDIIKC+++FF ++ +LAV+YL+NL +VPRFD+LIMCL +TDK+DL +MW+E F S A P Sbjct: 395 IDIIKCVSSFFIDDMDLAVKYLENLTEVPRFDILIMCLPSTDKADLLKMWDEVFCSEATP 454 Query: 183 VEFVETLGKLRMKYCP 230 +++ E L K+R +YCP Sbjct: 455 IKYAEILDKMRSRYCP 470 >ref|XP_002330255.1| predicted protein [Populus trichocarpa] gi|222871711|gb|EEF08842.1| predicted protein [Populus trichocarpa] Length = 434 Score = 103 bits (257), Expect = 1e-20 Identities = 46/76 (60%), Positives = 60/76 (78%) Frame = +3 Query: 3 IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182 IDIIKC+A+FF ++ + AV+YL+NL KVPRFD+LIMCLS+TD SDL +MW+ F S + P Sbjct: 357 IDIIKCVASFFIDDMDFAVKYLENLTKVPRFDMLIMCLSSTDTSDLLKMWDGVFCSASTP 416 Query: 183 VEFVETLGKLRMKYCP 230 +E+ E L LR KYCP Sbjct: 417 IEYAEILDNLRSKYCP 432 >ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis vinifera] Length = 474 Score = 102 bits (255), Expect = 2e-20 Identities = 46/75 (61%), Positives = 61/75 (81%) Frame = +3 Query: 3 IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182 IDIIKCIATFF E +LAV++LDNL K+ RFD++IMCLS+TDK+DL ++W+E F + A P Sbjct: 397 IDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCLSSTDKTDLLKIWDEVFCNKATP 456 Query: 183 VEFVETLGKLRMKYC 227 + +TLGKLR +YC Sbjct: 457 SGYADTLGKLRPRYC 471 >emb|CBI39598.3| unnamed protein product [Vitis vinifera] Length = 1097 Score = 102 bits (255), Expect = 2e-20 Identities = 46/75 (61%), Positives = 61/75 (81%) Frame = +3 Query: 3 IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182 IDIIKCIATFF E +LAV++LDNL K+ RFD++IMCLS+TDK+DL ++W+E F + A P Sbjct: 1020 IDIIKCIATFFVTEMDLAVKFLDNLTKISRFDMIIMCLSSTDKTDLLKIWDEVFCNKATP 1079 Query: 183 VEFVETLGKLRMKYC 227 + +TLGKLR +YC Sbjct: 1080 SGYADTLGKLRPRYC 1094 >ref|XP_002512513.1| hypothetical protein RCOM_1435290 [Ricinus communis] gi|223548474|gb|EEF49965.1| hypothetical protein RCOM_1435290 [Ricinus communis] Length = 237 Score = 102 bits (255), Expect = 2e-20 Identities = 47/75 (62%), Positives = 59/75 (78%) Frame = +3 Query: 3 IDIIKCIATFFREETELAVRYLDNLAKVPRFDLLIMCLSATDKSDLHRMWEENFLSNALP 182 IDIIKC+ATFF ++ LAV+YL NLA+VPRF++LIMCLSA DK+DL ++W+E F S A P Sbjct: 161 IDIIKCVATFFVDDMNLAVKYLQNLAQVPRFNILIMCLSAADKADLLKLWDEVFCSEATP 220 Query: 183 VEFVETLGKLRMKYC 227 +E E L LR KYC Sbjct: 221 IEHAEILDNLRTKYC 235