BLASTX nr result
ID: Coptis25_contig00022187
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022187 (537 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago trunc... 128 5e-28 gb|AFK48868.1| unknown [Lotus japonicus] 127 8e-28 gb|AFK48428.1| unknown [Lotus japonicus] 127 8e-28 ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] i... 127 8e-28 ref|XP_002302712.1| predicted protein [Populus trichocarpa] gi|2... 127 1e-27 >ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula] gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula] Length = 401 Score = 128 bits (322), Expect = 5e-28 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = +3 Query: 15 MASGWGITGNKGRCYDFWIDFSECMSKCREPKDCALLREDYFECLHHAKEYQRRNRIY 188 MASGWGITGNKGRCYDFWIDFSECMS CREPKDC LLREDYFECLHH+KE+QRRNRIY Sbjct: 1 MASGWGITGNKGRCYDFWIDFSECMSTCREPKDCVLLREDYFECLHHSKEFQRRNRIY 58 >gb|AFK48868.1| unknown [Lotus japonicus] Length = 82 Score = 127 bits (320), Expect = 8e-28 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = +3 Query: 15 MASGWGITGNKGRCYDFWIDFSECMSKCREPKDCALLREDYFECLHHAKEYQRRNRIY 188 MASGWGITGNKGRCYDFWIDFSECMS CREPKDCALLREDY ECLHH+KE+QRRNRIY Sbjct: 1 MASGWGITGNKGRCYDFWIDFSECMSTCREPKDCALLREDYLECLHHSKEFQRRNRIY 58 >gb|AFK48428.1| unknown [Lotus japonicus] Length = 82 Score = 127 bits (320), Expect = 8e-28 Identities = 54/58 (93%), Positives = 56/58 (96%) Frame = +3 Query: 15 MASGWGITGNKGRCYDFWIDFSECMSKCREPKDCALLREDYFECLHHAKEYQRRNRIY 188 MASGWGITGNKGRCYDFWIDFSECMS CREPKDCALLREDY ECLHH+KE+QRRNRIY Sbjct: 1 MASGWGITGNKGRCYDFWIDFSECMSTCREPKDCALLREDYLECLHHSKEFQRRNRIY 58 >ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B isoform 1 [Glycine max] gi|356505584|ref|XP_003521570.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B isoform 2 [Glycine max] Length = 82 Score = 127 bits (320), Expect = 8e-28 Identities = 53/58 (91%), Positives = 57/58 (98%) Frame = +3 Query: 15 MASGWGITGNKGRCYDFWIDFSECMSKCREPKDCALLREDYFECLHHAKEYQRRNRIY 188 MASGWGITGNKGRCYDFW+DFSECMS+CREPKDCALLREDY ECLHH+KE+QRRNRIY Sbjct: 1 MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCALLREDYLECLHHSKEFQRRNRIY 58 >ref|XP_002302712.1| predicted protein [Populus trichocarpa] gi|222844438|gb|EEE81985.1| predicted protein [Populus trichocarpa] Length = 86 Score = 127 bits (318), Expect = 1e-27 Identities = 53/58 (91%), Positives = 56/58 (96%) Frame = +3 Query: 15 MASGWGITGNKGRCYDFWIDFSECMSKCREPKDCALLREDYFECLHHAKEYQRRNRIY 188 MASGWGITGNKGRCYDFWIDFSECMS+CREPKDCA LREDY ECLHH+KE+QRRNRIY Sbjct: 1 MASGWGITGNKGRCYDFWIDFSECMSQCREPKDCAFLREDYLECLHHSKEFQRRNRIY 58