BLASTX nr result

ID: Coptis25_contig00022180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022180
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cere...   171   5e-41
ref|XP_004148396.1| PREDICTED: protein cereblon-like [Cucumis sa...   171   5e-41
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...   171   8e-41
ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus c...   169   2e-40

>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/136 (66%), Positives = 107/136 (78%)
 Frame = +2

Query: 116 DDVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQS 295
           DD TF TCL ++ + LGEV+D    + FL GGA+LNLP+FYLEGVV+FPEATL LRV Q 
Sbjct: 52  DDFTFNTCLASLHTYLGEVEDTHHRLAFLDGGAILNLPLFYLEGVVLFPEATLPLRVIQP 111

Query: 296 TFKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTR 475
            F ++VERAL QVDAP T+GVV  ++D DN +L F++VGTT EI QYRRL D SLNV+TR
Sbjct: 112 NFISAVERALVQVDAPYTVGVVRAYRDSDNRRLRFATVGTTAEIRQYRRLEDGSLNVVTR 171

Query: 476 GQQRFRLWHRWIDVEG 523
           GQQRFRL  RWIDVEG
Sbjct: 172 GQQRFRLKRRWIDVEG 187


>ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cereblon-like [Cucumis
           sativus]
          Length = 546

 Score =  171 bits (434), Expect = 5e-41
 Identities = 85/135 (62%), Positives = 104/135 (77%)
 Frame = +2

Query: 119 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 298
           + TF + L ++ + LGEV+DA   + FL GGA+LNLP+FYLEGVV+FPEATL LRV QS 
Sbjct: 58  EFTFNSSLASLHTYLGEVEDAHHRMAFLDGGAILNLPVFYLEGVVLFPEATLPLRVIQSN 117

Query: 299 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 478
           F A++ER L   D PNTIGVVHV  D D+E+L F+++GTT EI Q+RRL D SLNVL RG
Sbjct: 118 FIAAIERVLTHFDTPNTIGVVHVSLDSDSERLRFANIGTTAEIRQFRRLEDGSLNVLARG 177

Query: 479 QQRFRLWHRWIDVEG 523
           +QRFRL  RWIDVEG
Sbjct: 178 KQRFRLRRRWIDVEG 192


>ref|XP_004148396.1| PREDICTED: protein cereblon-like [Cucumis sativus]
          Length = 546

 Score =  171 bits (434), Expect = 5e-41
 Identities = 85/135 (62%), Positives = 104/135 (77%)
 Frame = +2

Query: 119 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 298
           + TF + L ++ + LGEV+DA   + FL GGA+LNLP+FYLEGVV+FPEATL LRV QS 
Sbjct: 58  EFTFNSSLASLHTYLGEVEDAHHRMAFLDGGAILNLPVFYLEGVVLFPEATLPLRVIQSN 117

Query: 299 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 478
           F A++ER L   D PNTIGVVHV  D D+E+L F+++GTT EI Q+RRL D SLNVL RG
Sbjct: 118 FIAAIERVLTHFDTPNTIGVVHVSLDSDSERLRFANIGTTAEIRQFRRLEDGSLNVLARG 177

Query: 479 QQRFRLWHRWIDVEG 523
           +QRFRL  RWIDVEG
Sbjct: 178 KQRFRLRRRWIDVEG 192


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  171 bits (432), Expect = 8e-41
 Identities = 88/138 (63%), Positives = 104/138 (75%), Gaps = 2/138 (1%)
 Frame = +2

Query: 116 DDVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQS 295
           DD TF  CL ++ + LGEV+D    + FL GGAVLNLP+FYLEGVV+FPEATL LRV Q 
Sbjct: 40  DDFTFNPCLASLHTYLGEVEDTHHRLAFLDGGAVLNLPLFYLEGVVLFPEATLPLRVVQP 99

Query: 296 TFKASVERALNQVDAPNTIGVVHVHK--DPDNEKLHFSSVGTTVEILQYRRLGDSSLNVL 469
            F ++VERAL QVD P  +GVV  ++  D DN +L F++VGTT EI QYRRL D SLNV+
Sbjct: 100 NFISAVERALVQVDNPFIVGVVRAYRGSDSDNRQLRFATVGTTAEIRQYRRLEDGSLNVV 159

Query: 470 TRGQQRFRLWHRWIDVEG 523
           TRGQQRF L HRWIDVEG
Sbjct: 160 TRGQQRFHLKHRWIDVEG 177


>ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus communis]
           gi|223544347|gb|EEF45868.1| ATP-dependent peptidase,
           putative [Ricinus communis]
          Length = 550

 Score =  169 bits (429), Expect = 2e-40
 Identities = 85/135 (62%), Positives = 102/135 (75%)
 Frame = +2

Query: 119 DVTFATCLVNMDSNLGEVDDAQKSVPFLAGGAVLNLPMFYLEGVVVFPEATLCLRVTQST 298
           +  F TCL  + + LGEV+D  +   FL GGAVL LP+FYLEGVV+FP A L LRV Q  
Sbjct: 52  EFAFNTCLAPLHTYLGEVEDTHRRFSFLEGGAVLTLPLFYLEGVVLFPGAILPLRVIQPN 111

Query: 299 FKASVERALNQVDAPNTIGVVHVHKDPDNEKLHFSSVGTTVEILQYRRLGDSSLNVLTRG 478
           F ++VERAL QVDAP+TIGVV  ++D DN +L F+++GTT EI QYRRL D SLNV+TRG
Sbjct: 112 FISAVERALTQVDAPHTIGVVRAYRDRDNGRLRFATIGTTAEIRQYRRLEDGSLNVVTRG 171

Query: 479 QQRFRLWHRWIDVEG 523
           QQRFRL  RWIDVEG
Sbjct: 172 QQRFRLRRRWIDVEG 186


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