BLASTX nr result

ID: Coptis25_contig00022167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022167
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
emb|CBI17868.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002529525.1| hypothetical protein RCOM_1716580 [Ricinus c...   121   5e-26
gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]                117   1e-24
ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|33265...   117   1e-24

>ref|XP_002330744.1| predicted protein [Populus trichocarpa] gi|222872520|gb|EEF09651.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  131 bits (329), Expect = 6e-29
 Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
 Frame = -2

Query: 434 NWPRPSEIPWQGKVANVVNLIGTVSMPVQFQVSA-DGKSWAGTILTQESSSSDSLLWIPI 258
           ++PRP EIP+Q KVAN +NLIG + MP+Q QVS+ D K  A T++TQE S     L IPI
Sbjct: 67  DFPRPKEIPFQAKVANSINLIGYIDMPIQTQVSSPDEKFRAATVITQEPSYHSPALRIPI 126

Query: 257 IFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESPQRK 78
           IFEGDLAHIAA HLK+ DFV++ GQL+ DPP F  E    + +QV+VN INF+E S Q K
Sbjct: 127 IFEGDLAHIAASHLKKGDFVYIDGQLSTDPPPFP-EMQDQTQVQVLVNSINFIEGSFQVK 185

Query: 77  ES 72
           +S
Sbjct: 186 KS 187


>emb|CBI17868.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
 Frame = -2

Query: 434 NWPRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQ--ESSSSDSLLWIP 261
           +WPRPSEIPWQ KV N VNLIG V  PVQFQ S+DGK WA T++ Q  +++S    LWIP
Sbjct: 91  DWPRPSEIPWQAKVCNSVNLIGKVHAPVQFQQSSDGKCWAVTVIAQDADAASHSPALWIP 150

Query: 260 IIFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSS 135
           + FEGDLA+IA CHLKE D V+++GQL  DPP   + +  SS
Sbjct: 151 LTFEGDLAYIAVCHLKENDCVYIAGQLITDPPPLDLNQGPSS 192


>ref|XP_002529525.1| hypothetical protein RCOM_1716580 [Ricinus communis]
           gi|223531009|gb|EEF32863.1| hypothetical protein
           RCOM_1716580 [Ricinus communis]
          Length = 218

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
 Frame = -2

Query: 434 NWPRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDS-LLWIPI 258
           +WPRP EIP+Q K +N VNL G VS P+QFQ S D + WA T+++Q   SSDS   WIP+
Sbjct: 52  DWPRPKEIPFQAKASNSVNLTGYVSEPIQFQASPDHRFWAATVISQHHPSSDSPHFWIPV 111

Query: 257 IFEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVEESPQRK 78
           IFEGDLA  AA HLK  D VH++G+L+ D P   +   + + +++MV  INF++ S   K
Sbjct: 112 IFEGDLARAAASHLKINDHVHIAGKLSADAPPIDVTHGQ-AQVRIMVQNINFIQGSFPIK 170

Query: 77  ES 72
           +S
Sbjct: 171 KS 172


>gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]
          Length = 387

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/113 (46%), Positives = 75/113 (66%)
 Frame = -2

Query: 434 NWPRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPII 255
           +WP+PSEIP+Q KVAN VNL+G V  PV F+ S+DGK  A T++  E+S  +S+L IP++
Sbjct: 74  SWPKPSEIPYQAKVANSVNLVGFVQTPVHFEASSDGKYCASTVVAHENSDDNSVLMIPVV 133

Query: 254 FEGDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE 96
           F GDLAH+ ACH+KE D V+V G+ + +P          S   ++   +NFV+
Sbjct: 134 FAGDLAHVVACHVKENDCVYVYGKFSMEPLSCEFMDEYQSCFHIVAENVNFVQ 186


>ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana] gi|332658861|gb|AEE84261.1|
           protein OSB2 [Arabidopsis thaliana]
          Length = 371

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/111 (51%), Positives = 81/111 (72%)
 Frame = -2

Query: 428 PRPSEIPWQGKVANVVNLIGTVSMPVQFQVSADGKSWAGTILTQESSSSDSLLWIPIIFE 249
           PRP+EI ++ +VAN VNLIG V  PVQF+ S+DGK WAGT+++Q S+S  S  WIPIIFE
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 248 GDLAHIAACHLKEKDFVHVSGQLAGDPPQFTMEKSRSSSIQVMVNGINFVE 96
           GDLA  AA ++ + D +HVSG+L  D P   M  ++ +++QV+V  +NF++
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQ-ANVQVLVQNLNFIQ 195


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