BLASTX nr result

ID: Coptis25_contig00022166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022166
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248...   481   e-133
ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cuc...   470   e-130
ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206...   470   e-130
ref|XP_002327169.1| predicted protein [Populus trichocarpa] gi|2...   460   e-127
ref|XP_002510181.1| nucleic acid binding protein, putative [Rici...   456   e-126

>ref|XP_002282947.1| PREDICTED: uncharacterized protein LOC100248940 [Vitis vinifera]
          Length = 444

 Score =  481 bits (1237), Expect = e-133
 Identities = 241/329 (73%), Positives = 273/329 (82%), Gaps = 3/329 (0%)
 Frame = -3

Query: 1113 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 934
            +A  +IDMVRN+ G+Y+AK K+VVVLWDLDNKPPRGPPY AA ALI+LAQ FG +VDISA
Sbjct: 74   SAADEIDMVRNKDGVYTAKRKKVVVLWDLDNKPPRGPPYAAATALIELAQRFGDIVDISA 133

Query: 933  YANRHAFIHLPQWVREERSQRKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 754
            YANRHAF+HLPQWV EER +R+++D LERKG+ TP+EPY+C VCGRKCRTNLDLKKHFKQ
Sbjct: 134  YANRHAFVHLPQWVLEERHERRRMDFLERKGITTPAEPYICGVCGRKCRTNLDLKKHFKQ 193

Query: 753  LHEREREKKLSRMRSLKGKKRQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 574
            LHERER+KKL+RMRSLKGKKRQ+YKE+FISGNTKYEE AR+L++PKVGYGLASELRRAGV
Sbjct: 194  LHERERQKKLNRMRSLKGKKRQRYKEKFISGNTKYEEAARSLITPKVGYGLASELRRAGV 253

Query: 573  FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 394
            FVK VEDKPQ+AD ALKRQMQHSMSRGIDW+ LV+DDSDF+DMLR ARESNL TVVVGD 
Sbjct: 254  FVKTVEDKPQAADWALKRQMQHSMSRGIDWLVLVSDDSDFADMLRRARESNLGTVVVGDW 313

Query: 393  DRALGRSADLWVPWLRVENGEIGEEELFSARTERDEFSHMDNDGGLFSFTEFDEDSDYES 214
             RALGR ADLWVPW  VEN E+ EE+L      R +F   D D GLFS T F+ D     
Sbjct: 314  HRALGRHADLWVPWTGVENREVTEEDLRPRNRRRSDFE--DRDDGLFSVTHFNGDGIGGG 371

Query: 213  DLDQVVDELVGTNSH---VKISAFSEGEE 136
             LD +VDELV   S    V ISAFSEGEE
Sbjct: 372  ILDGLVDELVVNRSECNGVNISAFSEGEE 400


>ref|XP_004172977.1| PREDICTED: uncharacterized LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  470 bits (1209), Expect = e-130
 Identities = 245/384 (63%), Positives = 298/384 (77%), Gaps = 8/384 (2%)
 Frame = -3

Query: 1227 LLHLKSPSPFFSPTVNSLKPDFKTTKR--LHTITCCGSKHAAVTDIDMVRNRQGIYSAKP 1054
            LL   +P  F       +KP F+ + R  +      G+  A+ + IDMVRNR+GI++AK 
Sbjct: 23   LLFSNNPIHFKHRVSVVVKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQ 82

Query: 1053 KRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAFIHLPQWVREERSQ 874
             +VVVLWDLDNKPPRGPPY+AAMAL ++AQ FG VVD+SAYANRHAFIHLPQWV EER +
Sbjct: 83   SKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRE 142

Query: 873  RKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKK 694
            R+Q+DILERKG+ TPSE YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKK
Sbjct: 143  RRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKK 202

Query: 693  RQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQM 514
            RQ+YKERF+SGN KY E AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QM
Sbjct: 203  RQRYKERFVSGNHKYNEAARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQM 262

Query: 513  QHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRSADLWVPWLRVENG 334
            QHSMSRGIDWMFLV+DDSDFS+MLR A+E+NL TVVVGD DRALGR ADLWVPW+ VENG
Sbjct: 263  QHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENG 322

Query: 333  EIGEEELFSAR---TERDEFSHMDNDGGLFSFTEFDEDSDYESDLDQVVDELVGTNSH-- 169
            ++ EE+L   +     RD+     +DG  FS + F  D    SDL+ VV+EL  T++   
Sbjct: 323  DVTEEDLVPKKWRMRRRDKEVDEGDDG--FSVSSFYGDI-AGSDLESVVEELASTSTEFN 379

Query: 168  -VKISAFSEGEEMKRIRGKFGKED 100
             ++ISAFSEGE+ +     + +ED
Sbjct: 380  GLRISAFSEGEDDEEEDDDWVEED 403


>ref|XP_004141389.1| PREDICTED: uncharacterized protein LOC101206044 [Cucumis sativus]
          Length = 420

 Score =  470 bits (1209), Expect = e-130
 Identities = 245/384 (63%), Positives = 298/384 (77%), Gaps = 8/384 (2%)
 Frame = -3

Query: 1227 LLHLKSPSPFFSPTVNSLKPDFKTTKR--LHTITCCGSKHAAVTDIDMVRNRQGIYSAKP 1054
            LL   +P  F       +KP F+ + R  +      G+  A+ + IDMVRNR+GI++AK 
Sbjct: 23   LLFSNNPIHFKHRVSVVVKPTFQASFRWRIRATAENGASSASTSQIDMVRNREGIFTAKQ 82

Query: 1053 KRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAFIHLPQWVREERSQ 874
             +VVVLWDLDNKPPRGPPY+AAMAL ++AQ FG VVD+SAYANRHAFIHLPQWV EER +
Sbjct: 83   SKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRE 142

Query: 873  RKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHEREREKKLSRMRSLKGKK 694
            R+Q+DILERKG+ TPSE YVC VCGRKC+TNLDLKKHFKQLHERER+KKL+RMRSLKGKK
Sbjct: 143  RRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKK 202

Query: 693  RQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVEDKPQSADRALKRQM 514
            RQ+YKERF+SGN KY E AR++++PKVGYGLASELRRAG FVK VEDKPQ+AD ALK+QM
Sbjct: 203  RQRYKERFVSGNHKYNEAARSVITPKVGYGLASELRRAGFFVKTVEDKPQAADWALKKQM 262

Query: 513  QHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRSADLWVPWLRVENG 334
            QHSMSRGIDWMFLV+DDSDFS+MLR A+E+NL TVVVGD DRALGR ADLWVPW+ VENG
Sbjct: 263  QHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENG 322

Query: 333  EIGEEELFSAR---TERDEFSHMDNDGGLFSFTEFDEDSDYESDLDQVVDELVGTNSH-- 169
            ++ EE+L   +     RD+     +DG  FS + F  D    SDL+ VV+EL  T++   
Sbjct: 323  DVTEEDLVPKKWRMRRRDKEVDEGDDG--FSVSSFYGDI-AGSDLESVVEELASTSTEFN 379

Query: 168  -VKISAFSEGEEMKRIRGKFGKED 100
             ++ISAFSEGE+ +     + +ED
Sbjct: 380  GLRISAFSEGEDDEEEDDDWVEED 403


>ref|XP_002327169.1| predicted protein [Populus trichocarpa] gi|222835484|gb|EEE73919.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  460 bits (1184), Expect = e-127
 Identities = 227/323 (70%), Positives = 270/323 (83%), Gaps = 4/323 (1%)
 Frame = -3

Query: 1092 MVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISAYANRHAF 913
            MV+NRQGIY++K  +VVVLWDLDNKPPRGPPY AAMAL  +AQ FG V+D+ AYANRHAF
Sbjct: 1    MVKNRQGIYTSKQNKVVVLWDLDNKPPRGPPYPAAMALKTVAQRFGEVIDMCAYANRHAF 60

Query: 912  IHLPQWVREERSQRKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQLHERERE 733
            IHLP WV EER +RK +DILERK +++PS+PYVC VCGRKC+TNLDLKKHFKQLHERER+
Sbjct: 61   IHLPHWVLEERRERKHLDILERKEIVSPSQPYVCGVCGRKCKTNLDLKKHFKQLHERERQ 120

Query: 732  KKLSRMRSLKGKKRQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGVFVKMVED 553
            KK++RMRSLKGKKRQ+YKERF+SGN KY E AR LL+PK+GYGLA+EL+RAGV+VK VED
Sbjct: 121  KKVNRMRSLKGKKRQRYKERFVSGNHKYNEEARRLLTPKIGYGLAAELKRAGVYVKTVED 180

Query: 552  KPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDSDRALGRS 373
            KPQ+AD ALKRQ++HSMSRG+DW+ LV+DDSDFS++LR ARE+NL TVVVGD DRALGR 
Sbjct: 181  KPQAADWALKRQIEHSMSRGVDWLVLVSDDSDFSEILRKAREANLGTVVVGDRDRALGRH 240

Query: 372  ADLWVPWLRVENGEIGEEELFSARTERDEFSHMDNDGGLFSFTEFDEDSDY-ESDLDQVV 196
            ADLWVPW+ VENGE+ E++L      R E   ++ND GLFS T+FDED DY  +DL+  V
Sbjct: 241  ADLWVPWIGVENGELTEKDLVPKGRWRSE--DLENDEGLFSVTDFDEDGDYGGNDLEGFV 298

Query: 195  DELVGTNS---HVKISAFSEGEE 136
            D LV   S     +ISAFSEGEE
Sbjct: 299  DGLVMARSGFNGTRISAFSEGEE 321


>ref|XP_002510181.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223550882|gb|EEF52368.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 413

 Score =  456 bits (1173), Expect = e-126
 Identities = 220/334 (65%), Positives = 273/334 (81%), Gaps = 6/334 (1%)
 Frame = -3

Query: 1113 AAVTDIDMVRNRQGIYSAKPKRVVVLWDLDNKPPRGPPYQAAMALIQLAQCFGHVVDISA 934
            A+ ++IDMV NRQG+Y++K  +VVVLWDLDNKPPRGPPY AA+AL  LAQ FG ++++SA
Sbjct: 61   ASTSEIDMVPNRQGVYTSKKSKVVVLWDLDNKPPRGPPYLAALALKNLAQKFGEIIEMSA 120

Query: 933  YANRHAFIHLPQWVREERSQRKQVDILERKGMITPSEPYVCNVCGRKCRTNLDLKKHFKQ 754
            YANRHAFIHLP WV +ER +RKQ+DILERKG++  ++PY+C VCGRKC+TN++LKKHFKQ
Sbjct: 121  YANRHAFIHLPNWVLQERRERKQLDILERKGLVNQTDPYICGVCGRKCKTNMELKKHFKQ 180

Query: 753  LHEREREKKLSRMRSLKGKKRQKYKERFISGNTKYEEGARNLLSPKVGYGLASELRRAGV 574
            LHERER+KKL+RMRSLKGKKRQ++KERFISGN KY E A+ LL+PKVGYGLA EL+RAGV
Sbjct: 181  LHERERQKKLNRMRSLKGKKRQRFKERFISGNHKYNEEAKKLLTPKVGYGLAQELKRAGV 240

Query: 573  FVKMVEDKPQSADRALKRQMQHSMSRGIDWMFLVTDDSDFSDMLRSARESNLQTVVVGDS 394
            +VK V+DKPQ+AD ALKRQ++HSMSRG+DW+FL++DDSDFSD+LR ARE+NL TVVVGD 
Sbjct: 241  YVKTVQDKPQAADWALKRQIEHSMSRGVDWLFLISDDSDFSDILRRAREANLGTVVVGDR 300

Query: 393  DRALGRSADLWVPWLRVENGEIGEEEL-FSARTERDEFSHMDNDGGLFSFTEFDED--SD 223
            DRALGR ADLWVPW+ VENGE+ E +L   +R E + F   D   G FS T FD +    
Sbjct: 301  DRALGRHADLWVPWIGVENGEVTENDLVLKSRIESENF---DGKDGFFSITHFDGEIGGV 357

Query: 222  YESDLDQVVDELVGTNSH---VKISAFSEGEEMK 130
             E D+D V++EL G +S     ++S FSEGEE K
Sbjct: 358  VEGDMDGVIEELAGVSSEWDSARVSVFSEGEEEK 391


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