BLASTX nr result

ID: Coptis25_contig00022163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022163
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306777.1| copalyl diphosphate synthase [Populus tricho...    77   1e-12
ref|XP_002302110.1| copalyl diphosphate synthase [Populus tricho...    76   3e-12
dbj|BAA95612.1| copalyl diphosphate [Croton sublyratus]                70   2e-10
ref|XP_003553463.1| PREDICTED: ent-copalyl diphosphate synthase,...    67   2e-09
dbj|BAB12440.1| copalyldiphosphate synthase No1 [Lactuca sativa]       67   2e-09

>ref|XP_002306777.1| copalyl diphosphate synthase [Populus trichocarpa]
           gi|222856226|gb|EEE93773.1| copalyl diphosphate synthase
           [Populus trichocarpa]
          Length = 807

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 7/82 (8%)
 Frame = -3

Query: 312 KRKVETNGA------STNGPATLSIDSDMQELVQTVLQN-SDGISSKIKQTFLTVAKSCF 154
           K KV  NG+      +T+   T  I+SDMQELVQ V+QN SDGI S IKQTFL VAKS +
Sbjct: 725 KNKVHYNGSYSTITSNTDRITTPQIESDMQELVQLVVQNPSDGIDSNIKQTFLQVAKSFY 784

Query: 153 YTVYCPQETMDHHISEVLFKRV 88
           Y+  C   T+++HI++VLF+RV
Sbjct: 785 YSAICDPGTINYHIAKVLFERV 806


>ref|XP_002302110.1| copalyl diphosphate synthase [Populus trichocarpa]
           gi|222843836|gb|EEE81383.1| copalyl diphosphate synthase
           [Populus trichocarpa]
          Length = 795

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%)
 Frame = -3

Query: 312 KRKVETNGA------STNGPATLSIDSDMQELVQTVLQN-SDGISSKIKQTFLTVAKSCF 154
           K KV  NG+      ST+   T  I+SDMQEL+Q V+Q  SDGI  KIKQTFL VAKS +
Sbjct: 713 KNKVHDNGSYSTITGSTDRITTPQIESDMQELMQLVIQKTSDGIDPKIKQTFLQVAKSFY 772

Query: 153 YTVYCPQETMDHHISEVLFKRV 88
           YT +C   T+++HI++VLF+ V
Sbjct: 773 YTAFCDPGTINYHIAKVLFETV 794


>dbj|BAA95612.1| copalyl diphosphate [Croton sublyratus]
          Length = 829

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -3

Query: 267 TLSIDSDMQELVQTVLQNS-DGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVLFKR 91
           T  I+S MQEL Q VLQNS DG+ S IKQTF TV KS +YT  C   T ++H+S+VLF+R
Sbjct: 768 TPEIESSMQELAQLVLQNSSDGLDSNIKQTFFTVVKSIYYTTVCDLGTTNYHMSKVLFER 827

Query: 90  V 88
           V
Sbjct: 828 V 828


>ref|XP_003553463.1| PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like
           [Glycine max]
          Length = 816

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -3

Query: 291 GASTNGPATLSIDSDMQELVQTVLQNSD-GISSKIKQTFLTVAKSCFYTVYCPQETMDHH 115
           G + N   T   +S MQELVQ V Q S  GI   IK TFLTVAKS +YT +C   T++ H
Sbjct: 747 GTNVNSMITQEEESKMQELVQLVYQKSPTGIDFNIKNTFLTVAKSFYYTAFCDSRTVNFH 806

Query: 114 ISEVLFKRVV 85
           I++VLF +VV
Sbjct: 807 IAKVLFDKVV 816


>dbj|BAB12440.1| copalyldiphosphate synthase No1 [Lactuca sativa]
          Length = 799

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/60 (55%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = -3

Query: 261 SIDSDMQELVQTVLQNS-DGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVLFKRVV 85
           SIDS MQELVQ VL +S D +   +KQTFLTVAK+ +Y  YC  ET++ HIS+V+F+ ++
Sbjct: 740 SIDSKMQELVQLVLSDSLDDLDQDLKQTFLTVAKTFYYKAYCDPETINVHISKVMFETII 799


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