BLASTX nr result

ID: Coptis25_contig00022159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022159
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535833.1| PREDICTED: ABC transporter G family member 2...   432   e-118
ref|XP_003519092.1| PREDICTED: ABC transporter G family member 2...   431   e-118
ref|XP_003553629.1| PREDICTED: ABC transporter G family member 2...   430   e-118
emb|CBI39105.3| unnamed protein product [Vitis vinifera]              429   e-118
ref|XP_002322764.1| white-brown-complex ABC transporter family [...   427   e-117

>ref|XP_003535833.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 738

 Score =  432 bits (1110), Expect = e-118
 Identities = 242/363 (66%), Positives = 268/363 (73%), Gaps = 9/363 (2%)
 Frame = +1

Query: 61   METPTSGLARTQSDQL---DIAIRKSPSRTFLNEADSGVSLSRKSSFGKRMPSPGR---K 222
            ME   + L RT+SDQL    +A  KSP  +  + + +GV  SRKSS      SPGR    
Sbjct: 1    MEKANTSLVRTKSDQLLESMVAGLKSPPSS--DHSANGVVDSRKSSRWLTGASPGRGGKN 58

Query: 223  THIRKSRSAQL---KLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDD 393
            THIRKSRSAQ+   KL+L++V                       T+PPE+IAD   FSDD
Sbjct: 59   THIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDD 118

Query: 394  DIPEDHEATTCKRVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPGEVL 573
            DIPED EA    +  +EPTLPI+LKFT+V YK+V+K + TT EKDIL+GITGS +PGEVL
Sbjct: 119  DIPEDIEAGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVL 178

Query: 574  ALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLKRRIGFVTQDDVLFPHLTV 753
            ALMGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK RIGFVTQDDVLFPHLTV
Sbjct: 179  ALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTV 238

Query: 754  REXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMIGGSFVRGVSGGERKRVCI 933
            +E                +QKE+RALDVI ELGLERCQDTMIGGSFVRGVSGGERKRVCI
Sbjct: 239  KETLTYAARLRLPKAYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCI 298

Query: 934  GNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHKFDKL 1113
            GNEIIINPSLLFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFHKFDKL
Sbjct: 299  GNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKL 358

Query: 1114 ILL 1122
            ILL
Sbjct: 359  ILL 361


>ref|XP_003519092.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 743

 Score =  431 bits (1108), Expect = e-118
 Identities = 240/366 (65%), Positives = 269/366 (73%), Gaps = 12/366 (3%)
 Frame = +1

Query: 61   METPTSGLARTQSDQLD---IAIRKSPSRTFLNE---ADSGVSLSRKSSFGKRMPSPGR- 219
            ME   + L RT+SDQL    +A  KSP+ +  +     + G ++SRKSS      SPGR 
Sbjct: 1    MEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVVEGGGTISRKSSRRLTGASPGRG 60

Query: 220  --KTHIRKSRSAQL---KLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGF 384
               THIRKSRSAQ+   KL+L++V                       T+PPE+IAD   F
Sbjct: 61   GKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPF 120

Query: 385  SDDDIPEDHEATTCKRVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPG 564
            SDDDIPED E+    +  +EPTLPI+LKFT+V YK+V+K + TT EKDIL+GITGS +PG
Sbjct: 121  SDDDIPEDIESGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPG 180

Query: 565  EVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLKRRIGFVTQDDVLFPH 744
            EVLALMGPSGSGKTTLLNLLGGRL   + GGSITYNDQPYSK LK RIGFVTQDDVLFPH
Sbjct: 181  EVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPH 240

Query: 745  LTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMIGGSFVRGVSGGERKR 924
            LTV+E                +QKE+RALDVI ELGLERCQDTMIGGSFVRGVSGGERKR
Sbjct: 241  LTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKR 300

Query: 925  VCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHKF 1104
            VCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFHKF
Sbjct: 301  VCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKF 360

Query: 1105 DKLILL 1122
            DKLILL
Sbjct: 361  DKLILL 366


>ref|XP_003553629.1| PREDICTED: ABC transporter G family member 22-like [Glycine max]
          Length = 736

 Score =  430 bits (1105), Expect = e-118
 Identities = 237/355 (66%), Positives = 268/355 (75%), Gaps = 5/355 (1%)
 Frame = +1

Query: 73   TSGLARTQSDQLDIAIRKSPSRTFLNEADSGVSLSRKSSFGKRMPSPG----RKTHIRKS 240
            TS LART+SDQL   +  +  ++    A+ G  LSRKSS+     SPG    R T+IRK+
Sbjct: 6    TSSLARTKSDQLLETVATTAEKS-PPSAEGGGVLSRKSSWRMTASSPGGGGGRNTYIRKA 64

Query: 241  RSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDDDIPEDHEAT 420
            RSAQLK++++EV                       T+PP++IAD   FSDDDIPED EA 
Sbjct: 65   RSAQLKVEVDEVGSGVALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAG 124

Query: 421  TCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPGEVLALMGPSGS 597
            T K +  +EPTLPI+LKFT+V YKVV+K + TT EKDIL GITGS +PGEVLALMGPSGS
Sbjct: 125  TPKPKFQTEPTLPIYLKFTDVTYKVVMKGITTTKEKDILKGITGSVNPGEVLALMGPSGS 184

Query: 598  GKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLKRRIGFVTQDDVLFPHLTVREXXXXXX 777
            GKT+LLNLLGGRL +S  GGSITYNDQPYSK LK RIGFVTQDDVLFPHLTV+E      
Sbjct: 185  GKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAA 244

Query: 778  XXXXXXXXXXQQKEERALDVICELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINP 957
                      +QKE+RAL+VI ELGLERCQDTMIGGS+VRG+SGGERKRVCIGNEIIINP
Sbjct: 245  RLRLPNTLTKEQKEKRALEVIDELGLERCQDTMIGGSYVRGISGGERKRVCIGNEIIINP 304

Query: 958  SLLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHKFDKLILL 1122
            SLLFLDEPTSGLDSTTALRIVQML DIAE GKTVVTTIHQPSSRLFHKFDKLILL
Sbjct: 305  SLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILL 359


>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  429 bits (1103), Expect = e-118
 Identities = 238/360 (66%), Positives = 267/360 (74%), Gaps = 15/360 (4%)
 Frame = +1

Query: 88   RTQSDQL-------DIAIRKSPSRTFLNEADSGVSLSRKSSFGKRMP-SPGR------KT 225
            RT+SDQL         A+R   S      A+SG +LSRKSS    M  SPGR       T
Sbjct: 2    RTKSDQLVETAEAVAAAMRSPTSGEATGGAESGGTLSRKSSRRSMMSASPGRAGGNSKNT 61

Query: 226  HIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLHGFSDDDIPE 405
            HIRKSRSAQ+KLDL+EV                       TVPP++I+D   FSDDD P+
Sbjct: 62   HIRKSRSAQIKLDLDEVSSGAALSRASSASLGFSFSFTGFTVPPDEISDFKPFSDDDTPD 121

Query: 406  DHEATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSASPGEVLALM 582
            D EA   K R+ +EPTLPI+LKF +V YKV++K +RT VEK+IL+GITGS +PGEVLALM
Sbjct: 122  DLEAGMRKQRIQAEPTLPIYLKFKDVTYKVILKGMRTNVEKEILNGITGSVNPGEVLALM 181

Query: 583  GPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLKRRIGFVTQDDVLFPHLTVREX 762
            GPSGSGKTTLLNLLGGRL++   GGS+TYNDQPYSK+LK +IGFVTQDDVLFPHLTVRE 
Sbjct: 182  GPSGSGKTTLLNLLGGRLNQPTAGGSVTYNDQPYSKSLKSKIGFVTQDDVLFPHLTVRET 241

Query: 763  XXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMIGGSFVRGVSGGERKRVCIGNE 942
                           QQKE+RA+DVI ELGL+RCQDTMIGGSFVRGVSGGERKRV IGNE
Sbjct: 242  LTYAARLRLPKTLTKQQKEKRAVDVIYELGLDRCQDTMIGGSFVRGVSGGERKRVSIGNE 301

Query: 943  IIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLFHKFDKLILL 1122
            IIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAE GKTV+TTIHQPSSRLFHKFDKLILL
Sbjct: 302  IIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTVLTTIHQPSSRLFHKFDKLILL 361


>ref|XP_002322764.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222867394|gb|EEF04525.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 744

 Score =  427 bits (1099), Expect = e-117
 Identities = 237/369 (64%), Positives = 272/369 (73%), Gaps = 15/369 (4%)
 Frame = +1

Query: 61   METPTSGLARTQSDQLDIAIR---KSPSRTF---LNEADSGVSLSRKSSFGKRMP-SPGR 219
            ME   + LART+S+QL   +    KSPS      +++  SG +LSRKSS    M  SPGR
Sbjct: 1    MEKENTSLARTRSEQLVETVAAAFKSPSNNEAIGVSDGSSGGTLSRKSSKRLMMAASPGR 60

Query: 220  KT-------HIRKSRSAQLKLDLEEVXXXXXXXXXXXXXXXXXXXXXXXTVPPEDIADLH 378
             T       HIRKSRSAQ+K DL++V                        +PP++IAD  
Sbjct: 61   STSGGNKNTHIRKSRSAQMKFDLDDVSSGAALSRASSASLGFSFSFTGFNMPPDEIADSK 120

Query: 379  GFSDDDIPEDHEATTCK-RVHSEPTLPIFLKFTEVKYKVVVKSVRTTVEKDILHGITGSA 555
             FSDDDIPED EA T K +  +EPTLPI+LKFT+V YKV++K + +T EKDIL+GI+GS 
Sbjct: 121  PFSDDDIPEDLEAGTRKPKFQTEPTLPIYLKFTDVTYKVIIKGMTSTEEKDILYGISGSV 180

Query: 556  SPGEVLALMGPSGSGKTTLLNLLGGRLDRSLPGGSITYNDQPYSKTLKRRIGFVTQDDVL 735
             PGEVLALMGPSGSGKTTLLNL+GGRL+++  GGS+TYNDQPYSK LK RIGFVTQDDVL
Sbjct: 181  DPGEVLALMGPSGSGKTTLLNLIGGRLNQTTVGGSLTYNDQPYSKFLKSRIGFVTQDDVL 240

Query: 736  FPHLTVREXXXXXXXXXXXXXXXXQQKEERALDVICELGLERCQDTMIGGSFVRGVSGGE 915
            FPHLTV+E                +QK++RA+DVI ELGLERCQDTMIGGSFVRGVSGGE
Sbjct: 241  FPHLTVKETLTYAALLRLPKTLTKEQKQKRAIDVIYELGLERCQDTMIGGSFVRGVSGGE 300

Query: 916  RKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEDGKTVVTTIHQPSSRLF 1095
            RKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQ+L DIAE GKTVVTTIHQPSSRLF
Sbjct: 301  RKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQLLQDIAEGGKTVVTTIHQPSSRLF 360

Query: 1096 HKFDKLILL 1122
            HKFDKLILL
Sbjct: 361  HKFDKLILL 369


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