BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022148
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatul...   107   4e-21
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    99   2e-18
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    96   1e-17
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               96   2e-17

>ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485675|gb|AES66878.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score =  107 bits (268), Expect = 4e-21
 Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 9/260 (3%)
 Frame = -1

Query: 783 KREDRLTSLPEVILQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLLYSTKSKR 604
           K +D +++LP+ I+ +IL+FL TK+AV  S+LS KW YLW  +  LDF D   +S    R
Sbjct: 19  KGQDLISNLPDHIIGYILYFLSTKEAVRTSVLSKKWIYLWKFITKLDFDDKNHFSLNKIR 78

Query: 603 EDQIIDNLLHSTKRKREDPIIKEKFTDFVYRVLL-FHDSNIQKFFLKFTANY-----TAS 442
                                K+ F DFV RVLL  + ++IQ F LK +  Y      + 
Sbjct: 79  ---------------------KKGFVDFVDRVLLHLNSAHIQSFSLKMSEEYNYFYINSF 117

Query: 441 QVNAWISGVLWCPVRELVIKFSSKVSNRLPQCLYSCESITIKMRSRVSIRLPQCLFSCES 262
            +N WIS V+   VR L              C+Y  + + I++ S         LF C+S
Sbjct: 118 NINKWISVVVNLRVRNL--------------CIYLKKGLEIQLVSF------DALFKCQS 157

Query: 261 LTTLKMKSLEHKLPALITFSSLTVLHLEYVEFTNTCDTPIQQVT--FNLPVLEEFRLQEC 88
           L  L +      LP+ +  SSLT+L L  +  T TCD+  +  T   N P L ++   +C
Sbjct: 158 LEELVLNGCAFTLPSFVCLSSLTILKLSRI--TITCDSSNESKTLALNFPALRKYETLDC 215

Query: 87  RWWNM-NIIVFAPLLKSLYI 31
            + N+ ++ +  PLL+ + I
Sbjct: 216 TFLNVKSVTLQVPLLEVVSI 235


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  105 bits (263), Expect = 1e-20
 Identities = 87/254 (34%), Positives = 121/254 (47%), Gaps = 3/254 (1%)
 Frame = -1

Query: 777 EDRLTSLPEVILQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLLYSTKSKRED 598
           E  + +LP+ +L+HIL FL T+ AV  SILS KW +LW S   L F              
Sbjct: 25  EKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFFG------------ 72

Query: 597 QIIDNLLHSTKRKREDPIIKEKFTDFVYRVL-LFHDSNIQKFFLKFTANYTASQVNAWIS 421
                 L S KRK         F DFV RVL L   SNI +F+L        S+V  WIS
Sbjct: 73  ------LKSPKRK--------LFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWIS 118

Query: 420 GVLWCPVRELVIKFSS-KVSNRLPQCLYSCESITIKMRSRVSIRLPQCLFSCESLTTLKM 244
             +   V++L ++    + S  LP CL++CE++T      + I +P  L           
Sbjct: 119 AAVNRNVKDLYLELRDFEASFVLPHCLFNCETLT-----ELEINMPYIL----------- 162

Query: 243 KSLEHKLPALITFSSLTVLHLEYVEFTNTCDTPIQQVTFNLPVLEEFRLQECRWWNM-NI 67
                KLP+ I+ S L +L+L  V FT+   T   Q  F+LP L E  + EC W N+  +
Sbjct: 163 -----KLPSSISLSCLKILNLYEVIFTDDHST---QQLFSLPNLVELEIHECNWMNLVAV 214

Query: 66  IVFAPLLKSLYIED 25
            + AP L+SL I +
Sbjct: 215 SISAPKLQSLDIHE 228


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 3/256 (1%)
 Frame = -1

Query: 789 VVKREDRLTSLPEVILQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLLYSTKS 610
           +V  +D ++ LPE IL +IL  L T++AV  SIL+TKWRYLWT +PV DF D+       
Sbjct: 18  MVDMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDS------- 70

Query: 609 KREDQIIDNLLHSTKRKREDPIIKEKFTDFVYRVLLFHDSN-IQKFFLKFTANYT-ASQV 436
                       S KR  + P   +   D V ++L  H SN I+K F++       A +V
Sbjct: 71  ------------SPKRNSKSP---DCLVDLVDQLL--HKSNRIKKLFIELPVTIVDAGKV 113

Query: 435 NAWISGVLWCPVRELVIKFSSKVSNRLPQCLYSCESITIKMRSRVSIRLPQCLFSCESLT 256
           ++ +S  L   V +L +   S+ S  +                     LP    +  SLT
Sbjct: 114 SSMLSSALMHDVHDLTLNLESENSRFV---------------------LPNSFSASRSLT 152

Query: 255 TLKMK-SLEHKLPALITFSSLTVLHLEYVEFTNTCDTPIQQVTFNLPVLEEFRLQECRWW 79
            L +       +P  I F SL +L   +V FTN  +   Q++    PVL++   ++C W 
Sbjct: 153 KLDIVFGFLDSVPDGICFPSLKILSFAHVTFTN--EKSAQRLFSGCPVLQDLSFEKCYWV 210

Query: 78  NMNIIVFAPLLKSLYI 31
           N+NI V  P LK L I
Sbjct: 211 NINISVAIPTLKKLDI 226


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
 Frame = -1

Query: 801 RNEKVVKREDRLTSLPEVILQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLLY 622
           + +K  K +D +++LP+ I+  +L FLPTKDAV  S+LS +W YLWT +  LDF D++ Y
Sbjct: 18  KRQKSNKGQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDF-DDIGY 76

Query: 621 STKSKREDQIIDNLLHSTKRKREDPIIKEKFTDFVYRVLL-FHDSNIQKFFLKFTANYTA 445
            + ++                    I K  F DFV RVLL  +  +I+ F LK +  Y +
Sbjct: 77  CSSNE--------------------IRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDS 116

Query: 444 SQVNAWISGVLWCPVRELVIKFSSKVSNRLPQCLYSCESITIKMRSRVSIRLPQCLFSCE 265
           S +N WIS V+   VR+L +   + ++                    VS      L  C+
Sbjct: 117 SYINKWISIVINLRVRKLRVYLQNDLA--------------------VS---SDPLLKCQ 153

Query: 264 SLTTLKMKSLEHKLPALITFSSLTVLHLEYVEFTNTCDTPIQQVTFNLPVLEEFRLQECR 85
           SL  L +      L   +  SSL VL+L  +  + +     + +T N PVL +F    C 
Sbjct: 154 SLEELVLSRCAITLSTFVCLSSLAVLNLYCIIISCSSSNDSKTLTLNFPVLRKFVTFGCI 213

Query: 84  WWNM-NIIVFAPLLKSLYI 31
              + ++I+  PLL+ + I
Sbjct: 214 LSGVKSVILQVPLLEVVSI 232


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
 Frame = -1

Query: 783 KREDRLTSLPEVILQHILFFLPTKDAVGASILSTKWRYLWTSVPVLDFSDNLLYSTKSKR 604
           K  DR+++LP+ +L HI+ FLPTK AVG S+LS +WRYLW S+P LDF D+LL      R
Sbjct: 7   KSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLD----R 62

Query: 603 EDQIIDNLLHSTKRKREDPIIKEKFTDFVYRVLLFHD-SNIQKFFLKFTANYTASQVNAW 427
           +  I D+         E  I    F +FV +VLL    S I+KF LK + +   S VN+W
Sbjct: 63  DKPIGDS---------ERSIC---FKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSW 110

Query: 426 ISGVLWCPVRELVIKFSSKVSNRLPQCLYSCESITI 319
           I   L   V+EL + F ++    LP   + C+++ +
Sbjct: 111 ICTALERNVQELDLYFDTEYPIELPPKFFFCKTLVV 146