BLASTX nr result

ID: Coptis25_contig00022147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022147
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33278.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002465363.1| hypothetical protein SORBIDRAFT_01g037210 [S...    63   2e-08
ref|XP_003597448.1| AP2-like ethylene-responsive transcription f...    62   4e-08
dbj|BAF81518.1| AP2/EREBP transcription factor [Brassica rapa]         62   6e-08
gb|AFU81582.1| AP2-EREBP-type transcription factor, partial [Zea...    61   8e-08

>emb|CBI33278.3| unnamed protein product [Vitis vinifera]
          Length = 635

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +1

Query: 199 TLENSVCRHRWIGRYEAHLWDNTRRREGQSRKERQGISL 315
           ++   V RHRW GRYEAHLWDN+ RREGQ+RK RQG+SL
Sbjct: 234 SIYRGVTRHRWTGRYEAHLWDNSSRREGQARKGRQGLSL 272


>ref|XP_002465363.1| hypothetical protein SORBIDRAFT_01g037210 [Sorghum bicolor]
           gi|241919217|gb|EER92361.1| hypothetical protein
           SORBIDRAFT_01g037210 [Sorghum bicolor]
          Length = 424

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +1

Query: 181 TTTAQETLENSVCRHRWIGRYEAHLWDNTRRREGQSRKERQG 306
           TT+ + ++   V RHRW GRYEAHLWDNT R+EGQ RK RQG
Sbjct: 138 TTSHRTSIYRGVTRHRWTGRYEAHLWDNTCRKEGQKRKGRQG 179


>ref|XP_003597448.1| AP2-like ethylene-responsive transcription factor BBM [Medicago
           truncatula] gi|355486496|gb|AES67699.1| AP2-like
           ethylene-responsive transcription factor BBM [Medicago
           truncatula]
          Length = 522

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +1

Query: 199 TLENSVCRHRWIGRYEAHLWDNTRRREGQSRKERQG 306
           ++   V RHRW GRYEAHLWDNT RREGQSRK RQG
Sbjct: 169 SIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQG 204


>dbj|BAF81518.1| AP2/EREBP transcription factor [Brassica rapa]
          Length = 323

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = +1

Query: 199 TLENSVCRHRWIGRYEAHLWDNTRRREGQSRKERQGISL*ASYHCLF 339
           ++   V RHRW GRYEAHLWDN+ RREGQ+RK RQGI     + C F
Sbjct: 268 SIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGI-----FFCFF 309


>gb|AFU81582.1| AP2-EREBP-type transcription factor, partial [Zea mays subsp. mays]
           gi|414865110|tpg|DAA43667.1| TPA: putative AP2/EREBP
           transcription factor superfamily protein isoform 1 [Zea
           mays] gi|414865111|tpg|DAA43668.1| TPA: putative
           AP2/EREBP transcription factor superfamily protein
           isoform 2 [Zea mays] gi|414865112|tpg|DAA43669.1| TPA:
           putative AP2/EREBP transcription factor superfamily
           protein isoform 3 [Zea mays]
           gi|414865113|tpg|DAA43670.1| TPA: putative AP2/EREBP
           transcription factor superfamily protein isoform 4 [Zea
           mays]
          Length = 310

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/44 (65%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
 Frame = +1

Query: 184 TTAQETLE-NSVCRHRWIGRYEAHLWDNTRRREGQSRKERQGIS 312
           T  Q T +   V RHRW GRYEAHLWDNT R+EGQ+RK RQG S
Sbjct: 264 TFGQRTSQFRGVTRHRWTGRYEAHLWDNTCRKEGQTRKGRQGCS 307


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