BLASTX nr result

ID: Coptis25_contig00022139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022139
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264...   174   2e-41
ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220...   158   1e-36
ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arab...   154   1e-35
ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana] ...   148   1e-33
ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33

>ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264616 [Vitis vinifera]
           gi|147788706|emb|CAN65294.1| hypothetical protein
           VITISV_017781 [Vitis vinifera]
          Length = 167

 Score =  174 bits (441), Expect = 2e-41
 Identities = 84/166 (50%), Positives = 114/166 (68%)
 Frame = -3

Query: 653 MGVSASKRVSKSLQDSPQFTTTCNSVYKNCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 474
           MG+SASKRV  SLQ+SP+F + C+SVY  CL+L++HAF G+RPY                
Sbjct: 1   MGLSASKRVKSSLQNSPKFDSVCDSVYSECLDLSEHAFAGVRPYQLSGASLRLHQSLCDH 60

Query: 473 XXLIKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAGKA 294
             LIK+WVPSPP Q QVD AL  +T++      +TL +  FK F VE+F D +V  AG+A
Sbjct: 61  HPLIKRWVPSPPTQLQVDRALRVVTRSGDSVQDQTLGRVEFKAFEVELFADAVVAGAGQA 120

Query: 293 VVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYLSLS 156
           ++ RVP G+ GIAG+G++ +SGKE+V + +GVYALGVAT++YL LS
Sbjct: 121 LLRRVPIGVAGIAGVGLVARSGKELVATAIGVYALGVATSVYLGLS 166


>ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220555 [Cucumis sativus]
           gi|449484752|ref|XP_004156970.1| PREDICTED:
           uncharacterized protein LOC101227331 [Cucumis sativus]
          Length = 169

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/168 (47%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
 Frame = -3

Query: 653 MGVSASKRVSKSLQDSPQFTTTCNSVYKNCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 474
           MG+SASKRV  SL +S +F + CNS + +CL LTQHA+ G+ PY                
Sbjct: 1   MGISASKRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60

Query: 473 XXL--IKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 300
                I  W+PSPP + QVD+AL  + ++  D+  E L   +F  +A+E+F + +V N G
Sbjct: 61  QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVG 120

Query: 299 KAVVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYLSLS 156
           K V+ RVP GI GIAGIG +T+SGK+VVG+V+ VYALGVAT++YLSLS
Sbjct: 121 KKVMVRVPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLS 168


>ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arabidopsis lyrata subsp.
           lyrata] gi|297325892|gb|EFH56312.1| hypothetical protein
           ARALYDRAFT_483465 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/168 (46%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
 Frame = -3

Query: 653 MGVSASKRVSKSLQDSPQFTTTCNSVYKNCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 474
           MG+S SKRV+  L +SP+F + C+S Y+  L+L QHAF G+RPY                
Sbjct: 1   MGISGSKRVTTILSNSPEFNSACDSAYEESLSLAQHAFAGVRPYQLVSAAAHIHRNLSSL 60

Query: 473 XXL-IKKWVPSPPNQNQVDTALS-TITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 300
               I +WVPSPP+Q+QVD+AL  T+++ +  +  E L    FKE+AVEVF + +V NA 
Sbjct: 61  GFSLITRWVPSPPSQSQVDSALRVTVSRVAAAEEEEILGPEEFKEWAVEVFAEAVVGNAR 120

Query: 299 KAVVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYLSLS 156
           K +  ++P GIVGIAGIG +T+SG+ ++G+ +GVYA+GVAT+++LSLS
Sbjct: 121 KTIASQIPLGIVGIAGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLS 168


>ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2288994|gb|AAB64323.1| expressed protein [Arabidopsis
           thaliana] gi|21555198|gb|AAM63802.1| unknown
           [Arabidopsis thaliana] gi|194708808|gb|ACF88488.1|
           At2g43540 [Arabidopsis thaliana]
           gi|330255194|gb|AEC10288.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 169

 Score =  148 bits (373), Expect = 1e-33
 Identities = 75/168 (44%), Positives = 110/168 (65%), Gaps = 2/168 (1%)
 Frame = -3

Query: 653 MGVSASKRVSKSLQDSPQFTTTCNSVYKNCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 474
           MG+S SKRV+  L +SP+F + C+S Y   L+L QHAF G+RPY                
Sbjct: 1   MGISGSKRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSAL 60

Query: 473 XXL-IKKWVPSPPNQNQVDTALS-TITKNSPDQNIETLNQTIFKEFAVEVFKDVIVYNAG 300
               I +W+ SPP+Q+QVD+AL  T+++ +     E L Q  FK++AVEVF + +V NA 
Sbjct: 61  RFPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNAR 120

Query: 299 KAVVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYLSLS 156
           K +  R+P GIVGI GIG +T+SG+ ++G+ +GVYA+GVAT+++LSL+
Sbjct: 121 KTIASRIPLGIVGIGGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLT 168


>ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|222853321|gb|EEE90868.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  146 bits (369), Expect = 3e-33
 Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
 Frame = -3

Query: 653 MGVSASKRVSKSLQDSPQFTTTCNSVYKNCLNLTQHAFPGIRPYXXXXXXXXXXXXXXXX 474
           MG+SASKRV  +L +S +F   C+S + +CL+LTQHAF GI PY                
Sbjct: 1   MGISASKRVKTTLSNSQEFNLACDSTFTHCLSLTQHAFQGILPYQLPTATTYLHTTLTTT 60

Query: 473 XXL---IKKWVPSPPNQNQVDTALSTITKNSPDQNIETLNQTI-----FKEFAVEVFKDV 318
                 I KWVPSPP + Q+D AL  +    P    E   + I     F+E+A+ +F + 
Sbjct: 61  AAAAPLILKWVPSPPTRGQIDWALRMVANRKPGAAQEEKGELILEHAKFREWALVLFTEA 120

Query: 317 IVYNAGKAVVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYLSLS 156
            V NAGKA++ R+P G+ GI G+G + K GKEVVG+ +GVYALGV T++YLSLS
Sbjct: 121 AVGNAGKAILGRLPLGVAGIVGVGAVVKGGKEVVGAAIGVYALGVVTSVYLSLS 174


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