BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022136
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi...   299   3e-79
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]   295   5e-78
ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|2...   286   3e-75
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,...   277   1e-72
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70

>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  299 bits (766), Expect = 3e-79
 Identities = 145/217 (66%), Positives = 168/217 (77%)
 Frame = -2

Query: 651 NQGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGV 472
           NQGLVP+  TLN +             E +F EMC+RGVSP+  SF +M+   C  G  V
Sbjct: 182 NQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR-V 240

Query: 471 SEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAF 292
            E ERWL AM E+G+ +DN  CTL++D FC+ G   +V G F KMVE G  PNVIN+TA 
Sbjct: 241 LEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTAL 300

Query: 291 VNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDS 112
           +NGLCK+GSIKQAFE+LEEMVR+GWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRSD 
Sbjct: 301 INGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 111 YKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           YKPNVHTYTAMI+GYCKE+K+NRAEMLL+RMQEQGLV
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397



 Score =  117 bits (294), Expect = 1e-24
 Identities = 68/215 (31%), Positives = 111/215 (51%)
 Frame = -2

Query: 648  QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
            QGLVPN +T   +               + D M K G SPN  ++N +I G C+ GS + 
Sbjct: 394  QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS-LD 452

Query: 468  EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFV 289
            E  R L  +   G   D V  T+++   C+     +    F KM++ G+ P++ +YT  +
Sbjct: 453  EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512

Query: 288  NGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSY 109
            +  C++  +K++  + EE V  G  P   T+T++I G C+ G T  A +LF ++  +   
Sbjct: 513  STFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM-SNHGC 571

Query: 108  KPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
             P+  TY A+ISG CKE+K++ A  L   M ++GL
Sbjct: 572  APDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  116 bits (291), Expect = 3e-24
 Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
 Frame = -2

Query: 645  GLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSE 466
            GL PNV     +               + +EM +RG  PN  +   +I G C+ G     
Sbjct: 289  GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 465  VERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVN 286
               +LK +   GY  +    T +++ +CK     +   L  +M E+G  PN   YT  ++
Sbjct: 349  FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 285  GLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL----VRS 118
            G CK G+  +A+E+++ M ++G+ PN+YT+ A+IDGLCKKG  ++A+RL  K+    +++
Sbjct: 409  GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 117  D------------------------------SYKPNVHTYTAMISGYCKENKMNRAEMLL 28
            D                               + P++H+YT +IS +C++ +M  +E L 
Sbjct: 469  DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLF 528

Query: 27   TRMQEQGLV 1
                  GL+
Sbjct: 529  EEAVSLGLI 537



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/184 (24%), Positives = 81/184 (44%)
 Frame = -2

Query: 561  FDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFFC 382
            F++M K G +P+  S+  +I   CR    + E ER  +     G        T ++  +C
Sbjct: 493  FNKMLKVGFTPDIHSYTTLISTFCRQKQ-MKESERLFEEAVSLGLIPTKKTYTSMICGYC 551

Query: 381  KMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNVY 202
            + G       LF++M   G  P+ I Y A ++GLCK   +  A  + + M+ KG  P   
Sbjct: 552  RYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEV 611

Query: 201  THTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTR 22
            T   L    CKK  +  A  +  +L +    +  + T   ++   C E K++ A +   +
Sbjct: 612  TRLTLAYEYCKKDDSSTAINVLDRLEK----RQWIRTVNTLVRKLCSEGKLDMAALFFHK 667

Query: 21   MQEQ 10
            + ++
Sbjct: 668  LLDK 671


>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  295 bits (755), Expect = 5e-78
 Identities = 143/217 (65%), Positives = 167/217 (76%)
 Frame = -2

Query: 651 NQGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGV 472
           NQGLV +  TLN +             E +F EMC+RGVSP+  SF +M+   C  G  V
Sbjct: 182 NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR-V 240

Query: 471 SEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAF 292
            E E+WL AM E+G+ +DN  CTL++D FC+ G   +V G F KMVE G  PNVIN+TA 
Sbjct: 241 LEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTAL 300

Query: 291 VNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDS 112
           +NGLCK+GSIKQAFE+LEEMVR+GWKPNVYTHT LIDGLCKKGWTEKAFRLFLKLVRSD 
Sbjct: 301 INGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 111 YKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           YKPNVHTYTAMI+GYCKE+K+NRAEMLL+RMQEQGLV
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397



 Score =  118 bits (295), Expect = 1e-24
 Identities = 68/215 (31%), Positives = 111/215 (51%)
 Frame = -2

Query: 648  QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
            QGLVPN +T   +               + D M K G SPN  ++N +I G C+ GS + 
Sbjct: 394  QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS-LD 452

Query: 468  EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFV 289
            E  R L  +   G   D V  T+++   C+     +    F KM++ G+ P++ +YT  +
Sbjct: 453  EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLI 512

Query: 288  NGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSY 109
            +  C++  +K++  + EE V  G  P   T+T++I G C+ G T  A +LF ++  +   
Sbjct: 513  SXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM-SNHGC 571

Query: 108  KPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
             P+  TY A+ISG CKE+K++ A  L   M ++GL
Sbjct: 572  APDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606



 Score =  117 bits (292), Expect = 2e-24
 Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
 Frame = -2

Query: 645  GLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSE 466
            GL PNV     +               + +EM +RG  PN  +   +I G C+ G     
Sbjct: 289  GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 465  VERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVN 286
               +LK +   GY  +    T +++ +CK     +   L  +M E+G  PN   YT  ++
Sbjct: 349  FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 285  GLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKL----VRS 118
            G CK G+  +A+E+++ M ++G+ PN+YT+ A+IDGLCKKG  ++A+RL  K+    +++
Sbjct: 409  GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 117  D------------------------------SYKPNVHTYTAMISGYCKENKMNRAEMLL 28
            D                               + P++H+YT +IS +C++ +M  +E L 
Sbjct: 469  DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLF 528

Query: 27   TRMQEQGLV 1
                  GL+
Sbjct: 529  EEAVSLGLI 537



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 45/184 (24%), Positives = 81/184 (44%)
 Frame = -2

Query: 561  FDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFFC 382
            F++M K G +P+  S+  +I   CR    + E ER  +     G        T ++  +C
Sbjct: 493  FNKMLKVGFTPDIHSYTTLISXFCRQKQ-MKESERLFEEAVSLGLIPTKKTYTSMICGYC 551

Query: 381  KMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNVY 202
            + G       LF++M   G  P+ I Y A ++GLCK   +  A  + + M+ KG  P   
Sbjct: 552  RYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEV 611

Query: 201  THTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTR 22
            T   L    CKK  +  A  +  +L +    +  + T   ++   C E K++ A +   +
Sbjct: 612  TRLTLAYEYCKKDDSSTAINVLDRLEK----RQWIRTVNTLVRKLCSEGKLDMAALFFHK 667

Query: 21   MQEQ 10
            + ++
Sbjct: 668  LLDK 671


>ref|XP_002322376.1| predicted protein [Populus trichocarpa] gi|222869372|gb|EEF06503.1|
           predicted protein [Populus trichocarpa]
          Length = 715

 Score =  286 bits (731), Expect = 3e-75
 Identities = 139/217 (64%), Positives = 166/217 (76%)
 Frame = -2

Query: 651 NQGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGV 472
           N GLV  V TLN +             E VFDEM  RGV P+S S+ +M   +CR G  +
Sbjct: 189 NHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGR-I 247

Query: 471 SEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAF 292
           S+ +RWLK M  +G+ +DN  CTL++  FC+ G A +VF  F+K VE G  PN+IN+T+ 
Sbjct: 248 SDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSL 307

Query: 291 VNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDS 112
           +NGLCKRGSIKQAFE+LEEMV+KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 
Sbjct: 308 INGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDD 367

Query: 111 YKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           YKPNVHTYT+MI GYCKE+K+NRAEMLL+RM+EQGLV
Sbjct: 368 YKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLV 404



 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 36/224 (16%)
 Frame = -2

Query: 567 YVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDF 388
           + FD+  + G+ PN  +F  +I G C+ GS + +    L+ M +KG+  +    T ++D 
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGS-IKQAFEMLEEMVKKGWKPNVYTHTALIDG 345

Query: 387 FCKMGCAGKVFGLFEKMVEKG-YPPNVINYTAFVNGLCKR-------------------- 271
            CK G   K F LF K+V    Y PNV  YT+ ++G CK                     
Sbjct: 346 LCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVP 405

Query: 270 ---------------GSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 136
                          G+ ++A+E+++ M ++G+  N++T+ A ID LCKKG   +A +L 
Sbjct: 406 NTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLL 465

Query: 135 LKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
            K  R       V TYT +IS  C+      A +  ++M + G+
Sbjct: 466 KKGFRLGLQADTV-TYTILISELCRRADTREALVFFSKMFKAGV 508



 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 52/177 (29%), Positives = 95/177 (53%)
 Frame = -2

Query: 531 PNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFG 352
           PN  ++  MI G+C+    ++  E  L  M E+G   +    T ++D   K G   K + 
Sbjct: 370 PNVHTYTSMIHGYCKEDK-LNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYE 428

Query: 351 LFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLC 172
           L + M ++G+  N+  Y AF++ LCK+G   +A ++L++  R G + +  T+T LI  LC
Sbjct: 429 LMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELC 488

Query: 171 KKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           ++  T +A   F K+ ++   +P++HTY  +I+ + ++ +M  +E L       GLV
Sbjct: 489 RRADTREALVFFSKMFKA-GVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLV 544



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 54/210 (25%), Positives = 99/210 (47%)
 Frame = -2

Query: 636 PNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVER 457
           PNVHT   +             E +   M ++G+ PN+ ++  +I GH +AG+     E 
Sbjct: 370 PNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYEL 429

Query: 456 WLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLC 277
            +  M ++G+  +       +D  CK G   +   L +K    G   + + YT  ++ LC
Sbjct: 430 -MDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELC 488

Query: 276 KRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNV 97
           +R   ++A     +M + G +P+++T+  LI    ++   E++ +LF + V      P  
Sbjct: 489 RRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAV-GLGLVPTK 547

Query: 96  HTYTAMISGYCKENKMNRAEMLLTRMQEQG 7
            TYT+MI GYC++  ++ A     RM + G
Sbjct: 548 ETYTSMICGYCRDRNVSLALKFFNRMSDHG 577



 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 59/215 (27%), Positives = 97/215 (45%)
 Frame = -2

Query: 648  QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
            QGLVPN  T   +               + D M K G S N  ++N  I   C+ G  + 
Sbjct: 401  QGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFL- 459

Query: 468  EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFV 289
            E  + LK  F  G   D V  T+++   C+     +    F KM + G  P++  Y   +
Sbjct: 460  EACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLI 519

Query: 288  NGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSY 109
                ++  ++++ ++  E V  G  P   T+T++I G C+      A + F ++      
Sbjct: 520  AAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRM-SDHGC 578

Query: 108  KPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
             P+  TY A+ISG CKE+K++ A  L   M ++GL
Sbjct: 579  TPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL 613



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 44/184 (23%), Positives = 78/184 (42%)
 Frame = -2

Query: 561  FDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFFC 382
            F +M K GV P+  ++N +I    R    + E E+        G        T ++  +C
Sbjct: 500  FSKMFKAGVQPDMHTYNTLIAAFSRQRR-MEESEKLFAEAVGLGLVPTKETYTSMICGYC 558

Query: 381  KMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNVY 202
            +          F +M + G  P+ + Y A ++GLCK   + +A ++ E MV KG  P   
Sbjct: 559  RDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEV 618

Query: 201  THTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTR 22
            T   L    CK+  +  A  +  +L +    K  + T   +I   C E K+  A +   +
Sbjct: 619  TRLTLAYEYCKQDDSATAMVILERLDK----KLWIRTVNTLIRKLCSERKVGMAVLFFHK 674

Query: 21   MQEQ 10
            + ++
Sbjct: 675  LLDK 678


>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 712

 Score =  277 bits (708), Expect = 1e-72
 Identities = 134/217 (61%), Positives = 163/217 (75%)
 Frame = -2

Query: 651 NQGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGV 472
           N GLV     LN++             E VFDEM  R V P+S S+ +M+ G+CR G  +
Sbjct: 186 NHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGR-I 244

Query: 471 SEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAF 292
           S+V+RWLK M E+GY +DN  CTL++  F + G   + F  F+K V+ G  PN+IN+++ 
Sbjct: 245 SDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSL 304

Query: 291 VNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDS 112
           +NGLCK GSIKQAFE+LEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD+
Sbjct: 305 INGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDN 364

Query: 111 YKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           YKPNV+TYT MI+GYCKE K+NRAEMLL RM+EQGLV
Sbjct: 365 YKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLV 401



 Score =  111 bits (278), Expect = 1e-22
 Identities = 62/214 (28%), Positives = 112/214 (52%)
 Frame = -2

Query: 645 GLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSE 466
           GL PN+   + +               + +EM ++G  PN  +   +I G C+ G     
Sbjct: 293 GLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKA 352

Query: 465 VERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVN 286
              +LK +    Y  +    T +++ +CK     +   L  +M E+G  PN   YT  ++
Sbjct: 353 FRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLID 412

Query: 285 GLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSYK 106
           G CK G+  +A+E+++ M ++G+ PN++T+ A+IDGLCKKG   +A++L  + ++S  + 
Sbjct: 413 GHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHA 472

Query: 105 PNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
             V TYT +IS +C++    +A  + +RM + GL
Sbjct: 473 DKV-TYTILISEFCRQTDNKQALAIFSRMFKVGL 505



 Score =  108 bits (270), Expect = 9e-22
 Identities = 63/215 (29%), Positives = 105/215 (48%)
 Frame = -2

Query: 648  QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
            QGLVPN +T   +               + D M K G +PN  ++N +I G C+ G    
Sbjct: 398  QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR-FP 456

Query: 468  EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFV 289
            E  + L+   + G   D V  T+++  FC+     +   +F +M + G  P++  Y   +
Sbjct: 457  EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLI 516

Query: 288  NGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSY 109
               C++  ++++ ++ EE V  G  P   T+T++I G C+ G    A + F K+ R    
Sbjct: 517  ATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKM-RDYGC 575

Query: 108  KPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
            KP+  TY A+ISG C E+K++ A  L   M + GL
Sbjct: 576  KPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 48/187 (25%), Positives = 82/187 (43%)
 Frame = -2

Query: 564  VFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFF 385
            +F  M K G+ P+  ++NV+I   CR    V E E+  +     G        T ++  +
Sbjct: 496  IFSRMFKVGLQPDMHTYNVLIATFCRQKK-VEESEKLFEEAVGLGLLPTKETYTSMICGY 554

Query: 384  CKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNV 205
            C+ G        F KM + G  P+ I Y A ++GLC    + +A ++ E M+  G  P  
Sbjct: 555  CRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCE 614

Query: 204  YTHTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLT 25
             T   L    CK+G +  A  +  +L +    K  + T   +I   C E K+  A +   
Sbjct: 615  VTRVTLAYEYCKQGDSATAMIILERLEK----KLWIRTVNTLIRKLCSEKKVGVAALFFH 670

Query: 24   RMQEQGL 4
            ++ ++ L
Sbjct: 671  KLLDKDL 677


>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  270 bits (690), Expect = 2e-70
 Identities = 129/216 (59%), Positives = 160/216 (74%)
 Frame = -2

Query: 651 NQGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGV 472
           NQGL P+  TLN++             E +FDEMC RGV PN  S+ VM+ G+C+ G+ V
Sbjct: 160 NQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGN-V 218

Query: 471 SEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAF 292
            E +RWL  M E+G+ +DN   +L+V  FC+ G   +    F +  E G  PN+IN+T  
Sbjct: 219 LESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCM 278

Query: 291 VNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDS 112
           + GLCKRGS+KQAFE+LEEMV +GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS++
Sbjct: 279 IEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSEN 338

Query: 111 YKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
           +KPNV TYTAMISGYC++ KMNRAEMLL+RM+EQGL
Sbjct: 339 HKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGL 374



 Score =  116 bits (290), Expect = 4e-24
 Identities = 62/177 (35%), Positives = 100/177 (56%)
 Frame = -2

Query: 531 PNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFG 352
           PN  ++  MI G+CR    ++  E  L  M E+G   +    T ++D  CK G   + + 
Sbjct: 341 PNVLTYTAMISGYCR-DEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYE 399

Query: 351 LFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLC 172
           L   M E+G+ PNV  Y A V+GLCK+G +++A++VL+   R G   +  T+T LI   C
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459

Query: 171 KKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGLV 1
           K+   ++A  LF K+V+S   +P++H+YT +I+ +C+E +M  +EM        GLV
Sbjct: 460 KQAEIKQALVLFNKMVKS-GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLV 515



 Score =  115 bits (288), Expect = 7e-24
 Identities = 67/215 (31%), Positives = 108/215 (50%)
 Frame = -2

Query: 648  QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
            QGL PN +T   +               + + M + G SPN C++N ++ G C+ G  V 
Sbjct: 372  QGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR-VQ 430

Query: 468  EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMVEKGYPPNVINYTAFV 289
            E  + LK+ F  G   D V  T+++   CK     +   LF KMV+ G  P++ +YT  +
Sbjct: 431  EAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI 490

Query: 288  NGLCKRGSIKQAFEVLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSY 109
               C+   +K++    EE VR G  P   T+T++I G C++G    A + F ++      
Sbjct: 491  AVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCA 550

Query: 108  KPNVHTYTAMISGYCKENKMNRAEMLLTRMQEQGL 4
              ++ TY A+ISG CK++K++ A  L   M E+GL
Sbjct: 551  SDSI-TYGALISGLCKQSKLDEARCLYDAMIEKGL 584



 Score =  112 bits (281), Expect = 5e-23
 Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
 Frame = -2

Query: 648 QGLVPNVHTLNYIXXXXXXXXXXXXXEYVFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVS 469
           +G V +  TL+ I              + F   C+ G+ PN  +F  MI G C+ GS V 
Sbjct: 231 RGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGS-VK 289

Query: 468 EVERWLKAMFEKGYFLDNVECTLVVDFFCKMGCAGKVFGLFEKMV--------------- 334
           +    L+ M  +G+  +    T ++D  CK G   K F LF K+V               
Sbjct: 290 QAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 349

Query: 333 ---------------------EKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGW 217
                                E+G  PN   YT  ++G CK G+ ++A+E++  M  +G+
Sbjct: 350 ISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGF 409

Query: 216 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAE 37
            PNV T+ A++DGLCKKG  ++A+++     R+      V TYT +IS +CK+ ++ +A 
Sbjct: 410 SPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKV-TYTILISEHCKQAEIKQAL 468

Query: 36  MLLTRMQEQGL 4
           +L  +M + G+
Sbjct: 469 VLFNKMVKSGI 479



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 44/185 (23%), Positives = 80/185 (43%)
 Frame = -2

Query: 564  VFDEMCKRGVSPNSCSFNVMIGGHCRAGSGVSEVERWLKAMFEKGYFLDNVECTLVVDFF 385
            +F++M K G+ P+  S+  +I   CR    + E E + +     G    N   T ++  +
Sbjct: 470  LFNKMVKSGIQPDIHSYTTLIAVFCRE-KRMKESEMFFEEAVRFGLVPTNKTYTSMICGY 528

Query: 384  CKMGCAGKVFGLFEKMVEKGYPPNVINYTAFVNGLCKRGSIKQAFEVLEEMVRKGWKPNV 205
            C+ G        F +M + G   + I Y A ++GLCK+  + +A  + + M+ KG  P  
Sbjct: 529  CREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCE 588

Query: 204  YTHTALIDGLCKKGWTEKAFRLFLKLVRSDSYKPNVHTYTAMISGYCKENKMNRAEMLLT 25
             T   L    CK      A  +  +L +    K  V T   ++   C E K+  A +   
Sbjct: 589  VTRVTLAYEYCKIDDGCSAMVVLERLEK----KLWVRTVNTLVRKLCSERKVGMAALFFH 644

Query: 24   RMQEQ 10
            ++ ++
Sbjct: 645  KLLDK 649