BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022120
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   200   4e-49
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   200   4e-49
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         199   8e-49
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   199   8e-49
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             197   3e-48

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  200 bits (509), Expect = 4e-49
 Identities = 100/199 (50%), Positives = 131/199 (65%), Gaps = 2/199 (1%)
 Frame = -3

Query: 966  LVYGVGIISIFMESPHQSHLKAAKRILRYIQGTQDYGTFYSTSHSSALVGYTDSDWAGDI 787
            ++Y VG++S +ME P  +H KAAKRILRYI+GT ++G  YST+    LVGY+DSDW GD+
Sbjct: 1143 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1202

Query: 786  EKRKSTSGYAFHMGSGVFSRSSKKQQXXXXXXXXXXXXXXXXXXA--VWL*RMFEELKQK 613
            + RKSTSG+ F++G   F+  SKKQ                      +WL  + +EL   
Sbjct: 1203 DDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1262

Query: 612  QEISTKIVCDNKSAIALTKNPIFHGRSKHIDIKYHCIRELVKENEIVLEFCPSSDQVADI 433
            QE  TKI  DNKSAIAL KNP+FH RSKHID +YH IRE V + ++ LE+  + DQVADI
Sbjct: 1263 QEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADI 1322

Query: 432  FTNPLKTDTFIKLRKMLGM 376
            FT PLK + FIK+R +LG+
Sbjct: 1323 FTKPLKREDFIKMRSLLGV 1341


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  200 bits (509), Expect = 4e-49
 Identities = 100/199 (50%), Positives = 131/199 (65%), Gaps = 2/199 (1%)
 Frame = -3

Query: 966  LVYGVGIISIFMESPHQSHLKAAKRILRYIQGTQDYGTFYSTSHSSALVGYTDSDWAGDI 787
            ++Y VG++S +ME P  +H KAAKRILRYI+GT ++G  YST+    LVGY+DSDW GD+
Sbjct: 1111 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1170

Query: 786  EKRKSTSGYAFHMGSGVFSRSSKKQQXXXXXXXXXXXXXXXXXXA--VWL*RMFEELKQK 613
            + RKSTSG+ F++G   F+  SKKQ                      +WL  + +EL   
Sbjct: 1171 DDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1230

Query: 612  QEISTKIVCDNKSAIALTKNPIFHGRSKHIDIKYHCIRELVKENEIVLEFCPSSDQVADI 433
            QE  TKI  DNKSAIAL KNP+FH RSKHID +YH IRE V + ++ LE+  + DQVADI
Sbjct: 1231 QEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADI 1290

Query: 432  FTNPLKTDTFIKLRKMLGM 376
            FT PLK + FIK+R +LG+
Sbjct: 1291 FTKPLKREDFIKMRSLLGV 1309


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  199 bits (506), Expect = 8e-49
 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 2/199 (1%)
 Frame = -3

Query: 966  LVYGVGIISIFMESPHQSHLKAAKRILRYIQGTQDYGTFYSTSHSSALVGYTDSDWAGDI 787
            ++Y VG++S +ME P  +H KAAKRILRYI+GT ++G  YST+    LVGY+DSDW GD+
Sbjct: 1143 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1202

Query: 786  EKRKSTSGYAFHMGSGVFSRSSKKQQXXXXXXXXXXXXXXXXXXA--VWL*RMFEELKQK 613
            + RKSTSG+ F++G   F+  SKKQ                      +WL  + +EL   
Sbjct: 1203 DDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1262

Query: 612  QEISTKIVCDNKSAIALTKNPIFHGRSKHIDIKYHCIRELVKENEIVLEFCPSSDQVADI 433
            QE  TKI  DNKSAIAL KNP+FH RSKHID +YH IRE V + ++ LE+  + DQVAD 
Sbjct: 1263 QEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADF 1322

Query: 432  FTNPLKTDTFIKLRKMLGM 376
            FT PLK + FIK+R +LG+
Sbjct: 1323 FTKPLKRENFIKMRSLLGV 1341


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  199 bits (506), Expect = 8e-49
 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 2/199 (1%)
 Frame = -3

Query: 966  LVYGVGIISIFMESPHQSHLKAAKRILRYIQGTQDYGTFYSTSHSSALVGYTDSDWAGDI 787
            ++Y VG++S +ME P  +H KAAKRILRYI+GT ++G  YST+    LVGY+DSDW GD+
Sbjct: 1143 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1202

Query: 786  EKRKSTSGYAFHMGSGVFSRSSKKQQXXXXXXXXXXXXXXXXXXA--VWL*RMFEELKQK 613
            + RKSTSG+ F++G   F+  SKKQ                      +WL  + +EL   
Sbjct: 1203 DDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1262

Query: 612  QEISTKIVCDNKSAIALTKNPIFHGRSKHIDIKYHCIRELVKENEIVLEFCPSSDQVADI 433
            QE  TKI  DNKSAIAL KNP+FH RSKHID +YH IRE V + ++ LE+  + DQVAD 
Sbjct: 1263 QEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADF 1322

Query: 432  FTNPLKTDTFIKLRKMLGM 376
            FT PLK + FIK+R +LG+
Sbjct: 1323 FTKPLKRENFIKMRSLLGV 1341


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  197 bits (501), Expect = 3e-48
 Identities = 99/199 (49%), Positives = 130/199 (65%), Gaps = 2/199 (1%)
 Frame = -3

Query: 966  LVYGVGIISIFMESPHQSHLKAAKRILRYIQGTQDYGTFYSTSHSSALVGYTDSDWAGDI 787
            ++Y VG++S +ME P  +H KAAKRILRYI+GT ++G  YST+    LVGY+DSDW  D+
Sbjct: 1082 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDV 1141

Query: 786  EKRKSTSGYAFHMGSGVFSRSSKKQQXXXXXXXXXXXXXXXXXXA--VWL*RMFEELKQK 613
            + RKSTSG+ F++G   F+  SKKQ                      +WL  + +EL   
Sbjct: 1142 DDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1201

Query: 612  QEISTKIVCDNKSAIALTKNPIFHGRSKHIDIKYHCIRELVKENEIVLEFCPSSDQVADI 433
            QE  TKI  DNKSAIAL KNP+FH RSKHID +YH IRE V + ++ LE+  + DQVADI
Sbjct: 1202 QEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADI 1261

Query: 432  FTNPLKTDTFIKLRKMLGM 376
            FT PLK + FIK+R +LG+
Sbjct: 1262 FTKPLKREDFIKMRSLLGV 1280