BLASTX nr result

ID: Coptis25_contig00022110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022110
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002523718.1| zinc finger protein, putative [Ricinus commu...    76   3e-12
ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...    75   4e-12
ref|XP_004166307.1| PREDICTED: RING finger and CHY zinc finger d...    74   1e-11
ref|XP_004145767.1| PREDICTED: RING finger and CHY zinc finger d...    74   1e-11

>ref|XP_002314304.1| predicted protein [Populus trichocarpa] gi|222850712|gb|EEE88259.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/52 (61%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   NCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFK*VFFYNCQMNSNAL 157
           NCPVCFE+LFD+M+DI+VL CGHTIHL+CLKEME H++    Y+C + S ++
Sbjct: 166 NCPVCFEFLFDTMRDITVLPCGHTIHLECLKEMEQHYR----YSCPVCSKSI 213


>ref|XP_002523718.1| zinc finger protein, putative [Ricinus communis]
           gi|223537022|gb|EEF38658.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 275

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 31/52 (59%), Positives = 43/52 (82%)
 Frame = +2

Query: 2   NCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFK*VFFYNCQMNSNAL 157
           NCPVCFE+LFD+MKDI+VL CGHTIHL+C++EME H++    Y+C + S ++
Sbjct: 150 NCPVCFEFLFDTMKDITVLPCGHTIHLECVREMEQHYR----YSCPVCSKSI 197


>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +2

Query: 2   NCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFK*VFFYNCQMNSNA 154
           NCPVCFEYLFD+  DI+VL CGHTIHL+CLKEME HF+    Y+C + S +
Sbjct: 165 NCPVCFEYLFDTTTDITVLHCGHTIHLECLKEMERHFQ----YSCPVCSKS 211


>ref|XP_004166307.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Cucumis sativus]
          Length = 303

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   NCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFK*VFFYNCQMNSNAL 157
           +CPVCFE+LFD+ KDISVL CGHTIHL+C KEME HF+    Y+C + S ++
Sbjct: 176 SCPVCFEFLFDTTKDISVLPCGHTIHLECAKEMESHFQ----YSCPVCSKSI 223


>ref|XP_004145767.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Cucumis sativus]
          Length = 303

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   NCPVCFEYLFDSMKDISVLQCGHTIHLDCLKEMEMHFK*VFFYNCQMNSNAL 157
           +CPVCFE+LFD+ KDISVL CGHTIHL+C KEME HF+    Y+C + S ++
Sbjct: 176 SCPVCFEFLFDTTKDISVLPCGHTIHLECAKEMESHFQ----YSCPVCSKSI 223


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