BLASTX nr result

ID: Coptis25_contig00022106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022106
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|22...    62   4e-08
ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methy...    61   1e-07
ref|XP_003519346.1| PREDICTED: ribosomal RNA large subunit methy...    59   3e-07
ref|NP_850319.1| radical SAM domain-containing protein [Arabidop...    59   4e-07
ref|XP_003544231.1| PREDICTED: ribosomal RNA large subunit methy...    59   4e-07

>ref|XP_002533149.1| catalytic, putative [Ricinus communis] gi|223527044|gb|EEF29230.1|
           catalytic, putative [Ricinus communis]
          Length = 420

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = -1

Query: 206 KVGFQLRCSFCATGKGGYSRNLKRHEIVEQVI 111
           +VG  LRCSFCATGKGGYSRNLKRHEIVEQV+
Sbjct: 167 QVGCPLRCSFCATGKGGYSRNLKRHEIVEQVL 198


>ref|XP_002283725.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
           vinifera] gi|296086245|emb|CBI31686.3| unnamed protein
           product [Vitis vinifera]
          Length = 407

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = -1

Query: 206 KVGFQLRCSFCATGKGGYSRNLKRHEIVEQVI 111
           +VG  LRCSFCATGKGGYSRNL+RHEIVEQV+
Sbjct: 154 QVGCPLRCSFCATGKGGYSRNLQRHEIVEQVL 185


>ref|XP_003519346.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
           [Glycine max]
          Length = 416

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -1

Query: 206 KVGFQLRCSFCATGKGGYSRNLKRHEIVEQVI 111
           +VG  LRCSFCATGKGG+SRNL+RHEIVEQV+
Sbjct: 156 QVGCPLRCSFCATGKGGFSRNLQRHEIVEQVL 187


>ref|NP_850319.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|330254611|gb|AEC09705.1| radical SAM
           domain-containing protein [Arabidopsis thaliana]
          Length = 431

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -1

Query: 206 KVGFQLRCSFCATGKGGYSRNLKRHEIVEQVI 111
           +VG  LRCSFCATGKGG+SRNL+RHEI+EQV+
Sbjct: 177 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVL 208


>ref|XP_003544231.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
           [Glycine max]
          Length = 416

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = -1

Query: 206 KVGFQLRCSFCATGKGGYSRNLKRHEIVEQVI 111
           +VG  LRCSFCATGKGG+SRNL+RHEI+EQV+
Sbjct: 156 QVGCPLRCSFCATGKGGFSRNLQRHEIIEQVL 187


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