BLASTX nr result

ID: Coptis25_contig00022092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022092
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593890.1| ABC transporter C family member [Medicago tr...   164   5e-39
ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2...   161   5e-38
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   161   6e-38
ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2...   160   1e-37
ref|XP_002305657.1| multidrug resistance protein ABC transporter...   159   2e-37

>ref|XP_003593890.1| ABC transporter C family member [Medicago truncatula]
           gi|355482938|gb|AES64141.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1712

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/113 (66%), Positives = 90/113 (79%)
 Frame = -2

Query: 340 PLEWYCKPVENGAWTRVANNAFGAYTPCGVDTLVICISHFVLLGLCLHRIWKIINKDFKV 161
           PL WYC+PVENG WTR   NAFGAYTPC VD+LVI ISH V+LGLC++RIW +I KDF V
Sbjct: 5   PLVWYCQPVENGVWTRTVQNAFGAYTPCAVDSLVIGISHLVILGLCIYRIW-LIQKDFSV 63

Query: 160 KRFRLKSNIFTYLLGLFAFYSTVEPLCRLLMKYSIFNLDGQTSLAPFEIVSLL 2
           KRFRL+SN++ Y+LG+ A Y   EPL RL+M  S+ NLDGQ+ LAPFEI SL+
Sbjct: 64  KRFRLRSNVYNYVLGVLAAYCVAEPLYRLIMGVSVLNLDGQSQLAPFEITSLI 116


>ref|XP_003542944.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  161 bits (408), Expect = 5e-38
 Identities = 72/113 (63%), Positives = 89/113 (78%)
 Frame = -2

Query: 340 PLEWYCKPVENGAWTRVANNAFGAYTPCGVDTLVICISHFVLLGLCLHRIWKIINKDFKV 161
           PL+WYC+PV NG WTR   NAFGAYTPC VD+LVI +S+ +LLGLC++RIW +I KDF V
Sbjct: 5   PLDWYCRPVANGVWTRSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIW-LIKKDFTV 63

Query: 160 KRFRLKSNIFTYLLGLFAFYSTVEPLCRLLMKYSIFNLDGQTSLAPFEIVSLL 2
           KRF L+SN++ Y+LGL A Y   EPL RL++  S+ NLDGQT  APFEIVSL+
Sbjct: 64  KRFHLRSNLYNYILGLLALYCVAEPLYRLILGISVLNLDGQTQFAPFEIVSLI 116


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
           vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
           product [Vitis vinifera]
          Length = 1623

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/114 (64%), Positives = 88/114 (77%)
 Frame = -2

Query: 343 GPLEWYCKPVENGAWTRVANNAFGAYTPCGVDTLVICISHFVLLGLCLHRIWKIINKDFK 164
           GPL WYC+PV NG W ++ +NAFG YTPC  DTLVI ISHF+LL LC +RIW+ I KDFK
Sbjct: 4   GPLVWYCRPVTNGVWAKLVDNAFGVYTPCATDTLVISISHFILLSLCFYRIWR-IKKDFK 62

Query: 163 VKRFRLKSNIFTYLLGLFAFYSTVEPLCRLLMKYSIFNLDGQTSLAPFEIVSLL 2
           V+RF L+SN + Y+L L A Y T EPL RL+M  S+FNLDGQ  LAPFE+VSL+
Sbjct: 63  VQRFCLRSNYYNYMLALLAGYCTAEPLFRLIMGISVFNLDGQAGLAPFEVVSLI 116


>ref|XP_003546076.1| PREDICTED: ABC transporter C family member 2-like [Glycine max]
          Length = 1620

 Score =  160 bits (404), Expect = 1e-37
 Identities = 72/113 (63%), Positives = 89/113 (78%)
 Frame = -2

Query: 340 PLEWYCKPVENGAWTRVANNAFGAYTPCGVDTLVICISHFVLLGLCLHRIWKIINKDFKV 161
           PL WYC+PV NG WT+   NAFGAYTPC VD+LVI +S+ +LLGLC++RIW +I KDF V
Sbjct: 5   PLNWYCRPVANGVWTKSVENAFGAYTPCAVDSLVISVSNLILLGLCIYRIW-LIMKDFTV 63

Query: 160 KRFRLKSNIFTYLLGLFAFYSTVEPLCRLLMKYSIFNLDGQTSLAPFEIVSLL 2
           KRF L+SN++ Y+LGL A Y   EPL RL+M  S+ NLDGQT LAPFEI+SL+
Sbjct: 64  KRFCLRSNLYNYILGLLALYCVAEPLYRLIMGISVLNLDGQTQLAPFEIISLI 116


>ref|XP_002305657.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222848621|gb|EEE86168.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1607

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/112 (62%), Positives = 90/112 (80%)
 Frame = -2

Query: 337 LEWYCKPVENGAWTRVANNAFGAYTPCGVDTLVICISHFVLLGLCLHRIWKIINKDFKVK 158
           L WYC+P+ NG W +  +NAFGAYTPC +D++VICISH VLLGLCL+RIW II+ + KV+
Sbjct: 6   LVWYCRPMANGVWAKEVDNAFGAYTPCAIDSIVICISHLVLLGLCLYRIWLIIDNNTKVQ 65

Query: 157 RFRLKSNIFTYLLGLFAFYSTVEPLCRLLMKYSIFNLDGQTSLAPFEIVSLL 2
           ++ L++N + Y+LG  A Y TV+PL RL M  SIFNLDGQTSLAPFE+VSL+
Sbjct: 66  KYCLRTNYYNYMLGFLAAYCTVQPLLRLFMDVSIFNLDGQTSLAPFELVSLI 117


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