BLASTX nr result

ID: Coptis25_contig00022091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022091
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              327   3e-87
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   327   3e-87
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   317   2e-84
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]   317   2e-84
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   314   2e-83

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  327 bits (837), Expect = 3e-87
 Identities = 156/210 (74%), Positives = 180/210 (85%)
 Frame = -1

Query: 848 DSLESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYIY 669
           D LES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   Y+Y
Sbjct: 117 DGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVY 176

Query: 668 HSLYRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVE 489
           HS+Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+G +LQLEVE
Sbjct: 177 HSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVE 236

Query: 488 GSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKY 309
           GSGFLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKY
Sbjct: 237 GSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKY 296

Query: 308 DEELLEPPSCCPTTSFGRHSSISKCKLPFY 219
           +EE L+ PS CP TS GRH ++ KCKLPFY
Sbjct: 297 NEEHLQLPSGCPATSHGRHHTVRKCKLPFY 326


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  327 bits (837), Expect = 3e-87
 Identities = 156/210 (74%), Positives = 180/210 (85%)
 Frame = -1

Query: 848 DSLESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYIY 669
           D LES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   Y+Y
Sbjct: 127 DGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYNDAVMDPFLRHYVY 186

Query: 668 HSLYRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVE 489
           HS+Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+G +LQLEVE
Sbjct: 187 HSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMGALLQLEVE 246

Query: 488 GSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKY 309
           GSGFLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LSAPPHGLCLMSVKY
Sbjct: 247 GSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPHGLCLMSVKY 306

Query: 308 DEELLEPPSCCPTTSFGRHSSISKCKLPFY 219
           +EE L+ PS CP TS GRH ++ KCKLPFY
Sbjct: 307 NEEHLQLPSGCPATSHGRHHTVRKCKLPFY 336


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score =  317 bits (813), Expect = 2e-84
 Identities = 152/211 (72%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
 Frame = -1

Query: 848 DSLESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYIY 669
           D+LE LHAALNG+LP+DIRVREISPA  EFHARFSA  KIYHYKIYND IMDPFQ  + Y
Sbjct: 98  DNLEELHAALNGLLPTDIRVREISPASAEFHARFSAISKIYHYKIYNDAIMDPFQRHFAY 157

Query: 668 HSLYRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVE 489
           HS+Y+LN++ MREAAKYFVG+HDFS+F+NAS       PVKH+ RFD+ E+G +LQ+EVE
Sbjct: 158 HSVYKLNSAVMREAAKYFVGKHDFSAFANASNNDGVPDPVKHVFRFDLKEMGALLQIEVE 217

Query: 488 GSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKY 309
           GSGFLYRQVRNMVALLLQIG+EA+PPDIVP IL S+DRK LAKY+LSAPPHGLCL+S+ Y
Sbjct: 218 GSGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLSAPPHGLCLVSINY 277

Query: 308 DE-ELLEPPSCCPTTSFGRHSSISKCKLPFY 219
           +E  LL PP C P  SFGRH +I KCK+PF+
Sbjct: 278 NESHLLPPPGCPPANSFGRHHTIRKCKVPFF 308


>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
          Length = 403

 Score =  317 bits (812), Expect = 2e-84
 Identities = 156/223 (69%), Positives = 180/223 (80%), Gaps = 13/223 (5%)
 Frame = -1

Query: 848 DSLESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYIY 669
           D LES+HAALNG+LP DIRVREISPA+PEFHARFS + KIYHYKIYND +MDPF   Y+Y
Sbjct: 181 DGLESIHAALNGLLPPDIRVREISPAVPEFHARFSXKSKIYHYKIYNDAVMDPFLRHYVY 240

Query: 668 HSLYRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNEL--------- 516
           HS+Y+LN  AMREAAK+F G+HDFS+F NAS   R  +PVK+I RFDVNE+         
Sbjct: 241 HSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDVNEMMFLELIVNC 300

Query: 515 ----GPILQLEVEGSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLS 348
               G +LQLEVEGSGFLYRQVRNMVALLLQIG+EA+PP+IVP IL ++DRK LAKY LS
Sbjct: 301 IIAQGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALS 360

Query: 347 APPHGLCLMSVKYDEELLEPPSCCPTTSFGRHSSISKCKLPFY 219
           APPHGLCLMSVKY+EE L+ PS CP TS GRH ++ KCKLPFY
Sbjct: 361 APPHGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 403


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 327

 Score =  314 bits (804), Expect = 2e-83
 Identities = 150/211 (71%), Positives = 177/211 (83%), Gaps = 1/211 (0%)
 Frame = -1

Query: 848 DSLESLHAALNGILPSDIRVREISPALPEFHARFSAERKIYHYKIYNDTIMDPFQCRYIY 669
           D+LE LHAALNG+LP+DIR+REISPA  EFHARFSA+ KIYHYKIYND IMDPFQ  + Y
Sbjct: 116 DNLEQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYHYKIYNDAIMDPFQRHFAY 175

Query: 668 HSLYRLNASAMREAAKYFVGEHDFSSFSNASKEGRPRSPVKHICRFDVNELGPILQLEVE 489
           HS+Y+LN++ MREAA YFVG+HDFS+F+NAS   R   PVKH+ RFD+ E+G +LQLEVE
Sbjct: 176 HSVYKLNSAVMREAATYFVGKHDFSAFANASHNDRVPDPVKHVFRFDLKEMGALLQLEVE 235

Query: 488 GSGFLYRQVRNMVALLLQIGKEAVPPDIVPMILDSQDRKVLAKYTLSAPPHGLCLMSVKY 309
           GSGFLYRQVRNMVALLLQIG+EA+PPDIVP IL S+DRK LAKY+L APPHGLCL+S+ Y
Sbjct: 236 GSGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLPAPPHGLCLVSINY 295

Query: 308 DE-ELLEPPSCCPTTSFGRHSSISKCKLPFY 219
           +E  LL PP   P  SFGRH +I KCK+PF+
Sbjct: 296 NESHLLPPPESPPANSFGRHQTIRKCKVPFF 326


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