BLASTX nr result
ID: Coptis25_contig00022090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022090 (694 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26017.3| unnamed protein product [Vitis vinifera] 80 4e-13 ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 80 4e-13 emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera] 80 4e-13 ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|2... 76 7e-12 ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l... 74 2e-11 >emb|CBI26017.3| unnamed protein product [Vitis vinifera] Length = 326 Score = 80.1 bits (196), Expect = 4e-13 Identities = 39/47 (82%), Positives = 41/47 (87%) Frame = +2 Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694 GWQYQQS TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ Sbjct: 60 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 106 >ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera] Length = 336 Score = 80.1 bits (196), Expect = 4e-13 Identities = 39/47 (82%), Positives = 41/47 (87%) Frame = +2 Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694 GWQYQQS TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ Sbjct: 70 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 116 >emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera] Length = 403 Score = 80.1 bits (196), Expect = 4e-13 Identities = 39/47 (82%), Positives = 41/47 (87%) Frame = +2 Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694 GWQYQQS TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ Sbjct: 124 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 170 >ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|222852581|gb|EEE90128.1| predicted protein [Populus trichocarpa] Length = 232 Score = 75.9 bits (185), Expect = 7e-12 Identities = 36/47 (76%), Positives = 41/47 (87%) Frame = +2 Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694 GWQ+QQ+ TIQ I+EKALTRAT+LER +L LVGASRTD GVHAWGQ Sbjct: 72 GWQFQQTPPTIQCILEKALTRATKLERKDLHLVGASRTDGGVHAWGQ 118 >ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max] Length = 309 Score = 74.3 bits (181), Expect = 2e-11 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = +2 Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694 GWQYQQS T+Q +EKALTRAT+L+R + LVGASRTD GVHAWGQ Sbjct: 41 GWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGVHAWGQ 87