BLASTX nr result

ID: Coptis25_contig00022090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022090
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]               80   4e-13
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...    80   4e-13
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]    80   4e-13
ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|2...    76   7e-12
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...    74   2e-11

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +2

Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ
Sbjct: 60  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 106


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +2

Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ
Sbjct: 70  GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 116


>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
          Length = 403

 Score = 80.1 bits (196), Expect = 4e-13
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +2

Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694
           GWQYQQS  TIQ IVEKALTRAT+LER +L LVGASRTD GVHAWGQ
Sbjct: 124 GWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAWGQ 170


>ref|XP_002312761.1| predicted protein [Populus trichocarpa] gi|222852581|gb|EEE90128.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 36/47 (76%), Positives = 41/47 (87%)
 Frame = +2

Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694
           GWQ+QQ+  TIQ I+EKALTRAT+LER +L LVGASRTD GVHAWGQ
Sbjct: 72  GWQFQQTPPTIQCILEKALTRATKLERKDLHLVGASRTDGGVHAWGQ 118


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +2

Query: 554 GWQYQQSSATIQGIVEKALTRATRLERGELTLVGASRTDKGVHAWGQ 694
           GWQYQQS  T+Q  +EKALTRAT+L+R +  LVGASRTD GVHAWGQ
Sbjct: 41  GWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGVHAWGQ 87


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