BLASTX nr result

ID: Coptis25_contig00022089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022089
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307486.1| predicted protein [Populus trichocarpa] gi|2...    53   1e-07
ref|XP_002526129.1| kinase, putative [Ricinus communis] gi|22353...    51   1e-06

>ref|XP_002307486.1| predicted protein [Populus trichocarpa] gi|222856935|gb|EEE94482.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 52.8 bits (125), Expect(3) = 1e-07
 Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
 Frame = +2

Query: 122 YAH-GFATSNGQLGSARHLLQSWQFKTYRLHSSLTNNDRGEEDDNECSTCLADINLIYTD 298
           Y H GF+ SNGQ GSA H++  W+FKTY   SS+T  D  ++ D  C  C  + N +Y  
Sbjct: 224 YMHVGFSASNGQ-GSAVHIVDHWRFKTYATLSSVTPRDTSDKGD--CLMCYPE-NPMYNY 279

Query: 299 FHVQQ---RRKTSKAGDFXXXXXXXXXXXXXXSIVVIGFWFRWHRSIEGHSRTQEIV*SL 469
               Q   ++K  +                    V+I F  +  + + G ++   I   +
Sbjct: 280 GPGTQNGWKKKLLEMALGLGGLAAFTVSLIVVLFVIIFFAIKKGKGVGGRTKEGRIN-RV 338

Query: 470 PTRILLFEKKAATRGFNRKRICI*GVP------QIKSVNEVAIKSYSQ 595
           P R+ + E + AT GF+R RI   G         + S   VA+K + Q
Sbjct: 339 PRRLSITEIRTATMGFHRSRIIGQGASATVFKGYLSSCGSVAVKRFDQ 386



 Score = 25.4 bits (54), Expect(3) = 1e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 48  HVQFKPPDPIQSVYIGLSEPVVKEFMHM 131
           + Q +PP PI    + LSE   KE+MH+
Sbjct: 201 YFQVRPPSPILVAQVDLSEH-FKEYMHV 227



 Score = 23.1 bits (48), Expect(3) = 1e-07
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 654 HLVQLLGWCSKG 689
           +LVQL GWC +G
Sbjct: 411 NLVQLQGWCCEG 422


>ref|XP_002526129.1| kinase, putative [Ricinus communis] gi|223534506|gb|EEF36205.1|
           kinase, putative [Ricinus communis]
          Length = 696

 Score = 51.2 bits (121), Expect(3) = 1e-06
 Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
 Frame = +2

Query: 131 GFATSNGQLGSARHLLQSWQFKTYRLHSSLTNNDRGEEDDNECSTCLADINLIYTDFHVQ 310
           GF  SNGQ GSA HL+  W+FKTY    + TN    E +D  C  C  + +    D    
Sbjct: 245 GFTASNGQ-GSAVHLIDHWRFKTYWSAPAATNVQASEGED--CFLCYLEDSSENGD-PTN 300

Query: 311 QRRKTSKAGDFXXXXXXXXXXXXXXSI---VVIGFWFRWHRSIEGHSRTQE----IV*SL 469
              KT+K  +               ++   ++  F  R  R + G  RT+E    I    
Sbjct: 301 LDEKTNKMKEIALGLGGLAAFILSIALILAIIFLFVIRKKRVVFGR-RTKEGQFFIHKGG 359

Query: 470 PTRILLFEKKAATRGFNRKRICI*GVP------QIKSVNEVAIKSYSQISQLGPFSDPIT 631
           PTR  + E KAAT GF+R RI   G         +  +  VA+K +++ +++    +P  
Sbjct: 360 PTRFSIVEIKAATMGFHRNRIIGEGASATVYKGSLPDLGAVAVKRFNK-TEIECCRNPFI 418

Query: 632 NELALV 649
            E A +
Sbjct: 419 TEFATI 424



 Score = 26.2 bits (56), Expect(3) = 1e-06
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 54  QFKPPDPIQSVYIGLSEPVVKEFMHM 131
           Q +PP+PI    + LSE   KEFMH+
Sbjct: 220 QNRPPNPILEARVDLSEN-FKEFMHV 244



 Score = 20.8 bits (42), Expect(3) = 1e-06
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 654 HLVQLLGWC 680
           +LVQL GWC
Sbjct: 432 NLVQLQGWC 440


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